RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 CDC25CP30307 473 aa24.9■■□□□ 1.58
CHFR-222ENST00000544093 GPC5P78333 572 aa24.9■■□□□ 1.58
CHFR-222ENST00000544093 TEAD2Q15562 447 aa24.9■■□□□ 1.58
CHFR-222ENST00000544093 PHLDB3Q6NSJ2 640 aa24.9■■□□□ 1.58
CHFR-222ENST00000544093 INTS8Q75QN2 995 aaKnown RBP24.9■■□□□ 1.58
CHFR-222ENST00000544093 OSTM1Q86WC4 334 aa24.9■■□□□ 1.58
CHFR-222ENST00000544093 SPATA2LQ8IUW3 424 aaPredicted RBP24.9■■□□□ 1.58
CHFR-222ENST00000544093 FLCNQ8NFG4 579 aa24.9■■□□□ 1.58
CHFR-222ENST00000544093 SYT15Q9BQS2 421 aa24.9■■□□□ 1.58
CHFR-222ENST00000544093 IRF2BPLQ9H1B7 796 aa24.9■■□□□ 1.58
CHFR-222ENST00000544093 SNX25Q9H3E2 840 aa24.9■■□□□ 1.58
CHFR-222ENST00000544093 TMLHEQ9NVH6 421 aa24.9■■□□□ 1.58
CHFR-222ENST00000544093 GTF3C4Q9UKN8 822 aa24.9■■□□□ 1.58
CHFR-222ENST00000544093 MAPK8IP1Q9UQF2 711 aa24.9■■□□□ 1.58
CHFR-222ENST00000544093 CASP4P49662 377 aa24.89■■□□□ 1.58
CHFR-222ENST00000544093 PTPN5P54829 565 aa24.89■■□□□ 1.58
CHFR-222ENST00000544093 PNOCQ13519 176 aa24.89■■□□□ 1.58
CHFR-222ENST00000544093 EDRF1Q3B7T1 1238 aa24.89■■□□□ 1.58
CHFR-222ENST00000544093 TDRD10Q5VZ19 366 aaKnown RBP24.89■■□□□ 1.58
CHFR-222ENST00000544093 FAM171BQ6P995 826 aa24.89■■□□□ 1.58
CHFR-222ENST00000544093 ZSCAN18Q8TBC5 510 aaPredicted RBP24.89■■□□□ 1.58
CHFR-222ENST00000544093 DEPDC1BQ8WUY9 529 aa24.89■■□□□ 1.58
CHFR-222ENST00000544093 CEP295NLQ96MC4 621 aa24.89■■□□□ 1.58
CHFR-222ENST00000544093 LPIN3Q9BQK8 851 aa24.89■■□□□ 1.58
CHFR-222ENST00000544093 CA14Q9ULX7 337 aa24.89■■□□□ 1.58
CHFR-222ENST00000544093 KRBA1A5PL33 1030 aa24.88■■□□□ 1.57
CHFR-222ENST00000544093 CSH1P0DML2 217 aa24.88■■□□□ 1.57
CHFR-222ENST00000544093 CSH2P0DML3 217 aa24.88■■□□□ 1.57
CHFR-222ENST00000544093 P4HA1P13674 534 aa24.88■■□□□ 1.57
CHFR-222ENST00000544093 NPR3P17342 541 aa24.88■■□□□ 1.57
CHFR-222ENST00000544093 FCARP24071 287 aa24.88■■□□□ 1.57
CHFR-222ENST00000544093 GABRR2P28476 465 aa24.88■■□□□ 1.57
CHFR-222ENST00000544093 GNL1P36915 607 aaPredicted RBP24.88■■□□□ 1.57
CHFR-222ENST00000544093 MAGEA11P43364 429 aa24.88■■□□□ 1.57
CHFR-222ENST00000544093 MYL6P60660 151 aa24.88■■□□□ 1.57
CHFR-222ENST00000544093 PRKCQQ04759 706 aa24.88■■□□□ 1.57
CHFR-222ENST00000544093 NCOA4Q13772 614 aa24.88■■□□□ 1.57
CHFR-222ENST00000544093 COBLL1Q53SF7 1204 aa24.88■■□□□ 1.57
CHFR-222ENST00000544093 ZNF658Q5TYW1 1059 aaPredicted RBP24.88■■□□□ 1.57
CHFR-222ENST00000544093 CWF19L1Q69YN2 538 aaKnown RBP24.88■■□□□ 1.57
CHFR-222ENST00000544093 TANGO2Q6ICL3 276 aa24.88■■□□□ 1.57
CHFR-222ENST00000544093 ST13P5Q8NFI4 369 aaPredicted RBP24.88■■□□□ 1.57
CHFR-222ENST00000544093 PLEKHO2Q8TD55 490 aa24.88■■□□□ 1.57
CHFR-222ENST00000544093 TAF4BQ92750 862 aa24.88■■□□□ 1.57
CHFR-222ENST00000544093 SMARCE1Q969G3 411 aa24.88■■□□□ 1.57
CHFR-222ENST00000544093 PI4K2AQ9BTU6 479 aa24.88■■□□□ 1.57
CHFR-222ENST00000544093 XYLT2Q9H1B5 865 aa24.88■■□□□ 1.57
CHFR-222ENST00000544093 ATXN3LQ9H3M9 355 aa24.88■■□□□ 1.57
CHFR-222ENST00000544093 SOBPA7XYQ1 873 aa24.87■■□□□ 1.57
CHFR-222ENST00000544093 STK25O00506 426 aa24.87■■□□□ 1.57
CHFR-222ENST00000544093 C4BPAP04003 597 aaKnown RBP24.87■■□□□ 1.57
CHFR-222ENST00000544093 KRT13P13646 458 aa24.87■■□□□ 1.57
CHFR-222ENST00000544093 GJA1P17302 382 aa24.87■■□□□ 1.57
CHFR-222ENST00000544093 WEE1P30291 646 aa24.87■■□□□ 1.57
CHFR-222ENST00000544093 PSMC2P35998 433 aaKnown RBP24.87■■□□□ 1.57
CHFR-222ENST00000544093 ADAM9Q13443 819 aa24.87■■□□□ 1.57
CHFR-222ENST00000544093 ZNF699Q32M78 642 aa24.87■■□□□ 1.57
CHFR-222ENST00000544093 ZACNQ401N2 412 aa24.87■■□□□ 1.57
CHFR-222ENST00000544093 ZNF667Q5HYK9 610 aa24.87■■□□□ 1.57
CHFR-222ENST00000544093 IER5LQ5T953 404 aa24.87■■□□□ 1.57
CHFR-222ENST00000544093 VSTM1Q6UX27 236 aa24.87■■□□□ 1.57
CHFR-222ENST00000544093 GAREM2Q75VX8 874 aa24.87■■□□□ 1.57
CHFR-222ENST00000544093 TMEM105Q8N8V8 129 aa24.87■■□□□ 1.57
CHFR-222ENST00000544093 SPATA20Q8TB22 786 aa24.87■■□□□ 1.57
CHFR-222ENST00000544093 DNASE1L2Q92874 299 aa24.87■■□□□ 1.57
CHFR-222ENST00000544093 ZSWIM3Q96MP5 696 aa24.87■■□□□ 1.57
CHFR-222ENST00000544093 TRMT61BQ9BVS5 477 aaKnown RBP24.87■■□□□ 1.57
CHFR-222ENST00000544093 ZNF334Q9HCZ1 680 aaPredicted RBP24.87■■□□□ 1.57
CHFR-222ENST00000544093 UXTQ9UBK9 157 aaPredicted RBP24.87■■□□□ 1.57
CHFR-222ENST00000544093 NUP210Q8TEM1 1887 aaPredicted RBP24.87■■□□□ 1.57
CHFR-222ENST00000544093 KINO60870 393 aaKnown RBP24.86■■□□□ 1.57
CHFR-222ENST00000544093 PSMC3P17980 439 aa24.86■■□□□ 1.57
CHFR-222ENST00000544093 LMO2P25791 158 aa24.86■■□□□ 1.57
CHFR-222ENST00000544093 VAMP7P51809 220 aa24.86■■□□□ 1.57
CHFR-222ENST00000544093 SGSM1Q2NKQ1 1148 aa24.86■■□□□ 1.57
CHFR-222ENST00000544093 ZCWPW2Q504Y3 356 aa24.86■■□□□ 1.57
CHFR-222ENST00000544093 POTEHQ6S545 545 aa24.86■■□□□ 1.57
CHFR-222ENST00000544093 FAM186BQ8IYM0 893 aa24.86■■□□□ 1.57
CHFR-222ENST00000544093 OR6B3Q8NGW1 331 aa24.86■■□□□ 1.57
CHFR-222ENST00000544093 GIPC2Q8TF65 315 aa24.86■■□□□ 1.57
CHFR-222ENST00000544093 MKNK1Q9BUB5 465 aa24.86■■□□□ 1.57
CHFR-222ENST00000544093 TBC1D17Q9HA65 648 aa24.86■■□□□ 1.57
CHFR-222ENST00000544093 MAGEC2Q9UBF1 373 aaPredicted RBP24.86■■□□□ 1.57
CHFR-222ENST00000544093 NXF1Q9UBU9 619 aaKnown RBP24.86■■□□□ 1.57
CHFR-222ENST00000544093 MYBPHLA2RUH7 354 aa24.85■■□□□ 1.57
CHFR-222ENST00000544093 GALR2O43603 387 aaPredicted RBP24.85■■□□□ 1.57
CHFR-222ENST00000544093 AKAP3O75969 853 aa24.85■■□□□ 1.57
CHFR-222ENST00000544093 CLSTN1O94985 981 aa24.85■■□□□ 1.57
CHFR-222ENST00000544093 CYP2F1P24903 491 aa24.85■■□□□ 1.57
CHFR-222ENST00000544093 DDX6P26196 483 aaKnown RBP eCLIP24.85■■□□□ 1.57
CHFR-222ENST00000544093 STARD6P59095 220 aa24.85■■□□□ 1.57
CHFR-222ENST00000544093 MLF2Q15773 248 aaPredicted RBP24.85■■□□□ 1.57
CHFR-222ENST00000544093 MYCBPAPQ8TBZ2 947 aa24.85■■□□□ 1.57
CHFR-222ENST00000544093 IRF7Q92985 503 aa24.85■■□□□ 1.57
CHFR-222ENST00000544093 TRMT2BQ96GJ1 504 aaKnown RBP24.85■■□□□ 1.57
CHFR-222ENST00000544093 TASP1Q9H6P5 420 aa24.85■■□□□ 1.57
CHFR-222ENST00000544093 TRPV5Q9NQA5 729 aa24.85■■□□□ 1.57
CHFR-222ENST00000544093 PCDHA5Q9Y5H7 936 aa24.85■■□□□ 1.57
CHFR-222ENST00000544093 DENND4CQ5VZ89 1909 aa24.84■■□□□ 1.57
CHFR-222ENST00000544093 NRG2O14511 850 aaPredicted RBP24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms