RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 SSU72P8A0A1W2PR75 194 aa6.34□□□□□ -1.39
USP39-213ENST00000467885 MYBPHLA2RUH7 354 aa6.34□□□□□ -1.39
USP39-213ENST00000467885 LINC01553A4QN01 128 aa6.34□□□□□ -1.39
USP39-213ENST00000467885 GRXCR2A6NFK2 248 aa6.34□□□□□ -1.39
USP39-213ENST00000467885 A8MXQ7 604 aa6.34□□□□□ -1.39
USP39-213ENST00000467885 GOLGA6L6A8MZA4 724 aa6.34□□□□□ -1.39
USP39-213ENST00000467885 ZNF263O14978 683 aa6.34□□□□□ -1.39
USP39-213ENST00000467885 SYN3O14994 580 aa6.34□□□□□ -1.39
USP39-213ENST00000467885 TRAPPC3O43617 180 aa6.34□□□□□ -1.39
USP39-213ENST00000467885 LCA5LO95447 670 aa6.34□□□□□ -1.39
USP39-213ENST00000467885 PAEPP09466 180 aa6.34□□□□□ -1.39
USP39-213ENST00000467885 FAM228BP0C875 321 aa6.34□□□□□ -1.39
USP39-213ENST00000467885 VDRP11473 427 aa6.34□□□□□ -1.39
USP39-213ENST00000467885 KRT5P13647 590 aa6.34□□□□□ -1.39
USP39-213ENST00000467885 TKTP29401 623 aaKnown RBP6.34□□□□□ -1.39
USP39-213ENST00000467885 USP8P40818 1118 aa6.34□□□□□ -1.39
USP39-213ENST00000467885 COPS2P61201 443 aa6.34□□□□□ -1.39
USP39-213ENST00000467885 ERVK-21P61565 698 aa6.34□□□□□ -1.39
USP39-213ENST00000467885 TNNC1P63316 161 aa6.34□□□□□ -1.39
USP39-213ENST00000467885 TAP1Q03518 808 aa6.34□□□□□ -1.39
USP39-213ENST00000467885 KLHL30Q0D2K2 578 aa6.34□□□□□ -1.39
USP39-213ENST00000467885 CAMK1Q14012 370 aa6.34□□□□□ -1.39
USP39-213ENST00000467885 MTF1Q14872 753 aa6.34□□□□□ -1.39
USP39-213ENST00000467885 PKDCCQ504Y2 493 aa6.34□□□□□ -1.39
USP39-213ENST00000467885 FUT10Q6P4F1 479 aa6.34□□□□□ -1.39
USP39-213ENST00000467885 CYP26C1Q6V0L0 522 aa6.34□□□□□ -1.39
USP39-213ENST00000467885 SPRED2Q7Z698 418 aa6.34□□□□□ -1.39
USP39-213ENST00000467885 ACOT1Q86TX2 421 aa6.34□□□□□ -1.39
USP39-213ENST00000467885 NOP9Q86U38 636 aaKnown RBP6.34□□□□□ -1.39
USP39-213ENST00000467885 GPIHBP1Q8IV16 184 aa6.34□□□□□ -1.39
USP39-213ENST00000467885 GPR65Q8IYL9 337 aa6.34□□□□□ -1.39
USP39-213ENST00000467885 LRRC43Q8N309 656 aa6.34□□□□□ -1.39
USP39-213ENST00000467885 KLHL23Q8NBE8 558 aa6.34□□□□□ -1.39
USP39-213ENST00000467885 RBBP8NLQ8NC74 664 aaPredicted RBP6.34□□□□□ -1.39
USP39-213ENST00000467885 OR6B3Q8NGW1 331 aa6.34□□□□□ -1.39
USP39-213ENST00000467885 SPATA18Q8TC71 538 aa6.34□□□□□ -1.39
USP39-213ENST00000467885 EPS8L1Q8TE68 723 aa6.34□□□□□ -1.39
USP39-213ENST00000467885 SLC20A1Q8WUM9 679 aa6.34□□□□□ -1.39
USP39-213ENST00000467885 B3GALT6Q96L58 329 aa6.34□□□□□ -1.39
USP39-213ENST00000467885 HEXIM2Q96MH2 286 aaKnown RBP6.34□□□□□ -1.39
USP39-213ENST00000467885 ZNF560Q96MR9 790 aa6.34□□□□□ -1.39
USP39-213ENST00000467885 ZNF558Q96NG5 402 aa6.34□□□□□ -1.39
USP39-213ENST00000467885 TMEM209Q96SK2 561 aa6.34□□□□□ -1.39
USP39-213ENST00000467885 NT5C1AQ9BXI3 368 aa6.34□□□□□ -1.39
USP39-213ENST00000467885 B3GNT5Q9BYG0 378 aa6.34□□□□□ -1.39
USP39-213ENST00000467885 DPEP3Q9H4B8 488 aa6.34□□□□□ -1.39
USP39-213ENST00000467885 CRTAC1Q9NQ79 661 aa6.34□□□□□ -1.39
USP39-213ENST00000467885 DDX43Q9NXZ2 648 aaKnown RBP6.34□□□□□ -1.39
USP39-213ENST00000467885 ADAMTS1Q9UHI8 967 aa6.34□□□□□ -1.39
USP39-213ENST00000467885 GTF3C4Q9UKN8 822 aa6.34□□□□□ -1.39
USP39-213ENST00000467885 NENFQ9UMX5 172 aa6.34□□□□□ -1.39
USP39-213ENST00000467885 YBX2Q9Y2T7 364 aaKnown RBP6.34□□□□□ -1.39
USP39-213ENST00000467885 PCDHA11Q9Y5I1 949 aa6.34□□□□□ -1.39
USP39-213ENST00000467885 EIF3CLB5ME19 914 aaKnown RBP6.33□□□□□ -1.4
USP39-213ENST00000467885 C5orf67F2Z3F1 127 aa6.33□□□□□ -1.4
USP39-213ENST00000467885 ADAM12O43184 909 aa6.33□□□□□ -1.4
USP39-213ENST00000467885 FGF18O76093 207 aa6.33□□□□□ -1.4
USP39-213ENST00000467885 CXCL14O95715 111 aa6.33□□□□□ -1.4
USP39-213ENST00000467885 CYP1A1P04798 512 aaPredicted RBP6.33□□□□□ -1.4
USP39-213ENST00000467885 RB1P06400 928 aa6.33□□□□□ -1.4
USP39-213ENST00000467885 MMEP08473 750 aa6.33□□□□□ -1.4
USP39-213ENST00000467885 TPM1P09493 284 aa6.33□□□□□ -1.4
USP39-213ENST00000467885 CCDC172P0C7W6 258 aa6.33□□□□□ -1.4
USP39-213ENST00000467885 GZMAP12544 262 aa6.33□□□□□ -1.4
USP39-213ENST00000467885 UNGP13051 313 aaPredicted RBP6.33□□□□□ -1.4
USP39-213ENST00000467885 LAG3P18627 525 aa6.33□□□□□ -1.4
USP39-213ENST00000467885 TNFAIP3P21580 790 aa6.33□□□□□ -1.4
USP39-213ENST00000467885 ACAT1P24752 427 aaKnown RBP6.33□□□□□ -1.4
USP39-213ENST00000467885 DNAJB1P25685 340 aa6.33□□□□□ -1.4
USP39-213ENST00000467885 GGCXP38435 758 aa6.33□□□□□ -1.4
USP39-213ENST00000467885 GPD2P43304 727 aa6.33□□□□□ -1.4
USP39-213ENST00000467885 ERVFC1P60507 584 aa6.33□□□□□ -1.4
USP39-213ENST00000467885 YWHAEP62258 255 aaKnown RBP6.33□□□□□ -1.4
USP39-213ENST00000467885 FMO1Q01740 532 aa6.33□□□□□ -1.4
USP39-213ENST00000467885 CDR2Q01850 454 aa6.33□□□□□ -1.4
USP39-213ENST00000467885 DSG1Q02413 1049 aa6.33□□□□□ -1.4
USP39-213ENST00000467885 KRT17Q04695 432 aa6.33□□□□□ -1.4
USP39-213ENST00000467885 ORC1Q13415 861 aa6.33□□□□□ -1.4
USP39-213ENST00000467885 ASIC2Q16515 512 aa6.33□□□□□ -1.4
USP39-213ENST00000467885 USP41Q3LFD5 358 aa6.33□□□□□ -1.4
USP39-213ENST00000467885 HS1BP3Q53T59 392 aa6.33□□□□□ -1.4
USP39-213ENST00000467885 RTP2Q5QGT7 225 aa6.33□□□□□ -1.4
USP39-213ENST00000467885 SPOUT1Q5T280 376 aaKnown RBP6.33□□□□□ -1.4
USP39-213ENST00000467885 PPP1R26Q5T8A7 1209 aaPredicted RBP6.33□□□□□ -1.4
USP39-213ENST00000467885 ARHGAP17Q68EM7 881 aa6.33□□□□□ -1.4
USP39-213ENST00000467885 LCLAT1Q6UWP7 414 aa6.33□□□□□ -1.4
USP39-213ENST00000467885 SCARA5Q6ZMJ2 495 aa6.33□□□□□ -1.4
USP39-213ENST00000467885 METTL23Q86XA0 190 aa6.33□□□□□ -1.4
USP39-213ENST00000467885 CEP57Q86XR8 500 aa6.33□□□□□ -1.4
USP39-213ENST00000467885 ZNF677Q86XU0 584 aa6.33□□□□□ -1.4
USP39-213ENST00000467885 PALB2Q86YC2 1186 aa6.33□□□□□ -1.4
USP39-213ENST00000467885 GLYCTKQ8IVS8 523 aa6.33□□□□□ -1.4
USP39-213ENST00000467885 CCDC170Q8IYT3 715 aa6.33□□□□□ -1.4
USP39-213ENST00000467885 ADGRF2Q8IZF7 708 aa6.33□□□□□ -1.4
USP39-213ENST00000467885 THEM5Q8N1Q8 247 aa6.33□□□□□ -1.4
USP39-213ENST00000467885 MRPL43Q8N983 215 aaKnown RBP6.33□□□□□ -1.4
USP39-213ENST00000467885 OR10T2Q8NGX3 314 aa6.33□□□□□ -1.4
USP39-213ENST00000467885 UBA3Q8TBC4 463 aa6.33□□□□□ -1.4
USP39-213ENST00000467885 MYCBPAPQ8TBZ2 947 aa6.33□□□□□ -1.4
USP39-213ENST00000467885 SLC35F5Q8WV83 523 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms