RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 LRRC1Q9BTT6 524 aa12.51□□□□□ -0.41
SMCR8-201ENST00000406438 TRIM9Q9C026 710 aa12.51□□□□□ -0.41
SMCR8-201ENST00000406438 FAM49BQ9NUQ9 324 aa12.51□□□□□ -0.41
SMCR8-201ENST00000406438 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.51□□□□□ -0.41
SMCR8-201ENST00000406438 KIF1CO43896 1103 aaKnown RBP12.51□□□□□ -0.41
SMCR8-201ENST00000406438 GAS2O43903 313 aaKnown RBP12.51□□□□□ -0.41
SMCR8-201ENST00000406438 ATP6V1C1P21283 382 aa12.51□□□□□ -0.41
SMCR8-201ENST00000406438 SOX11P35716 441 aa12.51□□□□□ -0.41
SMCR8-201ENST00000406438 PTGER2P43116 358 aa12.51□□□□□ -0.41
SMCR8-201ENST00000406438 HSPA13P48723 471 aa12.51□□□□□ -0.41
SMCR8-201ENST00000406438 ATXN3P54252 364 aaPredicted RBP12.51□□□□□ -0.41
SMCR8-201ENST00000406438 PRKCEQ02156 737 aa12.51□□□□□ -0.41
SMCR8-201ENST00000406438 ZNF177Q13360 481 aaPredicted RBP12.51□□□□□ -0.41
SMCR8-201ENST00000406438 PLA2G4FQ68DD2 849 aa12.51□□□□□ -0.41
SMCR8-201ENST00000406438 OTOAQ7RTW8 1153 aa12.51□□□□□ -0.41
SMCR8-201ENST00000406438 TUBGCP3Q96CW5 907 aa12.51□□□□□ -0.41
SMCR8-201ENST00000406438 ITIH6Q6UXX5 1313 aa12.51□□□□□ -0.41
SMCR8-201ENST00000406438 ERVK-10P10266 1014 aa12.51□□□□□ -0.41
SMCR8-201ENST00000406438 COPS7BQ9H9Q2 264 aaPredicted RBP12.51□□□□□ -0.41
SMCR8-201ENST00000406438 ARHGEF3Q9NR81 526 aa12.51□□□□□ -0.41
SMCR8-201ENST00000406438 CHMP2BQ9UQN3 213 aa12.51□□□□□ -0.41
SMCR8-201ENST00000406438 V9GYQ6 96 aa12.51□□□□□ -0.41
SMCR8-201ENST00000406438 E2F8A0AVK6 867 aa12.51□□□□□ -0.41
SMCR8-201ENST00000406438 H7C4K7 107 aa12.51□□□□□ -0.41
SMCR8-201ENST00000406438 USP1O94782 785 aa12.51□□□□□ -0.41
SMCR8-201ENST00000406438 FDFT1P37268 417 aa12.51□□□□□ -0.41
SMCR8-201ENST00000406438 CDC16Q13042 620 aa12.51□□□□□ -0.41
SMCR8-201ENST00000406438 FAM117BQ6P1L5 589 aa12.51□□□□□ -0.41
SMCR8-201ENST00000406438 CHSY1Q86X52 802 aa12.51□□□□□ -0.41
SMCR8-201ENST00000406438 IL17RAQ96F46 866 aa12.51□□□□□ -0.41
SMCR8-201ENST00000406438 ZNF333Q96JL9 665 aa12.51□□□□□ -0.41
SMCR8-201ENST00000406438 THUMPD3Q9BV44 507 aaKnown RBP12.51□□□□□ -0.41
SMCR8-201ENST00000406438 ZNRF3Q9ULT6 936 aa12.51□□□□□ -0.41
SMCR8-201ENST00000406438 E9PCH4 1651 aa12.51□□□□□ -0.41
SMCR8-201ENST00000406438 USP39Q53GS9 565 aaKnown RBP12.51□□□□□ -0.41
SMCR8-201ENST00000406438 C11orf74Q86VG3 221 aa12.51□□□□□ -0.41
SMCR8-201ENST00000406438 SRBD1Q8N5C6 995 aaKnown RBP12.51□□□□□ -0.41
SMCR8-201ENST00000406438 ASS1P00966 412 aaKnown RBP12.51□□□□□ -0.41
SMCR8-201ENST00000406438 GALCP54803 685 aa12.51□□□□□ -0.41
SMCR8-201ENST00000406438 NAB2Q15742 525 aa12.51□□□□□ -0.41
SMCR8-201ENST00000406438 AGBL2Q5U5Z8 902 aa12.51□□□□□ -0.41
SMCR8-201ENST00000406438 CCDC81Q6ZN84 652 aa12.51□□□□□ -0.41
SMCR8-201ENST00000406438 FAM9CQ8IZT9 166 aa12.51□□□□□ -0.41
SMCR8-201ENST00000406438 UCMAQ8WVF2 138 aa12.51□□□□□ -0.41
SMCR8-201ENST00000406438 OSBPL8Q9BZF1 889 aa12.51□□□□□ -0.41
SMCR8-201ENST00000406438 C10orf88Q9H8K7 445 aa12.51□□□□□ -0.41
SMCR8-201ENST00000406438 FLT1P17948 1338 aa12.5□□□□□ -0.41
SMCR8-201ENST00000406438 PNPLA7Q6ZV29 1317 aa12.5□□□□□ -0.41
SMCR8-201ENST00000406438 PKN2Q16513 984 aaKnown RBP12.5□□□□□ -0.41
SMCR8-201ENST00000406438 PPIL6Q8IXY8 311 aa12.5□□□□□ -0.41
SMCR8-201ENST00000406438 CCT8L2Q96SF2 557 aa12.5□□□□□ -0.41
SMCR8-201ENST00000406438 UTP6Q9NYH9 597 aaKnown RBP12.5□□□□□ -0.41
SMCR8-201ENST00000406438 VSNL1P62760 191 aa12.5□□□□□ -0.41
SMCR8-201ENST00000406438 LAMC2Q13753 1193 aa12.5□□□□□ -0.41
SMCR8-201ENST00000406438 MOV10L1Q9BXT6 1211 aaKnown RBP12.5□□□□□ -0.41
SMCR8-201ENST00000406438 ILKAPQ9H0C8 392 aaPredicted RBP12.5□□□□□ -0.41
SMCR8-201ENST00000406438 VIPAS39Q9H9C1 493 aa12.5□□□□□ -0.41
SMCR8-201ENST00000406438 NMRK2Q9NPI5 230 aa12.5□□□□□ -0.41
SMCR8-201ENST00000406438 MTMR4Q9NYA4 1195 aa12.5□□□□□ -0.41
SMCR8-201ENST00000406438 DCDC2Q9UHG0 476 aa12.5□□□□□ -0.41
SMCR8-201ENST00000406438 GGT7Q9UJ14 662 aa12.5□□□□□ -0.41
SMCR8-201ENST00000406438 AAR2Q9Y312 384 aaKnown RBP12.5□□□□□ -0.41
SMCR8-201ENST00000406438 SLC25A27O95847 323 aa12.5□□□□□ -0.41
SMCR8-201ENST00000406438 WEE2P0C1S8 567 aa12.5□□□□□ -0.41
SMCR8-201ENST00000406438 RPS6P62753 249 aaKnown RBP12.5□□□□□ -0.41
SMCR8-201ENST00000406438 CHI3L2Q15782 390 aa12.5□□□□□ -0.41
SMCR8-201ENST00000406438 GPAT2Q6NUI2 795 aa12.5□□□□□ -0.41
SMCR8-201ENST00000406438 FRMD8Q9BZ67 464 aaPredicted RBP12.5□□□□□ -0.41
SMCR8-201ENST00000406438 PAIP2BQ9ULR5 123 aaKnown RBP12.5□□□□□ -0.41
SMCR8-201ENST00000406438 HBP1O60381 514 aa12.5□□□□□ -0.41
SMCR8-201ENST00000406438 ERFP50548 548 aa12.5□□□□□ -0.41
SMCR8-201ENST00000406438 GEMIN4P57678 1058 aaKnown RBP12.5□□□□□ -0.41
SMCR8-201ENST00000406438 KBTBD12Q3ZCT8 623 aa12.5□□□□□ -0.41
SMCR8-201ENST00000406438 GALNTL6Q49A17 601 aa12.5□□□□□ -0.41
SMCR8-201ENST00000406438 RASGRP2Q7LDG7 609 aa12.5□□□□□ -0.41
SMCR8-201ENST00000406438 NEDD1Q8NHV4 660 aa12.5□□□□□ -0.41
SMCR8-201ENST00000406438 SEPT1Q8WYJ6 367 aa12.5□□□□□ -0.41
SMCR8-201ENST00000406438 XPO6Q96QU8 1125 aaKnown RBP12.5□□□□□ -0.41
SMCR8-201ENST00000406438 METTL5Q9NRN9 209 aaKnown RBP12.5□□□□□ -0.41
SMCR8-201ENST00000406438 SOX13Q9UN79 622 aa12.5□□□□□ -0.41
SMCR8-201ENST00000406438 PDS5AQ29RF7 1337 aaKnown RBP12.5□□□□□ -0.41
SMCR8-201ENST00000406438 BTKQ06187 659 aa12.5□□□□□ -0.41
SMCR8-201ENST00000406438 TIGD7Q6NT04 549 aaPredicted RBP12.5□□□□□ -0.41
SMCR8-201ENST00000406438 SHC4Q6S5L8 630 aa12.5□□□□□ -0.41
SMCR8-201ENST00000406438 FAR2Q96K12 515 aa12.5□□□□□ -0.41
SMCR8-201ENST00000406438 EMILIN2Q9BXX0 1053 aa12.5□□□□□ -0.41
SMCR8-201ENST00000406438 ROPN1BQ9BZX4 212 aaPredicted RBP12.5□□□□□ -0.41
SMCR8-201ENST00000406438 RMND5AQ9H871 391 aa12.5□□□□□ -0.41
SMCR8-201ENST00000406438 ROPN1Q9HAT0 212 aaPredicted RBP12.5□□□□□ -0.41
SMCR8-201ENST00000406438 ALKQ9UM73 1620 aa12.5□□□□□ -0.41
SMCR8-201ENST00000406438 SSU72P8A0A1W2PR75 194 aa12.5□□□□□ -0.41
SMCR8-201ENST00000406438 CYP4Z1Q86W10 505 aa12.5□□□□□ -0.41
SMCR8-201ENST00000406438 MMGT1Q8N4V1 131 aa12.5□□□□□ -0.41
SMCR8-201ENST00000406438 GPRC5AQ8NFJ5 357 aa12.5□□□□□ -0.41
SMCR8-201ENST00000406438 ZNF473Q8WTR7 871 aaKnown RBP12.5□□□□□ -0.41
SMCR8-201ENST00000406438 HACL1Q9UJ83 578 aa12.5□□□□□ -0.41
SMCR8-201ENST00000406438 IPPQ9Y573 584 aa12.5□□□□□ -0.41
SMCR8-201ENST00000406438 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.49□□□□□ -0.41
SMCR8-201ENST00000406438 ALFQ53S48 1182 aa12.49□□□□□ -0.41
SMCR8-201ENST00000406438 TFDP3Q5H9I0 405 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 154.7 ms