RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 TKTP29401 623 aaKnown RBP18.61■□□□□ 0.57
PFDN6-201ENST00000374606 GTF2F1P35269 517 aaKnown RBP eCLIP18.61■□□□□ 0.577e-12■■■■□ 21.5
PFDN6-201ENST00000374606 CYLC1P35663 651 aaPredicted RBP18.61■□□□□ 0.57
PFDN6-201ENST00000374606 NDUFV1P49821 464 aa18.61■□□□□ 0.57
PFDN6-201ENST00000374606 YWHAHQ04917 246 aaPredicted RBP18.61■□□□□ 0.57
PFDN6-201ENST00000374606 MAPK8IP2Q13387 824 aaPredicted RBP18.61■□□□□ 0.57
PFDN6-201ENST00000374606 HS1BP3Q53T59 392 aa18.61■□□□□ 0.57
PFDN6-201ENST00000374606 FAM171A1Q5VUB5 890 aa18.61■□□□□ 0.57
PFDN6-201ENST00000374606 TAF3Q5VWG9 929 aa18.61■□□□□ 0.57
PFDN6-201ENST00000374606 OVOS1Q6IE37 1185 aa18.61■□□□□ 0.57
PFDN6-201ENST00000374606 ZNF571Q7Z3V5 609 aaPredicted RBP18.61■□□□□ 0.57
PFDN6-201ENST00000374606 SLC20A1Q8WUM9 679 aa18.61■□□□□ 0.57
PFDN6-201ENST00000374606 TNIP3Q96KP6 325 aa18.61■□□□□ 0.57
PFDN6-201ENST00000374606 PHOX2BQ99453 314 aa18.61■□□□□ 0.57
PFDN6-201ENST00000374606 PRRX2Q99811 253 aa18.61■□□□□ 0.57
PFDN6-201ENST00000374606 PLVAPQ9BX97 442 aa18.61■□□□□ 0.57
PFDN6-201ENST00000374606 GPR62Q9BZJ7 368 aa18.61■□□□□ 0.57
PFDN6-201ENST00000374606 NME7Q9Y5B8 376 aa18.61■□□□□ 0.57
PFDN6-201ENST00000374606 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.61■□□□□ 0.57
PFDN6-201ENST00000374606 ZDBF2Q9HCK1 2354 aa18.6■□□□□ 0.57
PFDN6-201ENST00000374606 TMEM221A6NGB7 291 aa18.6■□□□□ 0.57
PFDN6-201ENST00000374606 M0R296 226 aa18.6■□□□□ 0.57
PFDN6-201ENST00000374606 LINC01565O15544 149 aa18.6■□□□□ 0.57
PFDN6-201ENST00000374606 HCRTO43612 131 aa18.6■□□□□ 0.57
PFDN6-201ENST00000374606 CALCAP01258 141 aa18.6■□□□□ 0.57
PFDN6-201ENST00000374606 PDGFRBP09619 1106 aa18.6■□□□□ 0.57
PFDN6-201ENST00000374606 VDRP11473 427 aa18.6■□□□□ 0.57
PFDN6-201ENST00000374606 BRD2P25440 801 aaKnown RBP18.6■□□□□ 0.57
PFDN6-201ENST00000374606 PCSK1P29120 753 aa18.6■□□□□ 0.57
PFDN6-201ENST00000374606 KIF11P52732 1056 aa18.6■□□□□ 0.57
PFDN6-201ENST00000374606 CDR2Q01850 454 aa18.6■□□□□ 0.57
PFDN6-201ENST00000374606 TRIM67Q6ZTA4 783 aa18.6■□□□□ 0.57
PFDN6-201ENST00000374606 ACOT1Q86TX2 421 aa18.6■□□□□ 0.57
PFDN6-201ENST00000374606 CEP57Q86XR8 500 aa18.6■□□□□ 0.57
PFDN6-201ENST00000374606 ZNF677Q86XU0 584 aa18.6■□□□□ 0.57
PFDN6-201ENST00000374606 SUGP1Q8IWZ8 645 aaKnown RBP18.6■□□□□ 0.57
PFDN6-201ENST00000374606 CCDC170Q8IYT3 715 aa18.6■□□□□ 0.57
PFDN6-201ENST00000374606 THEM5Q8N1Q8 247 aa18.6■□□□□ 0.57
PFDN6-201ENST00000374606 AGPAT1Q99943 283 aa18.6■□□□□ 0.57
PFDN6-201ENST00000374606 SYT15Q9BQS2 421 aa18.6■□□□□ 0.57
PFDN6-201ENST00000374606 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.6■□□□□ 0.57
PFDN6-201ENST00000374606 PDCL3Q9H2J4 239 aa18.6■□□□□ 0.57
PFDN6-201ENST00000374606 DPEP3Q9H4B8 488 aa18.6■□□□□ 0.57
PFDN6-201ENST00000374606 SEPT11Q9NVA2 429 aaKnown RBP18.6■□□□□ 0.57
PFDN6-201ENST00000374606 MED7O43513 233 aa18.59■□□□□ 0.57
PFDN6-201ENST00000374606 IPO7O95373 1038 aaKnown RBP18.59■□□□□ 0.57
PFDN6-201ENST00000374606 TNFAIP3P21580 790 aa18.59■□□□□ 0.57
PFDN6-201ENST00000374606 FGFR3P22607 806 aa18.59■□□□□ 0.57
PFDN6-201ENST00000374606 ACAT1P24752 427 aaKnown RBP18.59■□□□□ 0.57
PFDN6-201ENST00000374606 LMO2P25791 158 aa18.59■□□□□ 0.57
PFDN6-201ENST00000374606 PSMC1P62191 440 aaKnown RBP18.59■□□□□ 0.57
PFDN6-201ENST00000374606 ADAM15Q13444 863 aa18.59■□□□□ 0.57
PFDN6-201ENST00000374606 BMS1Q14692 1282 aaKnown RBP18.59■□□□□ 0.57
PFDN6-201ENST00000374606 SGO2Q562F6 1265 aa18.59■□□□□ 0.57
PFDN6-201ENST00000374606 ZNF280DQ6N043 979 aa18.59■□□□□ 0.57
PFDN6-201ENST00000374606 RAD9BQ6WBX8 426 aa18.59■□□□□ 0.57
PFDN6-201ENST00000374606 PBXIP1Q96AQ6 731 aa18.59■□□□□ 0.57
PFDN6-201ENST00000374606 MSLNLQ96KJ4 702 aa18.59■□□□□ 0.57
PFDN6-201ENST00000374606 HEXIM2Q96MH2 286 aaKnown RBP18.59■□□□□ 0.57
PFDN6-201ENST00000374606 SYT11Q9BT88 431 aa18.59■□□□□ 0.57
PFDN6-201ENST00000374606 ALG13Q9NP73 1137 aaKnown RBP18.59■□□□□ 0.57
PFDN6-201ENST00000374606 CDH9Q9ULB4 789 aa18.59■□□□□ 0.57
PFDN6-201ENST00000374606 KIAA1257Q9ULG3 409 aa18.59■□□□□ 0.57
PFDN6-201ENST00000374606 MMEP08473 750 aa18.58■□□□□ 0.56
PFDN6-201ENST00000374606 MTF1Q14872 753 aa18.58■□□□□ 0.56
PFDN6-201ENST00000374606 STILQ15468 1287 aa18.58■□□□□ 0.56
PFDN6-201ENST00000374606 USP41Q3LFD5 358 aa18.58■□□□□ 0.56
PFDN6-201ENST00000374606 VARS2Q5ST30 1063 aaKnown RBP18.58■□□□□ 0.56
PFDN6-201ENST00000374606 GLYCTKQ8IVS8 523 aa18.58■□□□□ 0.56
PFDN6-201ENST00000374606 RNF168Q8IYW5 571 aaPredicted RBP18.58■□□□□ 0.56
PFDN6-201ENST00000374606 CRYBG2Q8N1P7 616 aa18.58■□□□□ 0.56
PFDN6-201ENST00000374606 B3GALNT2Q8NCR0 500 aa18.58■□□□□ 0.56
PFDN6-201ENST00000374606 ZNF606Q8WXB4 792 aa18.58■□□□□ 0.56
PFDN6-201ENST00000374606 TFAP2BQ92481 460 aa18.58■□□□□ 0.56
PFDN6-201ENST00000374606 DDX1Q92499 740 aaKnown RBP18.58■□□□□ 0.56
PFDN6-201ENST00000374606 TTPALQ9BTX7 342 aa18.58■□□□□ 0.56
PFDN6-201ENST00000374606 HERC2P3Q9BVR0 1158 aa18.58■□□□□ 0.56
PFDN6-201ENST00000374606 FAM49BQ9NUQ9 324 aa18.58■□□□□ 0.56
PFDN6-201ENST00000374606 H7C4K7 107 aa18.57■□□□□ 0.56
PFDN6-201ENST00000374606 OAZ2O95190 189 aa18.57■□□□□ 0.56
PFDN6-201ENST00000374606 NDUFA10O95299 355 aa18.57■□□□□ 0.56
PFDN6-201ENST00000374606 EFEMP2O95967 443 aa18.57■□□□□ 0.56
PFDN6-201ENST00000374606 SOD2P04179 222 aa18.57■□□□□ 0.56
PFDN6-201ENST00000374606 CHRNB2P17787 502 aa18.57■□□□□ 0.56
PFDN6-201ENST00000374606 TSPY1Q01534 308 aa18.57■□□□□ 0.56
PFDN6-201ENST00000374606 FMO1Q01740 532 aa18.57■□□□□ 0.56
PFDN6-201ENST00000374606 GFPT1Q06210 699 aaPredicted RBP18.57■□□□□ 0.56
PFDN6-201ENST00000374606 CAMK1Q14012 370 aa18.57■□□□□ 0.56
PFDN6-201ENST00000374606 SLC18A3Q16572 532 aa18.57■□□□□ 0.56
PFDN6-201ENST00000374606 ASTE1Q2TB18 679 aaPredicted RBP18.57■□□□□ 0.56
PFDN6-201ENST00000374606 IER5LQ5T953 404 aa18.57■□□□□ 0.56
PFDN6-201ENST00000374606 TRIM72Q6ZMU5 477 aa18.57■□□□□ 0.56
PFDN6-201ENST00000374606 ANKS3Q6ZW76 656 aa18.57■□□□□ 0.56
PFDN6-201ENST00000374606 OLIG1Q8TAK6 271 aa18.57■□□□□ 0.56
PFDN6-201ENST00000374606 LNX1Q8TBB1 728 aaPredicted RBP18.57■□□□□ 0.56
PFDN6-201ENST00000374606 B3GALT6Q96L58 329 aa18.57■□□□□ 0.56
PFDN6-201ENST00000374606 RTP3Q9BQQ7 232 aa18.57■□□□□ 0.56
PFDN6-201ENST00000374606 ACBD6Q9BR61 282 aa18.57■□□□□ 0.56
PFDN6-201ENST00000374606 VN1R3Q9BXE9 311 aa18.57■□□□□ 0.56
PFDN6-201ENST00000374606 SPTLC3Q9NUV7 552 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms