RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 SNW1Q13573 536 aaKnown RBP18.96■□□□□ 0.63
PTPN11-207ENST00000639857 TEAD2Q15562 447 aa18.96■□□□□ 0.63
PTPN11-207ENST00000639857 ARHGAP15Q53QZ3 475 aa18.96■□□□□ 0.63
PTPN11-207ENST00000639857 IER5LQ5T953 404 aa18.96■□□□□ 0.63
PTPN11-207ENST00000639857 FAM171BQ6P995 826 aa18.96■□□□□ 0.63
PTPN11-207ENST00000639857 POTEHQ6S545 545 aa18.96■□□□□ 0.63
PTPN11-207ENST00000639857 C4orf50Q6ZRC1 276 aa18.96■□□□□ 0.63
PTPN11-207ENST00000639857 OSTM1Q86WC4 334 aa18.96■□□□□ 0.63
PTPN11-207ENST00000639857 FLCNQ8NFG4 579 aa18.96■□□□□ 0.63
PTPN11-207ENST00000639857 ZNF516Q92618 1163 aa18.96■□□□□ 0.63
PTPN11-207ENST00000639857 DNASE1L2Q92874 299 aa18.96■□□□□ 0.63
PTPN11-207ENST00000639857 CEP295NLQ96MC4 621 aa18.96■□□□□ 0.63
PTPN11-207ENST00000639857 GSDMAQ96QA5 445 aa18.96■□□□□ 0.63
PTPN11-207ENST00000639857 GCNAQ96QF7 691 aa18.96■□□□□ 0.63
PTPN11-207ENST00000639857 XYLT2Q9H1B5 865 aa18.96■□□□□ 0.63
PTPN11-207ENST00000639857 TMLHEQ9NVH6 421 aa18.96■□□□□ 0.63
PTPN11-207ENST00000639857 KIF26AQ9ULI4 1882 aaPredicted RBP18.95■□□□□ 0.62
PTPN11-207ENST00000639857 LRRIQ3A6PVS8 624 aaPredicted RBP18.95■□□□□ 0.62
PTPN11-207ENST00000639857 SOBPA7XYQ1 873 aa18.95■□□□□ 0.62
PTPN11-207ENST00000639857 GALR2O43603 387 aaPredicted RBP18.95■□□□□ 0.62
PTPN11-207ENST00000639857 PHACTR2O75167 634 aa18.95■□□□□ 0.62
PTPN11-207ENST00000639857 SOAT2O75908 522 aa18.95■□□□□ 0.62
PTPN11-207ENST00000639857 CST3P01034 146 aaPredicted RBP18.95■□□□□ 0.62
PTPN11-207ENST00000639857 NR2F2P24468 414 aa18.95■□□□□ 0.62
PTPN11-207ENST00000639857 ACAT1P24752 427 aaKnown RBP18.95■□□□□ 0.62
PTPN11-207ENST00000639857 MAGEA11P43364 429 aa18.95■□□□□ 0.62
PTPN11-207ENST00000639857 STARD6P59095 220 aa18.95■□□□□ 0.62
PTPN11-207ENST00000639857 TAF12Q16514 161 aa18.95■□□□□ 0.62
PTPN11-207ENST00000639857 EDRF1Q3B7T1 1238 aa18.95■□□□□ 0.62
PTPN11-207ENST00000639857 WDR72Q3MJ13 1102 aa18.95■□□□□ 0.62
PTPN11-207ENST00000639857 COBLL1Q53SF7 1204 aa18.95■□□□□ 0.62
PTPN11-207ENST00000639857 TDRD10Q5VZ19 366 aaKnown RBP18.95■□□□□ 0.62
PTPN11-207ENST00000639857 TANGO2Q6ICL3 276 aa18.95■□□□□ 0.62
PTPN11-207ENST00000639857 GAREM2Q75VX8 874 aa18.95■□□□□ 0.62
PTPN11-207ENST00000639857 ELOA2Q8IYF1 753 aaPredicted RBP18.95■□□□□ 0.62
PTPN11-207ENST00000639857 PRSS33Q8NF86 280 aa18.95■□□□□ 0.62
PTPN11-207ENST00000639857 ZSCAN18Q8TBC5 510 aaPredicted RBP18.95■□□□□ 0.62
PTPN11-207ENST00000639857 PLEKHO2Q8TD55 490 aa18.95■□□□□ 0.62
PTPN11-207ENST00000639857 MMS19Q96T76 1030 aa18.95■□□□□ 0.62
PTPN11-207ENST00000639857 LPIN3Q9BQK8 851 aa18.95■□□□□ 0.62
PTPN11-207ENST00000639857 SYT15Q9BQS2 421 aa18.95■□□□□ 0.62
PTPN11-207ENST00000639857 SLITRK6Q9H5Y7 841 aa18.95■□□□□ 0.62
PTPN11-207ENST00000639857 ZNF334Q9HCZ1 680 aaPredicted RBP18.95■□□□□ 0.62
PTPN11-207ENST00000639857 TRPV5Q9NQA5 729 aa18.95■□□□□ 0.62
PTPN11-207ENST00000639857 CA14Q9ULX7 337 aa18.95■□□□□ 0.62
PTPN11-207ENST00000639857 TICRRQ7Z2Z1 1910 aa18.95■□□□□ 0.62
PTPN11-207ENST00000639857 NRG2O14511 850 aaPredicted RBP18.94■□□□□ 0.62
PTPN11-207ENST00000639857 SMC2O95347 1197 aa18.94■□□□□ 0.62
PTPN11-207ENST00000639857 C4BPAP04003 597 aaKnown RBP18.94■□□□□ 0.62
PTPN11-207ENST00000639857 CSH1P0DML2 217 aa18.94■□□□□ 0.62
PTPN11-207ENST00000639857 CSH2P0DML3 217 aa18.94■□□□□ 0.62
PTPN11-207ENST00000639857 RFX1P22670 979 aa18.94■□□□□ 0.62
PTPN11-207ENST00000639857 GABRR2P28476 465 aa18.94■□□□□ 0.62
PTPN11-207ENST00000639857 CASP4P49662 377 aa18.94■□□□□ 0.62
PTPN11-207ENST00000639857 BIRC3Q13489 604 aa18.94■□□□□ 0.62
PTPN11-207ENST00000639857 ZACNQ401N2 412 aa18.94■□□□□ 0.62
PTPN11-207ENST00000639857 ZCWPW2Q504Y3 356 aa18.94■□□□□ 0.62
PTPN11-207ENST00000639857 CEP135Q66GS9 1140 aa18.94■□□□□ 0.62
PTPN11-207ENST00000639857 INTS8Q75QN2 995 aaKnown RBP18.94■□□□□ 0.62
PTPN11-207ENST00000639857 SPATA2LQ8IUW3 424 aaPredicted RBP18.94■□□□□ 0.62
PTPN11-207ENST00000639857 SPATA20Q8TB22 786 aa18.94■□□□□ 0.62
PTPN11-207ENST00000639857 ZSWIM3Q96MP5 696 aa18.94■□□□□ 0.62
PTPN11-207ENST00000639857 PI4K2AQ9BTU6 479 aa18.94■□□□□ 0.62
PTPN11-207ENST00000639857 ATXN3LQ9H3M9 355 aa18.94■□□□□ 0.62
PTPN11-207ENST00000639857 TBC1D17Q9HA65 648 aa18.94■□□□□ 0.62
PTPN11-207ENST00000639857 IL21Q9HBE4 155 aa18.94■□□□□ 0.62
PTPN11-207ENST00000639857 OBP2AQ9NY56 170 aa18.94■□□□□ 0.62
PTPN11-207ENST00000639857 UXTQ9UBK9 157 aaPredicted RBP18.94■□□□□ 0.62
PTPN11-207ENST00000639857 GTF3C4Q9UKN8 822 aa18.94■□□□□ 0.62
PTPN11-207ENST00000639857 ANAPC1Q9H1A4 1944 aa18.94■□□□□ 0.62
PTPN11-207ENST00000639857 GJA1P17302 382 aa18.93■□□□□ 0.62
PTPN11-207ENST00000639857 PSMC3P17980 439 aa18.93■□□□□ 0.62
PTPN11-207ENST00000639857 DDX6P26196 483 aaKnown RBP eCLIP18.93■□□□□ 0.62
PTPN11-207ENST00000639857 MYL6P60660 151 aa18.93■□□□□ 0.62
PTPN11-207ENST00000639857 NHLH1Q02575 133 aa18.93■□□□□ 0.62
PTPN11-207ENST00000639857 PNOCQ13519 176 aa18.93■□□□□ 0.62
PTPN11-207ENST00000639857 NCOA4Q13772 614 aa18.93■□□□□ 0.62
PTPN11-207ENST00000639857 MLF2Q15773 248 aaPredicted RBP18.93■□□□□ 0.62
PTPN11-207ENST00000639857 ZNF699Q32M78 642 aa18.93■□□□□ 0.62
PTPN11-207ENST00000639857 VSTM1Q6UX27 236 aa18.93■□□□□ 0.62
PTPN11-207ENST00000639857 ST13P5Q8NFI4 369 aaPredicted RBP18.93■□□□□ 0.62
PTPN11-207ENST00000639857 TAF4BQ92750 862 aa18.93■□□□□ 0.62
PTPN11-207ENST00000639857 IRF7Q92985 503 aa18.93■□□□□ 0.62
PTPN11-207ENST00000639857 TRMT2BQ96GJ1 504 aaKnown RBP18.93■□□□□ 0.62
PTPN11-207ENST00000639857 MYRFLQ96LU7 910 aa18.93■□□□□ 0.62
PTPN11-207ENST00000639857 MKNK1Q9BUB5 465 aa18.93■□□□□ 0.62
PTPN11-207ENST00000639857 DDX23Q9BUQ8 820 aaKnown RBP18.93■□□□□ 0.62
PTPN11-207ENST00000639857 TRMT61BQ9BVS5 477 aaKnown RBP18.93■□□□□ 0.62
PTPN11-207ENST00000639857 PLA2G2FQ9BZM2 168 aa18.93■□□□□ 0.62
PTPN11-207ENST00000639857 SNX25Q9H3E2 840 aa18.93■□□□□ 0.62
PTPN11-207ENST00000639857 TASP1Q9H6P5 420 aa18.93■□□□□ 0.62
PTPN11-207ENST00000639857 CACNA1HO95180 2353 aa18.92■□□□□ 0.62
PTPN11-207ENST00000639857 MYBPHLA2RUH7 354 aa18.92■□□□□ 0.62
PTPN11-207ENST00000639857 NOL4O94818 638 aa18.92■□□□□ 0.62
PTPN11-207ENST00000639857 P4HA1P13674 534 aa18.92■□□□□ 0.62
PTPN11-207ENST00000639857 HMGA1P17096 107 aaKnown RBP18.92■□□□□ 0.62
PTPN11-207ENST00000639857 PSMC2P35998 433 aaKnown RBP18.92■□□□□ 0.62
PTPN11-207ENST00000639857 GNL1P36915 607 aaPredicted RBP18.92■□□□□ 0.62
PTPN11-207ENST00000639857 MCCD1P59942 119 aaPredicted RBP18.92■□□□□ 0.62
PTPN11-207ENST00000639857 TCF15Q12870 199 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 146.5 ms