RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 GNG2P59768 71 aa7.96□□□□□ -1.14
VTI1A-201ENST00000393077 HP1BP3Q5SSJ5 553 aaPredicted RBP7.96□□□□□ -1.14
VTI1A-201ENST00000393077 OGFOD2Q6N063 350 aa7.96□□□□□ -1.14
VTI1A-201ENST00000393077 OXER1Q8TDS5 423 aa7.96□□□□□ -1.14
VTI1A-201ENST00000393077 WRNIP1Q96S55 665 aa7.96□□□□□ -1.14
VTI1A-201ENST00000393077 TAS2R1Q9NYW7 299 aa7.96□□□□□ -1.14
VTI1A-201ENST00000393077 NARFQ9UHQ1 456 aa7.96□□□□□ -1.14
VTI1A-201ENST00000393077 SOX13Q9UN79 622 aa7.96□□□□□ -1.14
VTI1A-201ENST00000393077 TTLL3Q9Y4R7 772 aa7.96□□□□□ -1.14
VTI1A-201ENST00000393077 SPATA31A5Q5VU36 1347 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 SPATA31A7Q8IWB4 1347 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 RNF103-CHMP3A0A140T963 221 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 UGT1A9O60656 530 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 EDF1O60869 148 aaKnown RBP7.95□□□□□ -1.14
VTI1A-201ENST00000393077 CAMTA2O94983 1202 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 UGT1A6P19224 532 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 UGT1A1P22309 533 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 UGT1A4P22310 534 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 UGT1A3P35503 534 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 UGT1A5P35504 534 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 PPM1LQ5SGD2 360 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 NXNQ6DKJ4 435 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 TTC23LQ6PF05 361 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 ATG14Q6ZNE5 492 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 CDR2LQ86X02 465 aaPredicted RBP7.95□□□□□ -1.14
VTI1A-201ENST00000393077 C18orf8Q96DM3 657 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 SNF8Q96H20 258 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 MED15Q96RN5 788 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 TMEM79Q9BSE2 394 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 CCSER1Q9C0I3 900 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 PSTPIP2Q9H939 334 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 UGT1A7Q9HAW7 530 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 UGT1A10Q9HAW8 530 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 UGT1A8Q9HAW9 530 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 USP29Q9HBJ7 922 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 PKD2L2Q9NZM6 624 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 NOX1Q9Y5S8 564 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 UTYO14607 1347 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 LOC100653049A0A140TA62 436 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 J3QRK9 145 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 LPXNO60711 386 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 KRT34O76011 436 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 TTC4O95801 387 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 CYP1A1P04798 512 aaPredicted RBP7.95□□□□□ -1.14
VTI1A-201ENST00000393077 CREB1P16220 341 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 ITIH2P19823 946 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 CRABP2P29373 138 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 GNA11P29992 359 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 LRPAP1P30533 357 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 MAPK10P53779 464 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 COPZ1P61923 177 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 CDK16Q00536 496 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 KRT17Q04695 432 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 TCP10Q12799 353 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 TIGD2Q4W5G0 525 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 KRT79Q5XKE5 535 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 RAPH1Q70E73 1250 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 TPCN2Q8NHX9 752 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 ZNF398Q8TD17 642 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 NRG4Q8WWG1 115 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 ZNF75CPQ92670 426 aaPredicted RBP7.95□□□□□ -1.14
VTI1A-201ENST00000393077 FBXL8Q96CD0 374 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 SHCBP1LQ9BZQ2 653 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 GPAMQ9HCL2 828 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 S100A14Q9HCY8 104 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 MYH8P13535 1937 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 ANKRD34BA5PLL1 514 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 FAM25AB3EWG3 89 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 FAM25CB3EWG5 89 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 FAM25GB3EWG6 89 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 M0R3G1 203 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 ATXN3P54252 364 aaPredicted RBP7.95□□□□□ -1.14
VTI1A-201ENST00000393077 ART3Q13508 389 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 E2F2Q14209 437 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 NONOQ15233 471 aaKnown RBP eCLIP7.95□□□□□ -1.14
VTI1A-201ENST00000393077 GEN1Q17RS7 908 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 SCARA3Q6AZY7 606 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 ADCK1Q86TW2 530 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 CCDC28AQ8IWP9 274 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 ALLCQ8N6M5 410 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 FANCBQ8NB91 859 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 LINC00116Q8NCU8 138 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 GSTCDQ8NEC7 633 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 OXNAD1Q96HP4 312 aaPredicted RBP7.95□□□□□ -1.14
VTI1A-201ENST00000393077 UQCC2Q9BRT2 126 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 PHF20Q9BVI0 1012 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 RPRD1BQ9NQG5 326 aaKnown RBP7.95□□□□□ -1.14
VTI1A-201ENST00000393077 STK32BQ9NY57 414 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 MINPP1Q9UNW1 487 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 NEU2Q9Y3R4 380 aa7.95□□□□□ -1.14
VTI1A-201ENST00000393077 COL5A2P05997 1499 aaPredicted RBP7.95□□□□□ -1.14
VTI1A-201ENST00000393077 H0YC42 278 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 H3BNX3 289 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 PSMD12O00232 456 aaPredicted RBP7.94□□□□□ -1.14
VTI1A-201ENST00000393077 SH2B2O14492 632 aaPredicted RBP7.94□□□□□ -1.14
VTI1A-201ENST00000393077 MTSS1O43312 755 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 TOM1L1O75674 476 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 BDNFP23560 247 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 RPL21P46778 160 aaKnown RBP7.94□□□□□ -1.14
VTI1A-201ENST00000393077 SCNN1DP51172 638 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms