RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 SLC6A4P31645 630 aa3.6□□□□□ -1.83
HMGB1P9-201ENST00000429856 AVPR1BP47901 424 aa3.6□□□□□ -1.83
HMGB1P9-201ENST00000429856 CASP5P51878 434 aa3.6□□□□□ -1.83
HMGB1P9-201ENST00000429856 CXADRP78310 365 aa3.6□□□□□ -1.83
HMGB1P9-201ENST00000429856 ZNF844Q08AG5 666 aa3.6□□□□□ -1.83
HMGB1P9-201ENST00000429856 FOXD4Q12950 439 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P9-201ENST00000429856 KRT72Q14CN4 511 aa3.6□□□□□ -1.83
HMGB1P9-201ENST00000429856 ANO6Q4KMQ2 910 aa3.6□□□□□ -1.83
HMGB1P9-201ENST00000429856 PAPD7Q5XG87 772 aaKnown RBP3.6□□□□□ -1.83
HMGB1P9-201ENST00000429856 B3GNTL1Q67FW5 361 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P9-201ENST00000429856 DARS2Q6PI48 645 aaKnown RBP3.6□□□□□ -1.83
HMGB1P9-201ENST00000429856 FAM90A1Q86YD7 464 aa3.6□□□□□ -1.83
HMGB1P9-201ENST00000429856 COLGALT2Q8IYK4 626 aa3.6□□□□□ -1.83
HMGB1P9-201ENST00000429856 KRT78Q8N1N4 520 aa3.6□□□□□ -1.83
HMGB1P9-201ENST00000429856 OR2C3Q8N628 320 aa3.6□□□□□ -1.83
HMGB1P9-201ENST00000429856 CELF5Q8N6W0 485 aaKnown RBP3.6□□□□□ -1.83
HMGB1P9-201ENST00000429856 DEPTORQ8TB45 409 aa3.6□□□□□ -1.83
HMGB1P9-201ENST00000429856 LRTOMTQ8WZ04 291 aa3.6□□□□□ -1.83
HMGB1P9-201ENST00000429856 DDX17Q92841 729 aaKnown RBP3.6□□□□□ -1.83
HMGB1P9-201ENST00000429856 SCAMP4Q969E2 229 aa3.6□□□□□ -1.83
HMGB1P9-201ENST00000429856 RNF31Q96EP0 1072 aa3.6□□□□□ -1.83
HMGB1P9-201ENST00000429856 ZSWIM1Q9BR11 485 aa3.6□□□□□ -1.83
HMGB1P9-201ENST00000429856 HERPUD2Q9BSE4 406 aa3.6□□□□□ -1.83
HMGB1P9-201ENST00000429856 MLST8Q9BVC4 326 aa3.6□□□□□ -1.83
HMGB1P9-201ENST00000429856 ALOXE3Q9BYJ1 711 aa3.6□□□□□ -1.83
HMGB1P9-201ENST00000429856 C22orf23Q9BZE7 217 aa3.6□□□□□ -1.83
HMGB1P9-201ENST00000429856 WDR12Q9GZL7 423 aaKnown RBP3.6□□□□□ -1.83
HMGB1P9-201ENST00000429856 TOR3AQ9H497 397 aa3.6□□□□□ -1.83
HMGB1P9-201ENST00000429856 BRD9Q9H8M2 597 aa3.6□□□□□ -1.83
HMGB1P9-201ENST00000429856 SARS2Q9NP81 518 aaKnown RBP3.6□□□□□ -1.83
HMGB1P9-201ENST00000429856 PNPOQ9NVS9 261 aa3.6□□□□□ -1.83
HMGB1P9-201ENST00000429856 NR2E3Q9Y5X4 410 aa3.6□□□□□ -1.83
HMGB1P9-201ENST00000429856 KAT6BQ8WYB5 2073 aa3.59□□□□□ -1.83
HMGB1P9-201ENST00000429856 CCDC195A0A1B0GUA6 201 aa3.59□□□□□ -1.83
HMGB1P9-201ENST00000429856 PIPSLA2A3N6 862 aa3.59□□□□□ -1.83
HMGB1P9-201ENST00000429856 CAPN8A6NHC0 703 aa3.59□□□□□ -1.83
HMGB1P9-201ENST00000429856 E7ENX8 843 aa3.59□□□□□ -1.83
HMGB1P9-201ENST00000429856 H3BUI4 141 aa3.59□□□□□ -1.83
HMGB1P9-201ENST00000429856 GOLIM4O00461 696 aa3.59□□□□□ -1.83
HMGB1P9-201ENST00000429856 NPHP1O15259 732 aa3.59□□□□□ -1.83
HMGB1P9-201ENST00000429856 GNAI2P04899 355 aa3.59□□□□□ -1.83
HMGB1P9-201ENST00000429856 GJB1P08034 283 aa3.59□□□□□ -1.83
HMGB1P9-201ENST00000429856 RARBP10826 455 aa3.59□□□□□ -1.83
HMGB1P9-201ENST00000429856 TNFSF4P23510 183 aa3.59□□□□□ -1.83
HMGB1P9-201ENST00000429856 CHKAP35790 457 aa3.59□□□□□ -1.83
HMGB1P9-201ENST00000429856 KRTAP10-7P60409 375 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P9-201ENST00000429856 POU6F2P78424 691 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P9-201ENST00000429856 NKX6-1P78426 367 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P9-201ENST00000429856 TAP2Q03519 686 aa3.59□□□□□ -1.83
HMGB1P9-201ENST00000429856 LMOD3Q0VAK6 560 aa3.59□□□□□ -1.83
HMGB1P9-201ENST00000429856 KIF22Q14807 665 aa3.59□□□□□ -1.83
HMGB1P9-201ENST00000429856 OLFML1Q6UWY5 402 aa3.59□□□□□ -1.83
HMGB1P9-201ENST00000429856 LDHAL6AQ6ZMR3 332 aa3.59□□□□□ -1.83
HMGB1P9-201ENST00000429856 MICALCLQ6ZW33 695 aa3.59□□□□□ -1.83
HMGB1P9-201ENST00000429856 CLNKQ7Z7G1 428 aa3.59□□□□□ -1.83
HMGB1P9-201ENST00000429856 LIX1LQ8IVB5 337 aa3.59□□□□□ -1.83
HMGB1P9-201ENST00000429856 CPXCR1Q8N123 301 aa3.59□□□□□ -1.83
HMGB1P9-201ENST00000429856 LCORLQ8N3X6 602 aa3.59□□□□□ -1.83
HMGB1P9-201ENST00000429856 NME8Q8N427 588 aa3.59□□□□□ -1.83
HMGB1P9-201ENST00000429856 SLC35A4Q96G79 324 aa3.59□□□□□ -1.83
HMGB1P9-201ENST00000429856 COQ10AQ96MF6 247 aa3.59□□□□□ -1.83
HMGB1P9-201ENST00000429856 KLHL32Q96NJ5 620 aa3.59□□□□□ -1.83
HMGB1P9-201ENST00000429856 ADAM2Q99965 735 aa3.59□□□□□ -1.83
HMGB1P9-201ENST00000429856 IMPG2Q9BZV3 1241 aa3.59□□□□□ -1.83
HMGB1P9-201ENST00000429856 SERHL2Q9H4I8 314 aa3.59□□□□□ -1.83
HMGB1P9-201ENST00000429856 ARMT1Q9H993 441 aa3.59□□□□□ -1.83
HMGB1P9-201ENST00000429856 ZMAT3Q9HA38 289 aaKnown RBP3.59□□□□□ -1.83
HMGB1P9-201ENST00000429856 CYP4F11Q9HBI6 524 aa3.59□□□□□ -1.83
HMGB1P9-201ENST00000429856 GPR35Q9HC97 309 aa3.59□□□□□ -1.83
HMGB1P9-201ENST00000429856 CNNM1Q9NRU3 951 aa3.59□□□□□ -1.83
HMGB1P9-201ENST00000429856 CDYLQ9Y232 598 aa3.59□□□□□ -1.83
HMGB1P9-201ENST00000429856 MAP3K2Q9Y2U5 619 aa3.59□□□□□ -1.83
HMGB1P9-201ENST00000429856 COX11Q9Y6N1 276 aa3.59□□□□□ -1.83
HMGB1P9-201ENST00000429856 DGKBQ9Y6T7 804 aa3.59□□□□□ -1.83
HMGB1P9-201ENST00000429856 AATKQ6ZMQ8 1374 aa3.59□□□□□ -1.83
HMGB1P9-201ENST00000429856 hCG_1642624A0A1W2PR95 340 aa3.58□□□□□ -1.84
HMGB1P9-201ENST00000429856 A0A1W2PS29 197 aa3.58□□□□□ -1.84
HMGB1P9-201ENST00000429856 CFAP69A5D8W1 941 aa3.58□□□□□ -1.84
HMGB1P9-201ENST00000429856 ZNF785A8K8V0 405 aa3.58□□□□□ -1.84
HMGB1P9-201ENST00000429856 F8W8V4 182 aa3.58□□□□□ -1.84
HMGB1P9-201ENST00000429856 KIAA0355O15063 1070 aa3.58□□□□□ -1.84
HMGB1P9-201ENST00000429856 LPXNO60711 386 aa3.58□□□□□ -1.84
HMGB1P9-201ENST00000429856 SPDEFO95238 335 aa3.58□□□□□ -1.84
HMGB1P9-201ENST00000429856 CENPBP07199 599 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P9-201ENST00000429856 HKR1P10072 659 aa3.58□□□□□ -1.84
HMGB1P9-201ENST00000429856 EGR2P11161 476 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P9-201ENST00000429856 KCNA2P16389 499 aa3.58□□□□□ -1.84
HMGB1P9-201ENST00000429856 TSHRP16473 764 aa3.58□□□□□ -1.84
HMGB1P9-201ENST00000429856 PPM1AP35813 382 aa3.58□□□□□ -1.84
HMGB1P9-201ENST00000429856 ZEB1P37275 1124 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P9-201ENST00000429856 RENBPP51606 427 aa3.58□□□□□ -1.84
HMGB1P9-201ENST00000429856 VAV2P52735 878 aa3.58□□□□□ -1.84
HMGB1P9-201ENST00000429856 RPS7P62081 194 aaKnown RBP3.58□□□□□ -1.84
HMGB1P9-201ENST00000429856 RAB1AP62820 205 aa3.58□□□□□ -1.84
HMGB1P9-201ENST00000429856 TP53BP2Q13625 1128 aa3.58□□□□□ -1.84
HMGB1P9-201ENST00000429856 SIM2Q14190 667 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P9-201ENST00000429856 PLS1Q14651 629 aa3.58□□□□□ -1.84
HMGB1P9-201ENST00000429856 CYP2A13Q16696 494 aa3.58□□□□□ -1.84
HMGB1P9-201ENST00000429856 EMC10Q5UCC4 262 aa3.58□□□□□ -1.84
HMGB1P9-201ENST00000429856 SP5Q6BEB4 398 aaPredicted RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms