RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 POTEHQ6S545 545 aa16.42■□□□□ 0.22
NUP50-219ENST00000497960 OSTM1Q86WC4 334 aa16.42■□□□□ 0.22
NUP50-219ENST00000497960 ZSCAN18Q8TBC5 510 aaPredicted RBP16.42■□□□□ 0.22
NUP50-219ENST00000497960 GIPC2Q8TF65 315 aa16.42■□□□□ 0.22
NUP50-219ENST00000497960 TMEM174Q8WUU8 243 aa16.42■□□□□ 0.22
NUP50-219ENST00000497960 ZSWIM3Q96MP5 696 aa16.42■□□□□ 0.22
NUP50-219ENST00000497960 GCNAQ96QF7 691 aa16.42■□□□□ 0.22
NUP50-219ENST00000497960 PI4K2AQ9BTU6 479 aa16.42■□□□□ 0.22
NUP50-219ENST00000497960 ABCB6Q9NP58 842 aa16.42■□□□□ 0.22
NUP50-219ENST00000497960 TMLHEQ9NVH6 421 aa16.42■□□□□ 0.22
NUP50-219ENST00000497960 MAN1B1Q9UKM7 699 aa16.42■□□□□ 0.22
NUP50-219ENST00000497960 FRMD4BQ9Y2L6 1034 aa16.42■□□□□ 0.22
NUP50-219ENST00000497960 BIN1O00499 593 aa16.41■□□□□ 0.22
NUP50-219ENST00000497960 NRG2O14511 850 aaPredicted RBP16.41■□□□□ 0.22
NUP50-219ENST00000497960 GALR2O43603 387 aaPredicted RBP16.41■□□□□ 0.22
NUP50-219ENST00000497960 CLSTN1O94985 981 aa16.41■□□□□ 0.22
NUP50-219ENST00000497960 CST3P01034 146 aaPredicted RBP16.41■□□□□ 0.22
NUP50-219ENST00000497960 WARSP23381 471 aaKnown RBP16.41■□□□□ 0.22
NUP50-219ENST00000497960 FCARP24071 287 aa16.41■□□□□ 0.22
NUP50-219ENST00000497960 GABRR2P28476 465 aa16.41■□□□□ 0.22
NUP50-219ENST00000497960 CDC25CP30307 473 aa16.41■□□□□ 0.22
NUP50-219ENST00000497960 ATICP31939 592 aa16.41■□□□□ 0.22
NUP50-219ENST00000497960 RPL10AP62906 217 aaKnown RBP16.41■□□□□ 0.22
NUP50-219ENST00000497960 TNNC1P63316 161 aa16.41■□□□□ 0.22
NUP50-219ENST00000497960 SLC44A4Q53GD3 710 aa16.41■□□□□ 0.22
NUP50-219ENST00000497960 CCDC183Q5T5S1 534 aa16.41■□□□□ 0.22
NUP50-219ENST00000497960 CEP135Q66GS9 1140 aa16.41■□□□□ 0.22
NUP50-219ENST00000497960 PHLDB3Q6NSJ2 640 aa16.41■□□□□ 0.22
NUP50-219ENST00000497960 LIMS2Q7Z4I7 341 aa16.41■□□□□ 0.22
NUP50-219ENST00000497960 SPATA2LQ8IUW3 424 aaPredicted RBP16.41■□□□□ 0.22
NUP50-219ENST00000497960 SPATA20Q8TB22 786 aa16.41■□□□□ 0.22
NUP50-219ENST00000497960 PARD3BQ8TEW8 1205 aa16.41■□□□□ 0.22
NUP50-219ENST00000497960 ZNF516Q92618 1163 aa16.41■□□□□ 0.22
NUP50-219ENST00000497960 SYAP1Q96A49 352 aaPredicted RBP16.41■□□□□ 0.22
NUP50-219ENST00000497960 E2F7Q96AV8 911 aa16.41■□□□□ 0.22
NUP50-219ENST00000497960 SYT15Q9BQS2 421 aa16.41■□□□□ 0.22
NUP50-219ENST00000497960 PLA2G2FQ9BZM2 168 aa16.41■□□□□ 0.22
NUP50-219ENST00000497960 SNX25Q9H3E2 840 aa16.41■□□□□ 0.22
NUP50-219ENST00000497960 ZNF334Q9HCZ1 680 aaPredicted RBP16.41■□□□□ 0.22
NUP50-219ENST00000497960 KIAA1468Q9P260 1216 aa16.41■□□□□ 0.22
NUP50-219ENST00000497960 GTF3C4Q9UKN8 822 aa16.41■□□□□ 0.22
NUP50-219ENST00000497960 CDH9Q9ULB4 789 aa16.41■□□□□ 0.22
NUP50-219ENST00000497960 TRAF3IP3Q9Y228 551 aa16.41■□□□□ 0.22
NUP50-219ENST00000497960 KMT2EQ8IZD2 1858 aa16.41■□□□□ 0.22
NUP50-219ENST00000497960 PI15O43692 258 aa16.4■□□□□ 0.22
NUP50-219ENST00000497960 FAM163BP0C2L3 166 aa16.4■□□□□ 0.22
NUP50-219ENST00000497960 PSMC3P17980 439 aa16.4■□□□□ 0.22
NUP50-219ENST00000497960 CASP4P49662 377 aa16.4■□□□□ 0.22
NUP50-219ENST00000497960 MYL6P60660 151 aa16.4■□□□□ 0.22
NUP50-219ENST00000497960 PRKCQQ04759 706 aa16.4■□□□□ 0.22
NUP50-219ENST00000497960 TCF15Q12870 199 aa16.4■□□□□ 0.22
NUP50-219ENST00000497960 MAPRE1Q15691 268 aaKnown RBP16.4■□□□□ 0.22
NUP50-219ENST00000497960 MLF2Q15773 248 aaPredicted RBP16.4■□□□□ 0.22
NUP50-219ENST00000497960 WDR72Q3MJ13 1102 aa16.4■□□□□ 0.22
NUP50-219ENST00000497960 GPR158Q5T848 1215 aa16.4■□□□□ 0.22
NUP50-219ENST00000497960 ZNF658Q5TYW1 1059 aaPredicted RBP16.4■□□□□ 0.22
NUP50-219ENST00000497960 ISM2Q6H9L7 571 aa16.4■□□□□ 0.22
NUP50-219ENST00000497960 CAVIN1Q6NZI2 390 aaKnown RBP16.4■□□□□ 0.22
NUP50-219ENST00000497960 C4orf50Q6ZRC1 276 aa16.4■□□□□ 0.22
NUP50-219ENST00000497960 GAREM2Q75VX8 874 aa16.4■□□□□ 0.22
NUP50-219ENST00000497960 SMYD4Q8IYR2 804 aaPredicted RBP16.4■□□□□ 0.22
NUP50-219ENST00000497960 GUF1Q8N442 669 aaKnown RBP16.4■□□□□ 0.22
NUP50-219ENST00000497960 DEPDC1BQ8WUY9 529 aa16.4■□□□□ 0.22
NUP50-219ENST00000497960 KBTBD7Q8WVZ9 684 aa16.4■□□□□ 0.22
NUP50-219ENST00000497960 FUBP3Q96I24 572 aaKnown RBP eCLIP16.4■□□□□ 0.22
NUP50-219ENST00000497960 TRMT61BQ9BVS5 477 aaKnown RBP16.4■□□□□ 0.22
NUP50-219ENST00000497960 GTPBP4Q9BZE4 634 aaKnown RBP16.4■□□□□ 0.22
NUP50-219ENST00000497960 GZF1Q9H116 711 aaPredicted RBP16.4■□□□□ 0.22
NUP50-219ENST00000497960 BRD9Q9H8M2 597 aa16.4■□□□□ 0.22
NUP50-219ENST00000497960 TRPV4Q9HBA0 871 aa16.4■□□□□ 0.22
NUP50-219ENST00000497960 MAPK8IP1Q9UQF2 711 aa16.4■□□□□ 0.22
NUP50-219ENST00000497960 MYBPHLA2RUH7 354 aa16.39■□□□□ 0.21
NUP50-219ENST00000497960 LRRIQ3A6PVS8 624 aaPredicted RBP16.39■□□□□ 0.21
NUP50-219ENST00000497960 HCRTO43612 131 aa16.39■□□□□ 0.21
NUP50-219ENST00000497960 TACC1O75410 805 aa16.39■□□□□ 0.21
NUP50-219ENST00000497960 STAU1O95793 577 aaKnown RBP16.39■□□□□ 0.21
NUP50-219ENST00000497960 PDGFRBP09619 1106 aa16.39■□□□□ 0.21
NUP50-219ENST00000497960 CSH1P0DML2 217 aa16.39■□□□□ 0.21
NUP50-219ENST00000497960 CSH2P0DML3 217 aa16.39■□□□□ 0.21
NUP50-219ENST00000497960 CYP2F1P24903 491 aa16.39■□□□□ 0.21
NUP50-219ENST00000497960 LMO2P25791 158 aa16.39■□□□□ 0.21
NUP50-219ENST00000497960 RPL13P26373 211 aaKnown RBP16.39■□□□□ 0.21
NUP50-219ENST00000497960 GNL1P36915 607 aaPredicted RBP16.39■□□□□ 0.21
NUP50-219ENST00000497960 VIPR2P41587 438 aa16.39■□□□□ 0.21
NUP50-219ENST00000497960 STARD6P59095 220 aa16.39■□□□□ 0.21
NUP50-219ENST00000497960 CLDN10P78369 228 aa16.39■□□□□ 0.21
NUP50-219ENST00000497960 GRM2Q14416 872 aa16.39■□□□□ 0.21
NUP50-219ENST00000497960 KLHL40Q2TBA0 621 aa16.39■□□□□ 0.21
NUP50-219ENST00000497960 CFAP221Q4G0U5 840 aa16.39■□□□□ 0.21
NUP50-219ENST00000497960 FAM171BQ6P995 826 aa16.39■□□□□ 0.21
NUP50-219ENST00000497960 TRIML1Q8N9V2 468 aa16.39■□□□□ 0.21
NUP50-219ENST00000497960 OR6B3Q8NGW1 331 aa16.39■□□□□ 0.21
NUP50-219ENST00000497960 PLEKHO2Q8TD55 490 aa16.39■□□□□ 0.21
NUP50-219ENST00000497960 TMC2Q8TDI7 906 aa16.39■□□□□ 0.21
NUP50-219ENST00000497960 DNASE1L2Q92874 299 aa16.39■□□□□ 0.21
NUP50-219ENST00000497960 PKMYT1Q99640 499 aa16.39■□□□□ 0.21
NUP50-219ENST00000497960 NXF1Q9UBU9 619 aaKnown RBP16.39■□□□□ 0.21
NUP50-219ENST00000497960 SIT1Q9Y3P8 196 aa16.39■□□□□ 0.21
NUP50-219ENST00000497960 F5P12259 2224 aa16.39■□□□□ 0.21
NUP50-219ENST00000497960 HEPACAM2A8MVW5 462 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms