RNA–Protein interactions for RNA: ENST00000492954.1

PTPRU-207, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 625 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-207ENST00000492954 NFE2Q16621 373 aaPredicted RBP19.34■□□□□ 0.69
PTPRU-207ENST00000492954 GPR158Q5T848 1215 aa19.34■□□□□ 0.69
PTPRU-207ENST00000492954 GPIHBP1Q8IV16 184 aa19.34■□□□□ 0.69
PTPRU-207ENST00000492954 FSIP1Q8NA03 581 aa19.34■□□□□ 0.69
PTPRU-207ENST00000492954 STKLD1Q8NE28 680 aa19.34■□□□□ 0.69
PTPRU-207ENST00000492954 DNASE1L2Q92874 299 aa19.34■□□□□ 0.69
PTPRU-207ENST00000492954 SCAND2PQ9GZW5 306 aaPredicted RBP19.34■□□□□ 0.69
PTPRU-207ENST00000492954 IL21Q9HBE4 155 aa19.34■□□□□ 0.69
PTPRU-207ENST00000492954 GDPD2Q9HCC8 539 aa19.34■□□□□ 0.69
PTPRU-207ENST00000492954 MTF2Q9Y483 593 aaPredicted RBP19.34■□□□□ 0.69
PTPRU-207ENST00000492954 PRPF40AO75400 957 aaKnown RBP19.33■□□□□ 0.68
PTPRU-207ENST00000492954 CST3P01034 146 aaPredicted RBP19.33■□□□□ 0.68
PTPRU-207ENST00000492954 PRR29P0C7W0 189 aa19.33■□□□□ 0.68
PTPRU-207ENST00000492954 PCSK1P29120 753 aa19.33■□□□□ 0.68
PTPRU-207ENST00000492954 PSMD2Q13200 908 aa19.33■□□□□ 0.68
PTPRU-207ENST00000492954 ARHGAP15Q53QZ3 475 aa19.33■□□□□ 0.68
PTPRU-207ENST00000492954 SDHAF4Q5VUM1 108 aa19.33■□□□□ 0.68
PTPRU-207ENST00000492954 LIMS2Q7Z4I7 341 aa19.33■□□□□ 0.68
PTPRU-207ENST00000492954 ARID3BQ8IVW6 561 aaPredicted RBP19.33■□□□□ 0.68
PTPRU-207ENST00000492954 GOLGA5Q8TBA6 731 aa19.33■□□□□ 0.68
PTPRU-207ENST00000492954 DEPDC1BQ8WUY9 529 aa19.33■□□□□ 0.68
PTPRU-207ENST00000492954 KBTBD7Q8WVZ9 684 aa19.33■□□□□ 0.68
PTPRU-207ENST00000492954 ZNF516Q92618 1163 aa19.33■□□□□ 0.68
PTPRU-207ENST00000492954 GOLPH3LQ9H4A5 285 aa19.33■□□□□ 0.68
PTPRU-207ENST00000492954 LTB4R2Q9NPC1 389 aa19.33■□□□□ 0.68
PTPRU-207ENST00000492954 GTF3C4Q9UKN8 822 aa19.33■□□□□ 0.68
PTPRU-207ENST00000492954 FAM170BA6NMN3 283 aa19.32■□□□□ 0.68
PTPRU-207ENST00000492954 RPN1P04843 607 aaKnown RBP19.32■□□□□ 0.68
PTPRU-207ENST00000492954 MYL1P05976 194 aa19.32■□□□□ 0.68
PTPRU-207ENST00000492954 CYP2F1P24903 491 aa19.32■□□□□ 0.68
PTPRU-207ENST00000492954 CASP4P49662 377 aa19.32■□□□□ 0.68
PTPRU-207ENST00000492954 DPH6Q7L8W6 267 aa19.32■□□□□ 0.68
PTPRU-207ENST00000492954 MFSD6LQ8IWD5 586 aa19.32■□□□□ 0.68
PTPRU-207ENST00000492954 PLEKHO2Q8TD55 490 aa19.32■□□□□ 0.68
PTPRU-207ENST00000492954 IRF7Q92985 503 aa19.32■□□□□ 0.68
PTPRU-207ENST00000492954 GCNAQ96QF7 691 aa19.32■□□□□ 0.68
PTPRU-207ENST00000492954 MMS19Q96T76 1030 aa19.32■□□□□ 0.68
PTPRU-207ENST00000492954 KCTD10Q9H3F6 313 aa19.32■□□□□ 0.68
PTPRU-207ENST00000492954 DMDP11532 3685 aa19.31■□□□□ 0.68
PTPRU-207ENST00000492954 A0A1W2PQ27 194 aa19.31■□□□□ 0.68
PTPRU-207ENST00000492954 A0A1W2PQ64 194 aa19.31■□□□□ 0.68
PTPRU-207ENST00000492954 A0A1W2PQD8 194 aa19.31■□□□□ 0.68
PTPRU-207ENST00000492954 MYBPHLA2RUH7 354 aa19.31■□□□□ 0.68
PTPRU-207ENST00000492954 SHISA7A6NL88 538 aa19.31■□□□□ 0.68
PTPRU-207ENST00000492954 ZNF263O14978 683 aa19.31■□□□□ 0.68
PTPRU-207ENST00000492954 ATP2C2O75185 946 aa19.31■□□□□ 0.68
PTPRU-207ENST00000492954 HMGA1P17096 107 aaKnown RBP19.31■□□□□ 0.68
PTPRU-207ENST00000492954 LMO2P25791 158 aa19.31■□□□□ 0.68
PTPRU-207ENST00000492954 TARSP26639 723 aaKnown RBP19.31■□□□□ 0.68
PTPRU-207ENST00000492954 CDC25CP30307 473 aa19.31■□□□□ 0.68
PTPRU-207ENST00000492954 NBL1P41271 181 aa19.31■□□□□ 0.68
PTPRU-207ENST00000492954 PSMC1P62191 440 aaKnown RBP19.31■□□□□ 0.68
PTPRU-207ENST00000492954 DDR2Q16832 855 aa19.31■□□□□ 0.68
PTPRU-207ENST00000492954 E2F7Q96AV8 911 aa19.31■□□□□ 0.68
PTPRU-207ENST00000492954 SYT15Q9BQS2 421 aa19.31■□□□□ 0.68
PTPRU-207ENST00000492954 TASP1Q9H6P5 420 aa19.31■□□□□ 0.68
PTPRU-207ENST00000492954 ABCB6Q9NP58 842 aa19.31■□□□□ 0.68
PTPRU-207ENST00000492954 DMAC2Q9NW81 257 aa19.31■□□□□ 0.68
PTPRU-207ENST00000492954 PROB1E7EW31 1015 aa19.3■□□□□ 0.68
PTPRU-207ENST00000492954 PRAMEF12O95522 483 aa19.3■□□□□ 0.68
PTPRU-207ENST00000492954 WARSP23381 471 aaKnown RBP19.3■□□□□ 0.68
PTPRU-207ENST00000492954 BECN1Q14457 450 aa19.3■□□□□ 0.68
PTPRU-207ENST00000492954 FAM171BQ6P995 826 aa19.3■□□□□ 0.68
PTPRU-207ENST00000492954 ZNF852Q6ZMS4 543 aa19.3■□□□□ 0.68
PTPRU-207ENST00000492954 FRMD5Q7Z6J6 570 aa19.3■□□□□ 0.68
PTPRU-207ENST00000492954 TMEM150AQ86TG1 271 aa19.3■□□□□ 0.68
PTPRU-207ENST00000492954 SPATA2LQ8IUW3 424 aaPredicted RBP19.3■□□□□ 0.68
PTPRU-207ENST00000492954 YAF2Q8IY57 180 aa19.3■□□□□ 0.68
PTPRU-207ENST00000492954 LRRC3BQ96PB8 259 aa19.3■□□□□ 0.68
PTPRU-207ENST00000492954 MRPL45Q9BRJ2 306 aaKnown RBP19.3■□□□□ 0.68
PTPRU-207ENST00000492954 OSBPL6Q9BZF3 934 aa19.3■□□□□ 0.68
PTPRU-207ENST00000492954 TRPV5Q9NQA5 729 aa19.3■□□□□ 0.68
PTPRU-207ENST00000492954 CDH9Q9ULB4 789 aa19.3■□□□□ 0.68
PTPRU-207ENST00000492954 MAGED2Q9UNF1 606 aaPredicted RBP19.3■□□□□ 0.68
PTPRU-207ENST00000492954 LRRIQ3A6PVS8 624 aaPredicted RBP19.29■□□□□ 0.68
PTPRU-207ENST00000492954 ARNTLO00327 626 aa19.29■□□□□ 0.68
PTPRU-207ENST00000492954 DPYSL4O14531 572 aa19.29■□□□□ 0.68
PTPRU-207ENST00000492954 GFRA3O60609 400 aa19.29■□□□□ 0.68
PTPRU-207ENST00000492954 F11P03951 625 aa19.29■□□□□ 0.68
PTPRU-207ENST00000492954 PDGFRBP09619 1106 aa19.29■□□□□ 0.68
PTPRU-207ENST00000492954 CSH1P0DML2 217 aa19.29■□□□□ 0.68
PTPRU-207ENST00000492954 CSH2P0DML3 217 aa19.29■□□□□ 0.68
PTPRU-207ENST00000492954 NLRP12P59046 1061 aa19.29■□□□□ 0.68
PTPRU-207ENST00000492954 MYL6P60660 151 aa19.29■□□□□ 0.68
PTPRU-207ENST00000492954 RPL10AP62906 217 aaKnown RBP19.29■□□□□ 0.68
PTPRU-207ENST00000492954 DPYDQ12882 1025 aa19.29■□□□□ 0.68
PTPRU-207ENST00000492954 TRPC3Q13507 836 aa19.29■□□□□ 0.68
PTPRU-207ENST00000492954 CFAP221Q4G0U5 840 aa19.29■□□□□ 0.68
PTPRU-207ENST00000492954 KRBA2Q6ZNG9 492 aa19.29■□□□□ 0.68
PTPRU-207ENST00000492954 SLC9A9Q8IVB4 645 aa19.29■□□□□ 0.68
PTPRU-207ENST00000492954 C1orf210Q8IVY1 113 aa19.29■□□□□ 0.68
PTPRU-207ENST00000492954 PARD3BQ8TEW8 1205 aa19.29■□□□□ 0.68
PTPRU-207ENST00000492954 MYLPFQ96A32 169 aa19.29■□□□□ 0.68
PTPRU-207ENST00000492954 FUBP3Q96I24 572 aaKnown RBP eCLIP19.29■□□□□ 0.68
PTPRU-207ENST00000492954 SLC46A2Q9BY10 475 aa19.29■□□□□ 0.68
PTPRU-207ENST00000492954 BCO2Q9BYV7 579 aa19.29■□□□□ 0.68
PTPRU-207ENST00000492954 XYLT2Q9H1B5 865 aa19.29■□□□□ 0.68
PTPRU-207ENST00000492954 CRTAC1Q9NQ79 661 aa19.29■□□□□ 0.68
PTPRU-207ENST00000492954 NME7Q9Y5B8 376 aa19.29■□□□□ 0.68
PTPRU-207ENST00000492954 F5P12259 2224 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms