RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 PSMC1P62191 440 aaKnown RBP24.19■■□□□ 1.46
CCDC9-204ENST00000599398 DLG4P78352 724 aa24.19■■□□□ 1.46
CCDC9-204ENST00000599398 CWF19L1Q69YN2 538 aaKnown RBP24.19■■□□□ 1.46
CCDC9-204ENST00000599398 LIMS2Q7Z4I7 341 aa24.19■■□□□ 1.46
CCDC9-204ENST00000599398 TMEM105Q8N8V8 129 aa24.19■■□□□ 1.46
CCDC9-204ENST00000599398 ZSCAN18Q8TBC5 510 aaPredicted RBP24.19■■□□□ 1.46
CCDC9-204ENST00000599398 SMARCD2Q92925 531 aa24.19■■□□□ 1.46
CCDC9-204ENST00000599398 PRRX2Q99811 253 aa24.19■■□□□ 1.46
CCDC9-204ENST00000599398 MRPL45Q9BRJ2 306 aaKnown RBP24.19■■□□□ 1.46
CCDC9-204ENST00000599398 GPR88Q9GZN0 384 aa24.19■■□□□ 1.46
CCDC9-204ENST00000599398 SNX25Q9H3E2 840 aa24.19■■□□□ 1.46
CCDC9-204ENST00000599398 HOOK1Q9UJC3 728 aaKnown RBP24.19■■□□□ 1.46
CCDC9-204ENST00000599398 CDH9Q9ULB4 789 aa24.19■■□□□ 1.46
CCDC9-204ENST00000599398 CIZ1Q9ULV3 898 aaPredicted RBP24.19■■□□□ 1.46
CCDC9-204ENST00000599398 MYBPHLA2RUH7 354 aa24.18■■□□□ 1.46
CCDC9-204ENST00000599398 ATP2C2O75185 946 aa24.18■■□□□ 1.46
CCDC9-204ENST00000599398 SMC2O95347 1197 aa24.18■■□□□ 1.46
CCDC9-204ENST00000599398 FCARP24071 287 aa24.18■■□□□ 1.46
CCDC9-204ENST00000599398 CYP2F1P24903 491 aa24.18■■□□□ 1.46
CCDC9-204ENST00000599398 RPL13P26373 211 aaKnown RBP24.18■■□□□ 1.46
CCDC9-204ENST00000599398 ATICP31939 592 aa24.18■■□□□ 1.46
CCDC9-204ENST00000599398 GPR15P49685 360 aa24.18■■□□□ 1.46
CCDC9-204ENST00000599398 CLDN10P78369 228 aa24.18■■□□□ 1.46
CCDC9-204ENST00000599398 ARHGAP15Q53QZ3 475 aa24.18■■□□□ 1.46
CCDC9-204ENST00000599398 GAREM2Q75VX8 874 aa24.18■■□□□ 1.46
CCDC9-204ENST00000599398 OR6B3Q8NGW1 331 aa24.18■■□□□ 1.46
CCDC9-204ENST00000599398 TMC2Q8TDI7 906 aa24.18■■□□□ 1.46
CCDC9-204ENST00000599398 ERCC4Q92889 916 aaPredicted RBP24.18■■□□□ 1.46
CCDC9-204ENST00000599398 GCNAQ96QF7 691 aa24.18■■□□□ 1.46
CCDC9-204ENST00000599398 PKMYT1Q99640 499 aa24.18■■□□□ 1.46
CCDC9-204ENST00000599398 ABCB6Q9NP58 842 aa24.18■■□□□ 1.46
CCDC9-204ENST00000599398 C4BPAP04003 597 aaKnown RBP24.17■■□□□ 1.46
CCDC9-204ENST00000599398 GNL1P36915 607 aaPredicted RBP24.17■■□□□ 1.46
CCDC9-204ENST00000599398 RPL10AP62906 217 aaKnown RBP24.17■■□□□ 1.46
CCDC9-204ENST00000599398 PFKPQ01813 784 aa24.17■■□□□ 1.46
CCDC9-204ENST00000599398 NCOA4Q13772 614 aa24.17■■□□□ 1.46
CCDC9-204ENST00000599398 GRM2Q14416 872 aa24.17■■□□□ 1.46
CCDC9-204ENST00000599398 ZNF699Q32M78 642 aa24.17■■□□□ 1.46
CCDC9-204ENST00000599398 STXBP5Q5T5C0 1151 aa24.17■■□□□ 1.46
CCDC9-204ENST00000599398 SDHAF4Q5VUM1 108 aa24.17■■□□□ 1.46
CCDC9-204ENST00000599398 C4orf50Q6ZRC1 276 aa24.17■■□□□ 1.46
CCDC9-204ENST00000599398 PRSS33Q8NF86 280 aa24.17■■□□□ 1.46
CCDC9-204ENST00000599398 SMARCE1Q969G3 411 aa24.17■■□□□ 1.46
CCDC9-204ENST00000599398 TIGD1Q96MW7 591 aa24.17■■□□□ 1.46
CCDC9-204ENST00000599398 GSDMAQ96QA5 445 aa24.17■■□□□ 1.46
CCDC9-204ENST00000599398 XYLT2Q9H1B5 865 aa24.17■■□□□ 1.46
CCDC9-204ENST00000599398 TBC1D17Q9HA65 648 aa24.17■■□□□ 1.46
CCDC9-204ENST00000599398 MAGED2Q9UNF1 606 aaPredicted RBP24.17■■□□□ 1.46
CCDC9-204ENST00000599398 TACC1O75410 805 aa24.16■■□□□ 1.46
CCDC9-204ENST00000599398 AKAP3O75969 853 aa24.16■■□□□ 1.46
CCDC9-204ENST00000599398 STAU1O95793 577 aaKnown RBP24.16■■□□□ 1.46
CCDC9-204ENST00000599398 AOC1P19801 751 aa24.16■■□□□ 1.46
CCDC9-204ENST00000599398 CDC25CP30307 473 aa24.16■■□□□ 1.46
CCDC9-204ENST00000599398 VIPR2P41587 438 aa24.16■■□□□ 1.46
CCDC9-204ENST00000599398 VAMP7P51809 220 aa24.16■■□□□ 1.46
CCDC9-204ENST00000599398 ADAM9Q13443 819 aa24.16■■□□□ 1.46
CCDC9-204ENST00000599398 NFIL3Q16649 462 aa24.16■■□□□ 1.46
CCDC9-204ENST00000599398 DDR2Q16832 855 aa24.16■■□□□ 1.46
CCDC9-204ENST00000599398 GPR158Q5T848 1215 aa24.16■■□□□ 1.46
CCDC9-204ENST00000599398 FAM171BQ6P995 826 aa24.16■■□□□ 1.46
CCDC9-204ENST00000599398 SCN4BQ8IWT1 228 aa24.16■■□□□ 1.46
CCDC9-204ENST00000599398 FAM186BQ8IYM0 893 aa24.16■■□□□ 1.46
CCDC9-204ENST00000599398 STKLD1Q8NE28 680 aa24.16■■□□□ 1.46
CCDC9-204ENST00000599398 MYLPFQ96A32 169 aa24.16■■□□□ 1.46
CCDC9-204ENST00000599398 CRTAC1Q9NQ79 661 aa24.16■■□□□ 1.46
CCDC9-204ENST00000599398 MAGEC2Q9UBF1 373 aaPredicted RBP24.16■■□□□ 1.46
CCDC9-204ENST00000599398 PCDHA5Q9Y5H7 936 aa24.16■■□□□ 1.46
CCDC9-204ENST00000599398 MAPK13O15264 365 aa24.15■■□□□ 1.46
CCDC9-204ENST00000599398 PI15O43692 258 aa24.15■■□□□ 1.46
CCDC9-204ENST00000599398 KINO60870 393 aaKnown RBP24.15■■□□□ 1.46
CCDC9-204ENST00000599398 CSH1P0DML2 217 aa24.15■■□□□ 1.46
CCDC9-204ENST00000599398 CSH2P0DML3 217 aa24.15■■□□□ 1.46
CCDC9-204ENST00000599398 KRT13P13646 458 aa24.15■■□□□ 1.46
CCDC9-204ENST00000599398 PSMC2P35998 433 aaKnown RBP24.15■■□□□ 1.46
CCDC9-204ENST00000599398 CYP4F8P98187 520 aa24.15■■□□□ 1.46
CCDC9-204ENST00000599398 CYP27A1Q02318 531 aa24.15■■□□□ 1.46
CCDC9-204ENST00000599398 MAPRE1Q15691 268 aaKnown RBP24.15■■□□□ 1.46
CCDC9-204ENST00000599398 CFAP221Q4G0U5 840 aa24.15■■□□□ 1.46
CCDC9-204ENST00000599398 ZNF667Q5HYK9 610 aa24.15■■□□□ 1.46
CCDC9-204ENST00000599398 ZNF658Q5TYW1 1059 aaPredicted RBP24.15■■□□□ 1.46
CCDC9-204ENST00000599398 INTS8Q75QN2 995 aaKnown RBP24.15■■□□□ 1.46
CCDC9-204ENST00000599398 GPIHBP1Q8IV16 184 aa24.15■■□□□ 1.46
CCDC9-204ENST00000599398 ELMO3Q96BJ8 720 aa24.15■■□□□ 1.46
CCDC9-204ENST00000599398 FUBP3Q96I24 572 aaKnown RBP eCLIP24.15■■□□□ 1.46
CCDC9-204ENST00000599398 SHDQ96IW2 340 aa24.15■■□□□ 1.46
CCDC9-204ENST00000599398 TRMT61BQ9BVS5 477 aaKnown RBP24.15■■□□□ 1.46
CCDC9-204ENST00000599398 BRD9Q9H8M2 597 aa24.15■■□□□ 1.46
CCDC9-204ENST00000599398 IKBKBO14920 756 aa24.14■■□□□ 1.45
CCDC9-204ENST00000599398 VNN1O95497 513 aa24.14■■□□□ 1.45
CCDC9-204ENST00000599398 FAM163BP0C2L3 166 aa24.14■■□□□ 1.45
CCDC9-204ENST00000599398 PRCPP42785 496 aa24.14■■□□□ 1.45
CCDC9-204ENST00000599398 PTPN5P54829 565 aa24.14■■□□□ 1.45
CCDC9-204ENST00000599398 ZACNQ401N2 412 aa24.14■■□□□ 1.45
CCDC9-204ENST00000599398 ZCWPW2Q504Y3 356 aa24.14■■□□□ 1.45
CCDC9-204ENST00000599398 SLC44A4Q53GD3 710 aa24.14■■□□□ 1.45
CCDC9-204ENST00000599398 VITQ6UXI7 678 aa24.14■■□□□ 1.45
CCDC9-204ENST00000599398 SCARA5Q6ZMJ2 495 aa24.14■■□□□ 1.45
CCDC9-204ENST00000599398 SV2AQ7L0J3 742 aa24.14■■□□□ 1.45
CCDC9-204ENST00000599398 SMYD3Q9H7B4 428 aa24.14■■□□□ 1.45
CCDC9-204ENST00000599398 TRPV4Q9HBA0 871 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms