RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 GZF1Q9H116 711 aaPredicted RBP16.09■□□□□ 0.17
TOM1-215ENST00000491987 GOLPH3LQ9H4A5 285 aa16.09■□□□□ 0.17
TOM1-215ENST00000491987 HEBP1Q9NRV9 189 aa16.09■□□□□ 0.17
TOM1-215ENST00000491987 DLGAP2Q9P1A6 1054 aa16.09■□□□□ 0.17
TOM1-215ENST00000491987 GTF3C4Q9UKN8 822 aa16.09■□□□□ 0.17
TOM1-215ENST00000491987 HEPACAM2A8MVW5 462 aa16.08■□□□□ 0.16
TOM1-215ENST00000491987 GABRDO14764 452 aa16.08■□□□□ 0.16
TOM1-215ENST00000491987 CST3P01034 146 aaPredicted RBP16.08■□□□□ 0.16
TOM1-215ENST00000491987 RPN1P04843 607 aaKnown RBP16.08■□□□□ 0.16
TOM1-215ENST00000491987 MYL1P05976 194 aa16.08■□□□□ 0.16
TOM1-215ENST00000491987 GLULP15104 373 aa16.08■□□□□ 0.16
TOM1-215ENST00000491987 PCSK1P29120 753 aa16.08■□□□□ 0.16
TOM1-215ENST00000491987 CASP4P49662 377 aa16.08■□□□□ 0.16
TOM1-215ENST00000491987 PSMD2Q13200 908 aa16.08■□□□□ 0.16
TOM1-215ENST00000491987 BECN1Q14457 450 aa16.08■□□□□ 0.16
TOM1-215ENST00000491987 DPH6Q7L8W6 267 aa16.08■□□□□ 0.16
TOM1-215ENST00000491987 GOLGA5Q8TBA6 731 aa16.08■□□□□ 0.16
TOM1-215ENST00000491987 PLEKHO2Q8TD55 490 aa16.08■□□□□ 0.16
TOM1-215ENST00000491987 DEPDC1BQ8WUY9 529 aa16.08■□□□□ 0.16
TOM1-215ENST00000491987 KBTBD7Q8WVZ9 684 aa16.08■□□□□ 0.16
TOM1-215ENST00000491987 ZNF516Q92618 1163 aa16.08■□□□□ 0.16
TOM1-215ENST00000491987 IL21Q9HBE4 155 aa16.08■□□□□ 0.16
TOM1-215ENST00000491987 A0A1W2PQ27 194 aa16.07■□□□□ 0.16
TOM1-215ENST00000491987 A0A1W2PQ64 194 aa16.07■□□□□ 0.16
TOM1-215ENST00000491987 A0A1W2PQD8 194 aa16.07■□□□□ 0.16
TOM1-215ENST00000491987 MYBPHLA2RUH7 354 aa16.07■□□□□ 0.16
TOM1-215ENST00000491987 ATP2C2O75185 946 aa16.07■□□□□ 0.16
TOM1-215ENST00000491987 CYP2F1P24903 491 aa16.07■□□□□ 0.16
TOM1-215ENST00000491987 CDC25CP30307 473 aa16.07■□□□□ 0.16
TOM1-215ENST00000491987 PSMC1P62191 440 aaKnown RBP16.07■□□□□ 0.16
TOM1-215ENST00000491987 DDR2Q16832 855 aa16.07■□□□□ 0.16
TOM1-215ENST00000491987 SDHAF4Q5VUM1 108 aa16.07■□□□□ 0.16
TOM1-215ENST00000491987 KRBA2Q6ZNG9 492 aa16.07■□□□□ 0.16
TOM1-215ENST00000491987 LIMS2Q7Z4I7 341 aa16.07■□□□□ 0.16
TOM1-215ENST00000491987 SPATA2LQ8IUW3 424 aaPredicted RBP16.07■□□□□ 0.16
TOM1-215ENST00000491987 ARID3BQ8IVW6 561 aaPredicted RBP16.07■□□□□ 0.16
TOM1-215ENST00000491987 MFSD6LQ8IWD5 586 aa16.07■□□□□ 0.16
TOM1-215ENST00000491987 YAF2Q8IY57 180 aa16.07■□□□□ 0.16
TOM1-215ENST00000491987 IRF7Q92985 503 aa16.07■□□□□ 0.16
TOM1-215ENST00000491987 E2F7Q96AV8 911 aa16.07■□□□□ 0.16
TOM1-215ENST00000491987 MMS19Q96T76 1030 aa16.07■□□□□ 0.16
TOM1-215ENST00000491987 SYT15Q9BQS2 421 aa16.07■□□□□ 0.16
TOM1-215ENST00000491987 KCTD10Q9H3F6 313 aa16.07■□□□□ 0.16
TOM1-215ENST00000491987 ABCB6Q9NP58 842 aa16.07■□□□□ 0.16
TOM1-215ENST00000491987 LTB4R2Q9NPC1 389 aa16.07■□□□□ 0.16
TOM1-215ENST00000491987 MAGED2Q9UNF1 606 aaPredicted RBP16.07■□□□□ 0.16
TOM1-215ENST00000491987 MTF2Q9Y483 593 aaPredicted RBP16.07■□□□□ 0.16
TOM1-215ENST00000491987 COL4A2P08572 1712 aa16.07■□□□□ 0.16
TOM1-215ENST00000491987 FAM170BA6NMN3 283 aa16.06■□□□□ 0.16
TOM1-215ENST00000491987 ZNF263O14978 683 aa16.06■□□□□ 0.16
TOM1-215ENST00000491987 HMGA1P17096 107 aaKnown RBP16.06■□□□□ 0.16
TOM1-215ENST00000491987 WARSP23381 471 aaKnown RBP16.06■□□□□ 0.16
TOM1-215ENST00000491987 LMO2P25791 158 aa16.06■□□□□ 0.16
TOM1-215ENST00000491987 TARSP26639 723 aaKnown RBP16.06■□□□□ 0.16
TOM1-215ENST00000491987 RPL10AP62906 217 aaKnown RBP16.06■□□□□ 0.16
TOM1-215ENST00000491987 TRPC3Q13507 836 aa16.06■□□□□ 0.16
TOM1-215ENST00000491987 CCDC47Q96A33 483 aaKnown RBP16.06■□□□□ 0.16
TOM1-215ENST00000491987 MRPL45Q9BRJ2 306 aaKnown RBP16.06■□□□□ 0.16
TOM1-215ENST00000491987 TASP1Q9H6P5 420 aa16.06■□□□□ 0.16
TOM1-215ENST00000491987 DMAC2Q9NW81 257 aa16.06■□□□□ 0.16
TOM1-215ENST00000491987 CDH9Q9ULB4 789 aa16.06■□□□□ 0.16
TOM1-215ENST00000491987 LRRIQ3A6PVS8 624 aaPredicted RBP16.05■□□□□ 0.16
TOM1-215ENST00000491987 PDXKO00764 312 aa16.05■□□□□ 0.16
TOM1-215ENST00000491987 DPYSL4O14531 572 aa16.05■□□□□ 0.16
TOM1-215ENST00000491987 PHACTR2O75167 634 aa16.05■□□□□ 0.16
TOM1-215ENST00000491987 CLSTN1O94985 981 aa16.05■□□□□ 0.16
TOM1-215ENST00000491987 PRAMEF12O95522 483 aa16.05■□□□□ 0.16
TOM1-215ENST00000491987 NR3C1P04150 777 aa16.05■□□□□ 0.16
TOM1-215ENST00000491987 PDGFRBP09619 1106 aa16.05■□□□□ 0.16
TOM1-215ENST00000491987 CSH1P0DML2 217 aa16.05■□□□□ 0.16
TOM1-215ENST00000491987 CSH2P0DML3 217 aa16.05■□□□□ 0.16
TOM1-215ENST00000491987 NBL1P41271 181 aa16.05■□□□□ 0.16
TOM1-215ENST00000491987 NLRP12P59046 1061 aa16.05■□□□□ 0.16
TOM1-215ENST00000491987 MYL6P60660 151 aa16.05■□□□□ 0.16
TOM1-215ENST00000491987 TNNC1P63316 161 aa16.05■□□□□ 0.16
TOM1-215ENST00000491987 DPYDQ12882 1025 aa16.05■□□□□ 0.16
TOM1-215ENST00000491987 BIRC3Q13489 604 aa16.05■□□□□ 0.16
TOM1-215ENST00000491987 WDR72Q3MJ13 1102 aa16.05■□□□□ 0.16
TOM1-215ENST00000491987 CFAP221Q4G0U5 840 aa16.05■□□□□ 0.16
TOM1-215ENST00000491987 ZNF852Q6ZMS4 543 aa16.05■□□□□ 0.16
TOM1-215ENST00000491987 FRMD5Q7Z6J6 570 aa16.05■□□□□ 0.16
TOM1-215ENST00000491987 TMEM150AQ86TG1 271 aa16.05■□□□□ 0.16
TOM1-215ENST00000491987 SLC9A9Q8IVB4 645 aa16.05■□□□□ 0.16
TOM1-215ENST00000491987 SCN4BQ8IWT1 228 aa16.05■□□□□ 0.16
TOM1-215ENST00000491987 MYLPFQ96A32 169 aa16.05■□□□□ 0.16
TOM1-215ENST00000491987 FUBP3Q96I24 572 aaKnown RBP eCLIP16.05■□□□□ 0.16
TOM1-215ENST00000491987 BCO2Q9BYV7 579 aa16.05■□□□□ 0.16
TOM1-215ENST00000491987 OSBPL6Q9BZF3 934 aa16.05■□□□□ 0.16
TOM1-215ENST00000491987 SMG9Q9H0W8 520 aaKnown RBP16.05■□□□□ 0.16
TOM1-215ENST00000491987 CRTAC1Q9NQ79 661 aa16.05■□□□□ 0.16
TOM1-215ENST00000491987 TICRRQ7Z2Z1 1910 aa16.04■□□□□ 0.16
TOM1-215ENST00000491987 NUP210Q8TEM1 1887 aaPredicted RBP16.04■□□□□ 0.16
TOM1-215ENST00000491987 SHISA7A6NL88 538 aa16.04■□□□□ 0.16
TOM1-215ENST00000491987 SLC38A8A6NNN8 435 aa16.04■□□□□ 0.16
TOM1-215ENST00000491987 GFRA3O60609 400 aa16.04■□□□□ 0.16
TOM1-215ENST00000491987 RHOBTB3O94955 611 aa16.04■□□□□ 0.16
TOM1-215ENST00000491987 ZNF202O95125 648 aa16.04■□□□□ 0.16
TOM1-215ENST00000491987 F11P03951 625 aa16.04■□□□□ 0.16
TOM1-215ENST00000491987 FCHO2Q0JRZ9 810 aa16.04■□□□□ 0.16
TOM1-215ENST00000491987 TDRD10Q5VZ19 366 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms