RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 SYAP1Q96A49 352 aaPredicted RBP25.4■■□□□ 1.66
RNF38-208ENST00000488058 ELSPBP1Q96BH3 223 aa25.4■■□□□ 1.66
RNF38-208ENST00000488058 MRPL45Q9BRJ2 306 aaKnown RBP25.4■■□□□ 1.66
RNF38-208ENST00000488058 SNX25Q9H3E2 840 aa25.4■■□□□ 1.66
RNF38-208ENST00000488058 RMND1Q9NWS8 449 aa25.4■■□□□ 1.66
RNF38-208ENST00000488058 MYBPHLA2RUH7 354 aa25.39■■□□□ 1.66
RNF38-208ENST00000488058 FGF19O95750 216 aa25.39■■□□□ 1.66
RNF38-208ENST00000488058 WARSP23381 471 aaKnown RBP25.39■■□□□ 1.66
RNF38-208ENST00000488058 FCARP24071 287 aa25.39■■□□□ 1.66
RNF38-208ENST00000488058 CYP2F1P24903 491 aa25.39■■□□□ 1.66
RNF38-208ENST00000488058 GRM2Q14416 872 aa25.39■■□□□ 1.66
RNF38-208ENST00000488058 STXBP5Q5T5C0 1151 aa25.39■■□□□ 1.66
RNF38-208ENST00000488058 SDHAF4Q5VUM1 108 aa25.39■■□□□ 1.66
RNF38-208ENST00000488058 OR6B3Q8NGW1 331 aa25.39■■□□□ 1.66
RNF38-208ENST00000488058 SMARCD2Q92925 531 aa25.39■■□□□ 1.66
RNF38-208ENST00000488058 GCNAQ96QF7 691 aa25.39■■□□□ 1.66
RNF38-208ENST00000488058 PKMYT1Q99640 499 aa25.39■■□□□ 1.66
RNF38-208ENST00000488058 CDH9Q9ULB4 789 aa25.39■■□□□ 1.66
RNF38-208ENST00000488058 SMC2O95347 1197 aa25.38■■□□□ 1.65
RNF38-208ENST00000488058 ATICP31939 592 aa25.38■■□□□ 1.65
RNF38-208ENST00000488058 VIPR2P41587 438 aa25.38■■□□□ 1.65
RNF38-208ENST00000488058 CLCN5P51795 746 aa25.38■■□□□ 1.65
RNF38-208ENST00000488058 DDR2Q16832 855 aa25.38■■□□□ 1.65
RNF38-208ENST00000488058 ZNF699Q32M78 642 aa25.38■■□□□ 1.65
RNF38-208ENST00000488058 ARHGAP15Q53QZ3 475 aa25.38■■□□□ 1.65
RNF38-208ENST00000488058 GPR158Q5T848 1215 aa25.38■■□□□ 1.65
RNF38-208ENST00000488058 GAREM2Q75VX8 874 aa25.38■■□□□ 1.65
RNF38-208ENST00000488058 LIMS2Q7Z4I7 341 aa25.38■■□□□ 1.65
RNF38-208ENST00000488058 TMEM174Q8WUU8 243 aa25.38■■□□□ 1.65
RNF38-208ENST00000488058 ELMO3Q96BJ8 720 aa25.38■■□□□ 1.65
RNF38-208ENST00000488058 PRRX2Q99811 253 aa25.38■■□□□ 1.65
RNF38-208ENST00000488058 GPR88Q9GZN0 384 aa25.38■■□□□ 1.65
RNF38-208ENST00000488058 TBC1D17Q9HA65 648 aa25.38■■□□□ 1.65
RNF38-208ENST00000488058 HOOK1Q9UJC3 728 aaKnown RBP25.38■■□□□ 1.65
RNF38-208ENST00000488058 CIZ1Q9ULV3 898 aaPredicted RBP25.38■■□□□ 1.65
RNF38-208ENST00000488058 MAGED2Q9UNF1 606 aaPredicted RBP25.38■■□□□ 1.65
RNF38-208ENST00000488058 ZDBF2Q9HCK1 2354 aa25.37■■□□□ 1.65
RNF38-208ENST00000488058 C4BPAP04003 597 aaKnown RBP25.37■■□□□ 1.65
RNF38-208ENST00000488058 RPL13P26373 211 aaKnown RBP25.37■■□□□ 1.65
RNF38-208ENST00000488058 GNL1P36915 607 aaPredicted RBP25.37■■□□□ 1.65
RNF38-208ENST00000488058 RPL10AP62906 217 aaKnown RBP25.37■■□□□ 1.65
RNF38-208ENST00000488058 CYP4F8P98187 520 aa25.37■■□□□ 1.65
RNF38-208ENST00000488058 PFKPQ01813 784 aa25.37■■□□□ 1.65
RNF38-208ENST00000488058 NCOA4Q13772 614 aa25.37■■□□□ 1.65
RNF38-208ENST00000488058 GPIHBP1Q8IV16 184 aa25.37■■□□□ 1.65
RNF38-208ENST00000488058 SCN4BQ8IWT1 228 aa25.37■■□□□ 1.65
RNF38-208ENST00000488058 TMC2Q8TDI7 906 aa25.37■■□□□ 1.65
RNF38-208ENST00000488058 SMARCE1Q969G3 411 aa25.37■■□□□ 1.65
RNF38-208ENST00000488058 MYLPFQ96A32 169 aa25.37■■□□□ 1.65
RNF38-208ENST00000488058 XYLT2Q9H1B5 865 aa25.37■■□□□ 1.65
RNF38-208ENST00000488058 ABCB6Q9NP58 842 aa25.37■■□□□ 1.65
RNF38-208ENST00000488058 PI15O43692 258 aa25.36■■□□□ 1.65
RNF38-208ENST00000488058 AKAP3O75969 853 aa25.36■■□□□ 1.65
RNF38-208ENST00000488058 STAU1O95793 577 aaKnown RBP25.36■■□□□ 1.65
RNF38-208ENST00000488058 KRT13P13646 458 aa25.36■■□□□ 1.65
RNF38-208ENST00000488058 AOC1P19801 751 aa25.36■■□□□ 1.65
RNF38-208ENST00000488058 CDC25CP30307 473 aa25.36■■□□□ 1.65
RNF38-208ENST00000488058 VAMP7P51809 220 aa25.36■■□□□ 1.65
RNF38-208ENST00000488058 CLDN10P78369 228 aa25.36■■□□□ 1.65
RNF38-208ENST00000488058 CYP27A1Q02318 531 aa25.36■■□□□ 1.65
RNF38-208ENST00000488058 ADAM9Q13443 819 aa25.36■■□□□ 1.65
RNF38-208ENST00000488058 NFIL3Q16649 462 aa25.36■■□□□ 1.65
RNF38-208ENST00000488058 ZNF667Q5HYK9 610 aa25.36■■□□□ 1.65
RNF38-208ENST00000488058 SCARA5Q6ZMJ2 495 aa25.36■■□□□ 1.65
RNF38-208ENST00000488058 C4orf50Q6ZRC1 276 aa25.36■■□□□ 1.65
RNF38-208ENST00000488058 FAM186BQ8IYM0 893 aa25.36■■□□□ 1.65
RNF38-208ENST00000488058 TIGD1Q96MW7 591 aa25.36■■□□□ 1.65
RNF38-208ENST00000488058 CRTAC1Q9NQ79 661 aa25.36■■□□□ 1.65
RNF38-208ENST00000488058 MAGEC2Q9UBF1 373 aaPredicted RBP25.36■■□□□ 1.65
RNF38-208ENST00000488058 PCDHA5Q9Y5H7 936 aa25.36■■□□□ 1.65
RNF38-208ENST00000488058 TACC1O75410 805 aa25.35■■□□□ 1.65
RNF38-208ENST00000488058 VNN1O95497 513 aa25.35■■□□□ 1.65
RNF38-208ENST00000488058 MAPRE1Q15691 268 aaKnown RBP25.35■■□□□ 1.65
RNF38-208ENST00000488058 MLF2Q15773 248 aaPredicted RBP25.35■■□□□ 1.65
RNF38-208ENST00000488058 MDH1BQ5I0G3 518 aa25.35■■□□□ 1.65
RNF38-208ENST00000488058 ZNF658Q5TYW1 1059 aaPredicted RBP25.35■■□□□ 1.65
RNF38-208ENST00000488058 FAM171BQ6P995 826 aa25.35■■□□□ 1.65
RNF38-208ENST00000488058 VITQ6UXI7 678 aa25.35■■□□□ 1.65
RNF38-208ENST00000488058 GSDMAQ96QA5 445 aa25.35■■□□□ 1.65
RNF38-208ENST00000488058 TRMT61BQ9BVS5 477 aaKnown RBP25.35■■□□□ 1.65
RNF38-208ENST00000488058 SMYD3Q9H7B4 428 aa25.35■■□□□ 1.65
RNF38-208ENST00000488058 MMRN2Q9H8L6 949 aa25.35■■□□□ 1.65
RNF38-208ENST00000488058 BRD9Q9H8M2 597 aa25.35■■□□□ 1.65
RNF38-208ENST00000488058 IL21Q9HBE4 155 aa25.35■■□□□ 1.65
RNF38-208ENST00000488058 COL4A3Q01955 1670 aa25.35■■□□□ 1.65
RNF38-208ENST00000488058 A8MXQ7 604 aa25.34■■□□□ 1.65
RNF38-208ENST00000488058 KINO60870 393 aaKnown RBP25.34■■□□□ 1.65
RNF38-208ENST00000488058 GADD45BO75293 160 aaPredicted RBP25.34■■□□□ 1.65
RNF38-208ENST00000488058 TRIM49P0CI25 452 aa25.34■■□□□ 1.65
RNF38-208ENST00000488058 TRIM49CP0CI26 452 aa25.34■■□□□ 1.65
RNF38-208ENST00000488058 CSH1P0DML2 217 aa25.34■■□□□ 1.65
RNF38-208ENST00000488058 CSH2P0DML3 217 aa25.34■■□□□ 1.65
RNF38-208ENST00000488058 PSMC2P35998 433 aaKnown RBP25.34■■□□□ 1.65
RNF38-208ENST00000488058 PIK3CAP42336 1068 aa25.34■■□□□ 1.65
RNF38-208ENST00000488058 PRCPP42785 496 aa25.34■■□□□ 1.65
RNF38-208ENST00000488058 RAP1GAPP47736 663 aa25.34■■□□□ 1.65
RNF38-208ENST00000488058 PTPN5P54829 565 aa25.34■■□□□ 1.65
RNF38-208ENST00000488058 ZACNQ401N2 412 aa25.34■■□□□ 1.65
RNF38-208ENST00000488058 CFAP221Q4G0U5 840 aa25.34■■□□□ 1.65
RNF38-208ENST00000488058 SLC44A4Q53GD3 710 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms