RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 E9PBE3 544 aa11.06□□□□□ -0.64
ABCF1-205ENST00000475993 SPECC1L-ADORA2AF8WAN1 911 aa11.06□□□□□ -0.64
ABCF1-205ENST00000475993 MGEA5O60502 916 aa11.06□□□□□ -0.64
ABCF1-205ENST00000475993 RSPH10BP0C881 870 aa11.06□□□□□ -0.64
ABCF1-205ENST00000475993 TRIM49P0CI25 452 aa11.06□□□□□ -0.64
ABCF1-205ENST00000475993 TRIM49CP0CI26 452 aa11.06□□□□□ -0.64
ABCF1-205ENST00000475993 PEX2P28328 305 aa11.06□□□□□ -0.64
ABCF1-205ENST00000475993 PCSK6P29122 969 aa11.06□□□□□ -0.64
ABCF1-205ENST00000475993 SLC1A1P43005 524 aa11.06□□□□□ -0.64
ABCF1-205ENST00000475993 CYTH1Q15438 398 aa11.06□□□□□ -0.64
ABCF1-205ENST00000475993 CCNG2Q16589 344 aa11.06□□□□□ -0.64
ABCF1-205ENST00000475993 UBE2SQ16763 222 aa11.06□□□□□ -0.64
ABCF1-205ENST00000475993 SHROOM1Q2M3G4 852 aaPredicted RBP11.06□□□□□ -0.64
ABCF1-205ENST00000475993 EFHC2Q5JST6 749 aa11.06□□□□□ -0.64
ABCF1-205ENST00000475993 FAM209AQ5JX71 171 aa11.06□□□□□ -0.64
ABCF1-205ENST00000475993 C3orf62Q6ZUJ4 267 aa11.06□□□□□ -0.64
ABCF1-205ENST00000475993 CATSPER3Q86XQ3 398 aa11.06□□□□□ -0.64
ABCF1-205ENST00000475993 PASD1Q8IV76 773 aa11.06□□□□□ -0.64
ABCF1-205ENST00000475993 BBS5Q8N3I7 341 aa11.06□□□□□ -0.64
ABCF1-205ENST00000475993 MARVELD2Q8N4S9 558 aa11.06□□□□□ -0.64
ABCF1-205ENST00000475993 MZB1Q8WU39 189 aa11.06□□□□□ -0.64
ABCF1-205ENST00000475993 ZFRQ96KR1 1074 aaKnown RBP11.06□□□□□ -0.64
ABCF1-205ENST00000475993 PPP1R10Q96QC0 940 aaKnown RBP11.06□□□□□ -0.64
ABCF1-205ENST00000475993 ADAM33Q9BZ11 813 aa11.06□□□□□ -0.64
ABCF1-205ENST00000475993 SENP6Q9GZR1 1112 aaPredicted RBP11.06□□□□□ -0.64
ABCF1-205ENST00000475993 IKZF4Q9H2S9 585 aa11.06□□□□□ -0.64
ABCF1-205ENST00000475993 C12orf65Q9H3J6 166 aaKnown RBP11.06□□□□□ -0.64
ABCF1-205ENST00000475993 BCAS3Q9H6U6 928 aa11.06□□□□□ -0.64
ABCF1-205ENST00000475993 TMOD3Q9NYL9 352 aa11.06□□□□□ -0.64
ABCF1-205ENST00000475993 PLK2Q9NYY3 685 aa11.06□□□□□ -0.64
ABCF1-205ENST00000475993 TAGLN3Q9UI15 199 aa11.06□□□□□ -0.64
ABCF1-205ENST00000475993 NOCTQ9UK39 431 aaKnown RBP11.06□□□□□ -0.64
ABCF1-205ENST00000475993 CTDP1Q9Y5B0 961 aaPredicted RBP11.06□□□□□ -0.64
ABCF1-205ENST00000475993 LAMB2P55268 1798 aa11.05□□□□□ -0.64
ABCF1-205ENST00000475993 ADAM23O75077 832 aa11.05□□□□□ -0.64
ABCF1-205ENST00000475993 TKTP29401 623 aaKnown RBP11.05□□□□□ -0.64
ABCF1-205ENST00000475993 PRDX5P30044 214 aa11.05□□□□□ -0.64
ABCF1-205ENST00000475993 MYLK3Q32MK0 819 aa11.05□□□□□ -0.64
ABCF1-205ENST00000475993 BORAQ6PGQ7 559 aa11.05□□□□□ -0.64
ABCF1-205ENST00000475993 PATL1Q86TB9 770 aaKnown RBP11.05□□□□□ -0.64
ABCF1-205ENST00000475993 GDPD5Q8WTR4 605 aa11.05□□□□□ -0.64
ABCF1-205ENST00000475993 PYDC1Q8WXC3 89 aa11.05□□□□□ -0.64
ABCF1-205ENST00000475993 VTI1AQ96AJ9 217 aa11.05□□□□□ -0.64
ABCF1-205ENST00000475993 ALKBH8Q96BT7 664 aaKnown RBP11.05□□□□□ -0.64
ABCF1-205ENST00000475993 CEP44Q9C0F1 390 aa11.05□□□□□ -0.64
ABCF1-205ENST00000475993 VPS37BQ9H9H4 285 aa11.05□□□□□ -0.64
ABCF1-205ENST00000475993 OLFML3Q9NRN5 406 aa11.05□□□□□ -0.64
ABCF1-205ENST00000475993 FETUBQ9UGM5 382 aa11.05□□□□□ -0.64
ABCF1-205ENST00000475993 SAP30BPQ9UHR5 308 aaKnown RBP11.05□□□□□ -0.64
ABCF1-205ENST00000475993 GPC6Q9Y625 555 aaPredicted RBP11.05□□□□□ -0.64
ABCF1-205ENST00000475993 A0A088AWK7 358 aa11.05□□□□□ -0.64
ABCF1-205ENST00000475993 ALOX15BO15296 676 aa11.05□□□□□ -0.64
ABCF1-205ENST00000475993 PEX1O43933 1283 aa11.05□□□□□ -0.64
ABCF1-205ENST00000475993 CYP19A1P11511 503 aaPredicted RBP11.05□□□□□ -0.64
ABCF1-205ENST00000475993 SLC5A2P31639 672 aa11.05□□□□□ -0.64
ABCF1-205ENST00000475993 STAT3P40763 770 aa11.05□□□□□ -0.64
ABCF1-205ENST00000475993 FOLH1Q04609 750 aa11.05□□□□□ -0.64
ABCF1-205ENST00000475993 NCOA4Q13772 614 aa11.05□□□□□ -0.64
ABCF1-205ENST00000475993 GPR162Q16538 588 aa11.05□□□□□ -0.64
ABCF1-205ENST00000475993 CLEC16AQ2KHT3 1053 aa11.05□□□□□ -0.64
ABCF1-205ENST00000475993 Q6ZNX1 250 aa11.05□□□□□ -0.64
ABCF1-205ENST00000475993 ANO5Q75V66 913 aa11.05□□□□□ -0.64
ABCF1-205ENST00000475993 TMC7Q7Z402 723 aa11.05□□□□□ -0.64
ABCF1-205ENST00000475993 GSTCDQ8NEC7 633 aa11.05□□□□□ -0.64
ABCF1-205ENST00000475993 ETNPPLQ8TBG4 499 aa11.05□□□□□ -0.64
ABCF1-205ENST00000475993 EPS8L1Q8TE68 723 aa11.05□□□□□ -0.64
ABCF1-205ENST00000475993 CGREF1Q99674 301 aa11.05□□□□□ -0.64
ABCF1-205ENST00000475993 MRPL46Q9H2W6 279 aaKnown RBP11.05□□□□□ -0.64
ABCF1-205ENST00000475993 ALG13Q9NP73 1137 aaKnown RBP11.05□□□□□ -0.64
ABCF1-205ENST00000475993 UBE2TQ9NPD8 197 aaPredicted RBP11.05□□□□□ -0.64
ABCF1-205ENST00000475993 ZBTB1Q9Y2K1 713 aa11.05□□□□□ -0.64
ABCF1-205ENST00000475993 RBMX2Q9Y388 322 aaKnown RBP11.05□□□□□ -0.64
ABCF1-205ENST00000475993 NFASCO94856 1347 aa11.04□□□□□ -0.64
ABCF1-205ENST00000475993 SHANK3Q9BYB0 1731 aa11.04□□□□□ -0.64
ABCF1-205ENST00000475993 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.04□□□□□ -0.64
ABCF1-205ENST00000475993 FAM237BA0A1B0GVD1 139 aa11.04□□□□□ -0.64
ABCF1-205ENST00000475993 ARHGAP10A1A4S6 786 aa11.04□□□□□ -0.64
ABCF1-205ENST00000475993 DNALI1O14645 258 aaPredicted RBP11.04□□□□□ -0.64
ABCF1-205ENST00000475993 CASQ2O14958 399 aaPredicted RBP11.04□□□□□ -0.64
ABCF1-205ENST00000475993 EIF3DO15371 548 aaKnown RBP eCLIP11.04□□□□□ -0.64
ABCF1-205ENST00000475993 DENRO43583 198 aaKnown RBP11.04□□□□□ -0.64
ABCF1-205ENST00000475993 CSDE1O75534 798 aaKnown RBP11.04□□□□□ -0.64
ABCF1-205ENST00000475993 LDHCP07864 332 aa11.04□□□□□ -0.64
ABCF1-205ENST00000475993 PDIA2Q13087 525 aaKnown RBP11.04□□□□□ -0.64
ABCF1-205ENST00000475993 HSF5Q4G112 596 aaPredicted RBP11.04□□□□□ -0.64
ABCF1-205ENST00000475993 NSMFQ6X4W1 530 aa11.04□□□□□ -0.64
ABCF1-205ENST00000475993 FBXO33Q7Z6M2 555 aa11.04□□□□□ -0.64
ABCF1-205ENST00000475993 C11orf74Q86VG3 221 aa11.04□□□□□ -0.64
ABCF1-205ENST00000475993 RIN3Q8TB24 985 aa11.04□□□□□ -0.64
ABCF1-205ENST00000475993 MRRFQ96E11 262 aaKnown RBP11.04□□□□□ -0.64
ABCF1-205ENST00000475993 UIMC1Q96RL1 719 aa11.04□□□□□ -0.64
ABCF1-205ENST00000475993 DHRS4Q9BTZ2 278 aa11.04□□□□□ -0.64
ABCF1-205ENST00000475993 MRPS26Q9BYN8 205 aaKnown RBP11.04□□□□□ -0.64
ABCF1-205ENST00000475993 ACP6Q9NPH0 428 aa11.04□□□□□ -0.64
ABCF1-205ENST00000475993 DMAC2Q9NW81 257 aa11.04□□□□□ -0.64
ABCF1-205ENST00000475993 KCNK4Q9NYG8 393 aa11.04□□□□□ -0.64
ABCF1-205ENST00000475993 FAF1Q9UNN5 650 aaPredicted RBP11.04□□□□□ -0.64
ABCF1-205ENST00000475993 DNM3Q9UQ16 869 aa11.04□□□□□ -0.64
ABCF1-205ENST00000475993 LZTS1Q9Y250 596 aa11.04□□□□□ -0.64
ABCF1-205ENST00000475993 TTLL3Q9Y4R7 772 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms