RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 CLNKQ7Z7G1 428 aa17.48■□□□□ 0.39
CTSB-228ENST00000533455 PPIL6Q8IXY8 311 aa17.48■□□□□ 0.39
CTSB-228ENST00000533455 ALKBH8Q96BT7 664 aaKnown RBP17.48■□□□□ 0.39
CTSB-228ENST00000533455 FRMD8P1Q9BZ68 369 aaPredicted RBP17.48■□□□□ 0.39
CTSB-228ENST00000533455 HAPLN2Q9GZV7 340 aa17.48■□□□□ 0.39
CTSB-228ENST00000533455 DENND2DQ9H6A0 471 aaPredicted RBP17.48■□□□□ 0.39
CTSB-228ENST00000533455 NPHS2Q9NP85 383 aa17.48■□□□□ 0.39
CTSB-228ENST00000533455 RBAKQ9NYW8 714 aaPredicted RBP17.48■□□□□ 0.39
CTSB-228ENST00000533455 ZFATQ9P243 1243 aa17.48■□□□□ 0.39
CTSB-228ENST00000533455 KANSL3Q9P2N6 904 aa17.48■□□□□ 0.39
CTSB-228ENST00000533455 EFR3BQ9Y2G0 817 aa17.48■□□□□ 0.39
CTSB-228ENST00000533455 F8VP50 259 aa17.48■□□□□ 0.39
CTSB-228ENST00000533455 SGK1O00141 431 aa17.48■□□□□ 0.39
CTSB-228ENST00000533455 KCNA2P16389 499 aa17.48■□□□□ 0.39
CTSB-228ENST00000533455 TSHRP16473 764 aa17.48■□□□□ 0.39
CTSB-228ENST00000533455 ADRA1DP25100 572 aa17.48■□□□□ 0.39
CTSB-228ENST00000533455 MARK3P27448 753 aa17.48■□□□□ 0.39
CTSB-228ENST00000533455 ARL4CP56559 192 aa17.48■□□□□ 0.39
CTSB-228ENST00000533455 PLEKHG4Q58EX7 1191 aa17.48■□□□□ 0.39
CTSB-228ENST00000533455 ZNF772Q68DY9 489 aaPredicted RBP17.48■□□□□ 0.39
CTSB-228ENST00000533455 SLFN12LQ6IEE8 588 aa17.48■□□□□ 0.39
CTSB-228ENST00000533455 VSIG10LQ86VR7 867 aa17.48■□□□□ 0.39
CTSB-228ENST00000533455 FLAD1Q8NFF5 587 aa17.48■□□□□ 0.39
CTSB-228ENST00000533455 MCEEQ96PE7 176 aa17.48■□□□□ 0.39
CTSB-228ENST00000533455 TMEM121Q9BTD3 319 aa17.48■□□□□ 0.39
CTSB-228ENST00000533455 OSBPL1AQ9BXW6 950 aa17.48■□□□□ 0.39
CTSB-228ENST00000533455 VPS11Q9H270 941 aa17.48■□□□□ 0.39
CTSB-228ENST00000533455 SEPT9Q9UHD8 586 aaPredicted RBP17.48■□□□□ 0.39
CTSB-228ENST00000533455 CNTNAP2Q9UHC6 1331 aa17.47■□□□□ 0.39
CTSB-228ENST00000533455 LDHAP00338 332 aaKnown RBP17.47■□□□□ 0.39
CTSB-228ENST00000533455 ACADSP16219 412 aa17.47■□□□□ 0.39
CTSB-228ENST00000533455 PRKCEQ02156 737 aa17.47■□□□□ 0.39
CTSB-228ENST00000533455 TXNRD3NBQ6F5E7 133 aa17.47■□□□□ 0.39
CTSB-228ENST00000533455 POLNQ7Z5Q5 900 aa17.47■□□□□ 0.39
CTSB-228ENST00000533455 MTDHQ86UE4 582 aaKnown RBP17.47■□□□□ 0.39
CTSB-228ENST00000533455 ANKMY2Q8IV38 441 aa17.47■□□□□ 0.39
CTSB-228ENST00000533455 NAT8LQ8N9F0 302 aa17.47■□□□□ 0.39
CTSB-228ENST00000533455 BANPQ8N9N5 519 aa17.47■□□□□ 0.39
CTSB-228ENST00000533455 TTC8Q8TAM2 541 aa17.47■□□□□ 0.39
CTSB-228ENST00000533455 PYROXD1Q8WU10 500 aa17.47■□□□□ 0.39
CTSB-228ENST00000533455 HAUS1Q96CS2 278 aa17.47■□□□□ 0.39
CTSB-228ENST00000533455 PAFAH2Q99487 392 aa17.47■□□□□ 0.39
CTSB-228ENST00000533455 TUBB6Q9BUF5 446 aa17.47■□□□□ 0.39
CTSB-228ENST00000533455 DCLRE1BQ9H816 532 aa17.47■□□□□ 0.39
CTSB-228ENST00000533455 ZNRF3Q9ULT6 936 aa17.47■□□□□ 0.39
CTSB-228ENST00000533455 LRRD1A4D1F6 860 aa17.47■□□□□ 0.39
CTSB-228ENST00000533455 C3orf70A6NLC5 250 aaPredicted RBP17.47■□□□□ 0.39
CTSB-228ENST00000533455 BANF1O75531 89 aa17.47■□□□□ 0.39
CTSB-228ENST00000533455 GCKP35557 465 aa17.47■□□□□ 0.39
CTSB-228ENST00000533455 CTCFP49711 727 aaPredicted RBP17.47■□□□□ 0.39
CTSB-228ENST00000533455 TFDP1Q14186 410 aa17.47■□□□□ 0.39
CTSB-228ENST00000533455 EFTUD2Q15029 972 aaKnown RBP eCLIP17.47■□□□□ 0.396e-10■■■■□ 23.5
CTSB-228ENST00000533455 ANO7Q6IWH7 933 aa17.47■□□□□ 0.39
CTSB-228ENST00000533455 SWSAP1Q6NVH7 229 aa17.47■□□□□ 0.39
CTSB-228ENST00000533455 LMNTD2Q8IXW0 634 aa17.47■□□□□ 0.39
CTSB-228ENST00000533455 DCAKDQ8WVC6 231 aa17.47■□□□□ 0.39
CTSB-228ENST00000533455 CPT1BQ92523 772 aa17.47■□□□□ 0.39
CTSB-228ENST00000533455 MRRFQ96E11 262 aaKnown RBP17.47■□□□□ 0.39
CTSB-228ENST00000533455 MIPEPQ99797 713 aa17.47■□□□□ 0.39
CTSB-228ENST00000533455 FAM167BQ9BTA0 163 aa17.47■□□□□ 0.39
CTSB-228ENST00000533455 NUMBLQ9Y6R0 609 aa17.47■□□□□ 0.39
CTSB-228ENST00000533455 SMAPO00193 183 aa17.46■□□□□ 0.39
CTSB-228ENST00000533455 PPP1R12AO14974 1030 aaPredicted RBP17.46■□□□□ 0.39
CTSB-228ENST00000533455 DNAJC6O75061 913 aa17.46■□□□□ 0.39
CTSB-228ENST00000533455 PTDSS1P48651 473 aaKnown RBP17.46■□□□□ 0.39
CTSB-228ENST00000533455 CCNHP51946 323 aaPredicted RBP17.46■□□□□ 0.39
CTSB-228ENST00000533455 EMC2Q15006 297 aa17.46■□□□□ 0.39
CTSB-228ENST00000533455 DCUN1D2Q6PH85 259 aa17.46■□□□□ 0.39
CTSB-228ENST00000533455 C4orf50Q6ZRC1 276 aa17.46■□□□□ 0.39
CTSB-228ENST00000533455 CCDC60Q8IWA6 550 aaPredicted RBP17.46■□□□□ 0.39
CTSB-228ENST00000533455 MTMR14Q8NCE2 650 aa17.46■□□□□ 0.39
CTSB-228ENST00000533455 RFWD2Q8NHY2 731 aa17.46■□□□□ 0.39
CTSB-228ENST00000533455 TCP10LQ8TDR4 215 aa17.46■□□□□ 0.39
CTSB-228ENST00000533455 PTCD3Q96EY7 689 aaKnown RBP17.46■□□□□ 0.39
CTSB-228ENST00000533455 WDR83Q9BRX9 315 aaKnown RBP17.46■□□□□ 0.39
CTSB-228ENST00000533455 ZNF518BQ9C0D4 1074 aa17.46■□□□□ 0.39
CTSB-228ENST00000533455 SLC24A3Q9HC58 644 aa17.46■□□□□ 0.39
CTSB-228ENST00000533455 CCDC22O60826 627 aa17.45■□□□□ 0.38
CTSB-228ENST00000533455 IFNB1P01574 187 aa17.45■□□□□ 0.38
CTSB-228ENST00000533455 LINGO3P0C6S8 592 aa17.45■□□□□ 0.38
CTSB-228ENST00000533455 SSTR1P30872 391 aa17.45■□□□□ 0.38
CTSB-228ENST00000533455 CDH5P33151 784 aaPredicted RBP17.45■□□□□ 0.38
CTSB-228ENST00000533455 MRPS35P82673 323 aaKnown RBP17.45■□□□□ 0.38
CTSB-228ENST00000533455 NCOA4Q13772 614 aa17.45■□□□□ 0.38
CTSB-228ENST00000533455 SEPT7Q16181 437 aaKnown RBP17.45■□□□□ 0.38
CTSB-228ENST00000533455 TSNAXIP1Q2TAA8 658 aa17.45■□□□□ 0.38
CTSB-228ENST00000533455 MSS51Q4VC12 460 aa17.45■□□□□ 0.38
CTSB-228ENST00000533455 FNBP1LQ5T0N5 605 aa17.45■□□□□ 0.38
CTSB-228ENST00000533455 ANKRD22Q5VYY1 191 aa17.45■□□□□ 0.38
CTSB-228ENST00000533455 CHSY1Q86X52 802 aa17.45■□□□□ 0.38
CTSB-228ENST00000533455 TTC13Q8NBP0 860 aa17.45■□□□□ 0.38
CTSB-228ENST00000533455 TMEM35BQ8NCS4 154 aa17.45■□□□□ 0.38
CTSB-228ENST00000533455 ARMC2Q8NEN0 867 aa17.45■□□□□ 0.38
CTSB-228ENST00000533455 OR5B17Q8NGF7 314 aa17.45■□□□□ 0.38
CTSB-228ENST00000533455 ADGRA2Q96PE1 1338 aa17.45■□□□□ 0.38
CTSB-228ENST00000533455 A0A0B4J269 797 aa17.45■□□□□ 0.38
CTSB-228ENST00000533455 GOLGA8SH3BPF8 625 aa17.45■□□□□ 0.38
CTSB-228ENST00000533455 GOLGA8MH3BSY2 632 aa17.45■□□□□ 0.38
CTSB-228ENST00000533455 ENTPD5O75356 428 aa17.45■□□□□ 0.38
CTSB-228ENST00000533455 HAUS5O94927 633 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms