RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-226ENST00000590171 PJA1Q8NG27 643 aa22.08■■□□□ 1.13
CIRBP-226ENST00000590171 RSPRY1Q96DX4 576 aa22.08■■□□□ 1.13
CIRBP-226ENST00000590171 TRMT61BQ9BVS5 477 aaKnown RBP22.08■■□□□ 1.13
CIRBP-226ENST00000590171 DLGAP2Q9P1A6 1054 aa22.08■■□□□ 1.13
CIRBP-226ENST00000590171 SIT1Q9Y3P8 196 aa22.08■■□□□ 1.13
CIRBP-226ENST00000590171 KANSL1LA0AUZ9 987 aa22.07■■□□□ 1.12
CIRBP-226ENST00000590171 LRRN2O75325 713 aa22.07■■□□□ 1.12
CIRBP-226ENST00000590171 PSMC3P17980 439 aa22.07■■□□□ 1.12
CIRBP-226ENST00000590171 PCSK1P29120 753 aa22.07■■□□□ 1.12
CIRBP-226ENST00000590171 CASP4P49662 377 aa22.07■■□□□ 1.12
CIRBP-226ENST00000590171 CYP4F8P98187 520 aa22.07■■□□□ 1.12
CIRBP-226ENST00000590171 DPYDQ12882 1025 aa22.07■■□□□ 1.12
CIRBP-226ENST00000590171 DEPDC1BQ8WUY9 529 aa22.07■■□□□ 1.12
CIRBP-226ENST00000590171 DNASE1L2Q92874 299 aa22.07■■□□□ 1.12
CIRBP-226ENST00000590171 BRD9Q9H8M2 597 aa22.07■■□□□ 1.12
CIRBP-226ENST00000590171 HEBP1Q9NRV9 189 aa22.07■■□□□ 1.12
CIRBP-226ENST00000590171 DMAC2Q9NW81 257 aa22.07■■□□□ 1.12
CIRBP-226ENST00000590171 MYBPHLA2RUH7 354 aa22.06■■□□□ 1.12
CIRBP-226ENST00000590171 HEPACAM2A8MVW5 462 aa22.06■■□□□ 1.12
CIRBP-226ENST00000590171 PDXKO00764 312 aa22.06■■□□□ 1.12
CIRBP-226ENST00000590171 RHOBTB3O94955 611 aa22.06■■□□□ 1.12
CIRBP-226ENST00000590171 GLULP15104 373 aa22.06■■□□□ 1.12
CIRBP-226ENST00000590171 HMGA1P17096 107 aaKnown RBP22.06■■□□□ 1.12
CIRBP-226ENST00000590171 CD72P21854 359 aa22.06■■□□□ 1.12
CIRBP-226ENST00000590171 CYP2F1P24903 491 aa22.06■■□□□ 1.12
CIRBP-226ENST00000590171 LMO2P25791 158 aa22.06■■□□□ 1.12
CIRBP-226ENST00000590171 TAF12Q16514 161 aa22.06■■□□□ 1.12
CIRBP-226ENST00000590171 GPR158Q5T848 1215 aa22.06■■□□□ 1.12
CIRBP-226ENST00000590171 SDHAF4Q5VUM1 108 aa22.06■■□□□ 1.12
CIRBP-226ENST00000590171 TPRG1Q6ZUI0 275 aa22.06■■□□□ 1.12
CIRBP-226ENST00000590171 SLC9A9Q8IVB4 645 aa22.06■■□□□ 1.12
CIRBP-226ENST00000590171 STKLD1Q8NE28 680 aa22.06■■□□□ 1.12
CIRBP-226ENST00000590171 TMEM174Q8WUU8 243 aa22.06■■□□□ 1.12
CIRBP-226ENST00000590171 MMS19Q96T76 1030 aa22.06■■□□□ 1.12
CIRBP-226ENST00000590171 SYT15Q9BQS2 421 aa22.06■■□□□ 1.12
CIRBP-226ENST00000590171 ABCB6Q9NP58 842 aa22.06■■□□□ 1.12
CIRBP-226ENST00000590171 LRRIQ3A6PVS8 624 aaPredicted RBP22.05■■□□□ 1.12
CIRBP-226ENST00000590171 ATP2C2O75185 946 aa22.05■■□□□ 1.12
CIRBP-226ENST00000590171 ZNF202O95125 648 aa22.05■■□□□ 1.12
CIRBP-226ENST00000590171 WARSP23381 471 aaKnown RBP22.05■■□□□ 1.12
CIRBP-226ENST00000590171 CDC25CP30307 473 aa22.05■■□□□ 1.12
CIRBP-226ENST00000590171 GDI1P31150 447 aa22.05■■□□□ 1.12
CIRBP-226ENST00000590171 PSMC1P62191 440 aaKnown RBP22.05■■□□□ 1.12
CIRBP-226ENST00000590171 ANGPT1Q15389 498 aa22.05■■□□□ 1.12
CIRBP-226ENST00000590171 DDR2Q16832 855 aa22.05■■□□□ 1.12
CIRBP-226ENST00000590171 ARHGAP15Q53QZ3 475 aa22.05■■□□□ 1.12
CIRBP-226ENST00000590171 FAM171BQ6P995 826 aa22.05■■□□□ 1.12
CIRBP-226ENST00000590171 GPIHBP1Q8IV16 184 aa22.05■■□□□ 1.12
CIRBP-226ENST00000590171 ARID3BQ8IVW6 561 aaPredicted RBP22.05■■□□□ 1.12
CIRBP-226ENST00000590171 MFSD6LQ8IWD5 586 aa22.05■■□□□ 1.12
CIRBP-226ENST00000590171 PARD3BQ8TEW8 1205 aa22.05■■□□□ 1.12
CIRBP-226ENST00000590171 LTB4R2Q9NPC1 389 aa22.05■■□□□ 1.12
CIRBP-226ENST00000590171 MTF2Q9Y483 593 aaPredicted RBP22.05■■□□□ 1.12
CIRBP-226ENST00000590171 SHISA7A6NL88 538 aa22.04■■□□□ 1.12
CIRBP-226ENST00000590171 STAU1O95793 577 aaKnown RBP22.04■■□□□ 1.12
CIRBP-226ENST00000590171 NR3C1P04150 777 aa22.04■■□□□ 1.12
CIRBP-226ENST00000590171 MYL6P60660 151 aa22.04■■□□□ 1.12
CIRBP-226ENST00000590171 UBXN2BQ14CS0 331 aa22.04■■□□□ 1.12
CIRBP-226ENST00000590171 CFAP221Q4G0U5 840 aa22.04■■□□□ 1.12
CIRBP-226ENST00000590171 TDRD10Q5VZ19 366 aaKnown RBP22.04■■□□□ 1.12
CIRBP-226ENST00000590171 TMEM150AQ86TG1 271 aa22.04■■□□□ 1.12
CIRBP-226ENST00000590171 SPATA2LQ8IUW3 424 aaPredicted RBP22.04■■□□□ 1.12
CIRBP-226ENST00000590171 IRF7Q92985 503 aa22.04■■□□□ 1.12
CIRBP-226ENST00000590171 CCDC47Q96A33 483 aaKnown RBP22.04■■□□□ 1.12
CIRBP-226ENST00000590171 E2F7Q96AV8 911 aa22.04■■□□□ 1.12
CIRBP-226ENST00000590171 GCNAQ96QF7 691 aa22.04■■□□□ 1.12
CIRBP-226ENST00000590171 MRPL45Q9BRJ2 306 aaKnown RBP22.04■■□□□ 1.12
CIRBP-226ENST00000590171 XYLT2Q9H1B5 865 aa22.04■■□□□ 1.12
CIRBP-226ENST00000590171 TASP1Q9H6P5 420 aa22.04■■□□□ 1.12
CIRBP-226ENST00000590171 CRTAC1Q9NQ79 661 aa22.04■■□□□ 1.12
CIRBP-226ENST00000590171 CDH9Q9ULB4 789 aa22.04■■□□□ 1.12
CIRBP-226ENST00000590171 NME7Q9Y5B8 376 aa22.04■■□□□ 1.12
CIRBP-226ENST00000590171 COL4A2P08572 1712 aa22.03■■□□□ 1.12
CIRBP-226ENST00000590171 ZNF263O14978 683 aa22.03■■□□□ 1.12
CIRBP-226ENST00000590171 PRAMEF12O95522 483 aa22.03■■□□□ 1.12
CIRBP-226ENST00000590171 F11P03951 625 aa22.03■■□□□ 1.12
CIRBP-226ENST00000590171 PDGFRBP09619 1106 aa22.03■■□□□ 1.12
CIRBP-226ENST00000590171 CSH1P0DML2 217 aa22.03■■□□□ 1.12
CIRBP-226ENST00000590171 CSH2P0DML3 217 aa22.03■■□□□ 1.12
CIRBP-226ENST00000590171 RPL10AP62906 217 aaKnown RBP22.03■■□□□ 1.12
CIRBP-226ENST00000590171 CLDN10P78369 228 aa22.03■■□□□ 1.12
CIRBP-226ENST00000590171 NUCB2P80303 420 aa22.03■■□□□ 1.12
CIRBP-226ENST00000590171 TRPC3Q13507 836 aa22.03■■□□□ 1.12
CIRBP-226ENST00000590171 WDR72Q3MJ13 1102 aa22.03■■□□□ 1.12
CIRBP-226ENST00000590171 MYLPFQ96A32 169 aa22.03■■□□□ 1.12
CIRBP-226ENST00000590171 FUBP3Q96I24 572 aaKnown RBP eCLIP22.03■■□□□ 1.12
CIRBP-226ENST00000590171 LRRC3BQ96PB8 259 aa22.03■■□□□ 1.12
CIRBP-226ENST00000590171 TRPV5Q9NQA5 729 aa22.03■■□□□ 1.12
CIRBP-226ENST00000590171 MAGED2Q9UNF1 606 aaPredicted RBP22.03■■□□□ 1.12
CIRBP-226ENST00000590171 MAPK8IP1Q9UQF2 711 aa22.03■■□□□ 1.12
CIRBP-226ENST00000590171 TRAF3IP3Q9Y228 551 aa22.03■■□□□ 1.12
CIRBP-226ENST00000590171 FAM170BA6NMN3 283 aa22.02■■□□□ 1.12
CIRBP-226ENST00000590171 ARNTLO00327 626 aa22.02■■□□□ 1.12
CIRBP-226ENST00000590171 PHACTR2O75167 634 aa22.02■■□□□ 1.12
CIRBP-226ENST00000590171 TACC1O75410 805 aa22.02■■□□□ 1.12
CIRBP-226ENST00000590171 TARSP26639 723 aaKnown RBP22.02■■□□□ 1.12
CIRBP-226ENST00000590171 ATICP31939 592 aa22.02■■□□□ 1.12
CIRBP-226ENST00000590171 NLRP12P59046 1061 aa22.02■■□□□ 1.12
CIRBP-226ENST00000590171 TNNC1P63316 161 aa22.02■■□□□ 1.12
CIRBP-226ENST00000590171 DLG4P78352 724 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms