RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 CASKIN2Q8WXE0 1202 aa28.03■■■□□ 2.08
LDB1-202ENST00000425280 PADI3Q9ULW8 664 aa28.03■■■□□ 2.08
LDB1-202ENST00000425280 GOLGA8SH3BPF8 625 aa28.03■■■□□ 2.08
LDB1-202ENST00000425280 INHAP05111 366 aa28.03■■■□□ 2.08
LDB1-202ENST00000425280 CD52P31358 61 aa28.03■■■□□ 2.08
LDB1-202ENST00000425280 GSCP56915 257 aaPredicted RBP28.03■■■□□ 2.08
LDB1-202ENST00000425280 PSMC1P62191 440 aaKnown RBP28.03■■■□□ 2.08
LDB1-202ENST00000425280 PPP2R5EQ16537 467 aa28.03■■■□□ 2.08
LDB1-202ENST00000425280 TRIM71Q2Q1W2 868 aaKnown RBP28.03■■■□□ 2.08
LDB1-202ENST00000425280 UNC93AQ86WB7 457 aa28.03■■■□□ 2.08
LDB1-202ENST00000425280 OR6B3Q8NGW1 331 aa28.03■■■□□ 2.08
LDB1-202ENST00000425280 CCDC26Q8TAB7 109 aa28.03■■■□□ 2.08
LDB1-202ENST00000425280 LCMT1Q9UIC8 334 aa28.03■■■□□ 2.08
LDB1-202ENST00000425280 TCRBV7S2A1N4TA0A589 114 aa28.02■■■□□ 2.08
LDB1-202ENST00000425280 BHMG1C9JSJ3 638 aaPredicted RBP28.02■■■□□ 2.08
LDB1-202ENST00000425280 GHRP10912 638 aa28.02■■■□□ 2.08
LDB1-202ENST00000425280 LRPAP1P30533 357 aa28.02■■■□□ 2.08
LDB1-202ENST00000425280 GABRB2P47870 512 aa28.02■■■□□ 2.08
LDB1-202ENST00000425280 CARSP49589 748 aaKnown RBP28.02■■■□□ 2.08
LDB1-202ENST00000425280 STILQ15468 1287 aa28.02■■■□□ 2.08
LDB1-202ENST00000425280 HACE1Q8IYU2 909 aa28.02■■■□□ 2.08
LDB1-202ENST00000425280 PRELID2Q8N945 189 aa28.02■■■□□ 2.08
LDB1-202ENST00000425280 KBTBD7Q8WVZ9 684 aa28.02■■■□□ 2.08
LDB1-202ENST00000425280 PLVAPQ9BX97 442 aa28.02■■■□□ 2.08
LDB1-202ENST00000425280 SYNCQ9H7C4 482 aa28.02■■■□□ 2.08
LDB1-202ENST00000425280 WDR35Q9P2L0 1181 aa28.02■■■□□ 2.08
LDB1-202ENST00000425280 NOD1Q9Y239 953 aa28.02■■■□□ 2.08
LDB1-202ENST00000425280 SIGLEC16A6NMB1 481 aa28.01■■■□□ 2.07
LDB1-202ENST00000425280 PFKMP08237 780 aa28.01■■■□□ 2.07
LDB1-202ENST00000425280 GOLGA7BQ2TAP0 167 aa28.01■■■□□ 2.07
LDB1-202ENST00000425280 SV2CQ496J9 727 aa28.01■■■□□ 2.07
LDB1-202ENST00000425280 PPP1R26Q5T8A7 1209 aaPredicted RBP28.01■■■□□ 2.07
LDB1-202ENST00000425280 LIMS2Q7Z4I7 341 aa28.01■■■□□ 2.07
LDB1-202ENST00000425280 MAATS1Q7Z4T9 603 aa28.01■■■□□ 2.07
LDB1-202ENST00000425280 GSTCDQ8NEC7 633 aa28.01■■■□□ 2.07
LDB1-202ENST00000425280 MLH1P40692 756 aa28.01■■■□□ 2.07
LDB1-202ENST00000425280 TNNT3P45378 269 aaPredicted RBP28.01■■■□□ 2.07
LDB1-202ENST00000425280 ZNF268Q14587 947 aaPredicted RBP28.01■■■□□ 2.07
LDB1-202ENST00000425280 LPIN1Q14693 890 aa28.01■■■□□ 2.07
LDB1-202ENST00000425280 TRADDQ15628 312 aa28.01■■■□□ 2.07
LDB1-202ENST00000425280 LHX8Q68G74 356 aa28.01■■■□□ 2.07
LDB1-202ENST00000425280 KRT222Q8N1A0 295 aa28.01■■■□□ 2.07
LDB1-202ENST00000425280 LPPQ93052 612 aa28.01■■■□□ 2.07
LDB1-202ENST00000425280 GDAP1L1Q96MZ0 367 aa28.01■■■□□ 2.07
LDB1-202ENST00000425280 TTI1O43156 1089 aa28■■■□□ 2.07
LDB1-202ENST00000425280 PHF2O75151 1096 aa28■■■□□ 2.07
LDB1-202ENST00000425280 FGFR1P11362 822 aa28■■■□□ 2.07
LDB1-202ENST00000425280 KRT3P12035 628 aa28■■■□□ 2.07
LDB1-202ENST00000425280 LILRA4P59901 499 aa28■■■□□ 2.07
LDB1-202ENST00000425280 PAK2Q13177 524 aa28■■■□□ 2.07
LDB1-202ENST00000425280 SIX1Q15475 284 aaPredicted RBP28■■■□□ 2.07
LDB1-202ENST00000425280 FAM26DQ5JW98 314 aa28■■■□□ 2.07
LDB1-202ENST00000425280 IFT81Q8WYA0 676 aa28■■■□□ 2.07
LDB1-202ENST00000425280 GAD1Q99259 594 aa28■■■□□ 2.07
LDB1-202ENST00000425280 DPEP3Q9H4B8 488 aa28■■■□□ 2.07
LDB1-202ENST00000425280 MOXD2PA6NHM9 499 aa27.99■■■□□ 2.07
LDB1-202ENST00000425280 A8MXQ7 604 aa27.99■■■□□ 2.07
LDB1-202ENST00000425280 F8VP50 259 aa27.99■■■□□ 2.07
LDB1-202ENST00000425280 HCRTO43612 131 aa27.99■■■□□ 2.07
LDB1-202ENST00000425280 MGEA5O60502 916 aa27.99■■■□□ 2.07
LDB1-202ENST00000425280 FKTNO75072 461 aa27.99■■■□□ 2.07
LDB1-202ENST00000425280 RFC1P35251 1148 aaPredicted RBP27.99■■■□□ 2.07
LDB1-202ENST00000425280 SSR1P43307 286 aaKnown RBP27.99■■■□□ 2.07
LDB1-202ENST00000425280 EPHB4P54760 987 aa27.99■■■□□ 2.07
LDB1-202ENST00000425280 PIGHQ14442 188 aaPredicted RBP27.99■■■□□ 2.07
LDB1-202ENST00000425280 ZNF618Q5T7W0 954 aa27.99■■■□□ 2.07
LDB1-202ENST00000425280 MRPL10Q7Z7H8 261 aaKnown RBP27.99■■■□□ 2.07
LDB1-202ENST00000425280 KATNAL2Q8IYT4 538 aa27.99■■■□□ 2.07
LDB1-202ENST00000425280 NIPA2Q8N8Q9 360 aa27.99■■■□□ 2.07
LDB1-202ENST00000425280 JOSD2Q8TAC2 188 aa27.99■■■□□ 2.07
LDB1-202ENST00000425280 FAM49BQ9NUQ9 324 aa27.99■■■□□ 2.07
LDB1-202ENST00000425280 A0A0U1RQG5 324 aaPredicted RBP27.99■■■□□ 2.07
LDB1-202ENST00000425280 FSCN2O14926 492 aa27.99■■■□□ 2.07
LDB1-202ENST00000425280 PKDCCQ504Y2 493 aa27.99■■■□□ 2.07
LDB1-202ENST00000425280 SLAIN1Q8ND83 568 aa27.99■■■□□ 2.07
LDB1-202ENST00000425280 APPL2Q8NEU8 664 aa27.99■■■□□ 2.07
LDB1-202ENST00000425280 ZNF296Q8WUU4 475 aaPredicted RBP27.99■■■□□ 2.07
LDB1-202ENST00000425280 MCRS1Q96EZ8 462 aa27.99■■■□□ 2.07
LDB1-202ENST00000425280 GLT1D1Q96MS3 346 aa27.99■■■□□ 2.07
LDB1-202ENST00000425280 NFU1Q9UMS0 254 aa27.99■■■□□ 2.07
LDB1-202ENST00000425280 RARAP10276 462 aa27.98■■■□□ 2.07
LDB1-202ENST00000425280 TCF4P15884 667 aa27.98■■■□□ 2.07
LDB1-202ENST00000425280 GNL1P36915 607 aaPredicted RBP27.98■■■□□ 2.07
LDB1-202ENST00000425280 AFF1P51825 1210 aaKnown RBP27.98■■■□□ 2.07
LDB1-202ENST00000425280 HTRA3P83110 453 aa27.98■■■□□ 2.07
LDB1-202ENST00000425280 DSC3Q14574 896 aa27.98■■■□□ 2.07
LDB1-202ENST00000425280 AGMOQ6ZNB7 445 aa27.98■■■□□ 2.07
LDB1-202ENST00000425280 TTC30AQ86WT1 665 aa27.98■■■□□ 2.07
LDB1-202ENST00000425280 LPIN3Q9BQK8 851 aa27.98■■■□□ 2.07
LDB1-202ENST00000425280 TSEN34Q9BSV6 310 aaKnown RBP27.98■■■□□ 2.07
LDB1-202ENST00000425280 HMX1Q9NP08 348 aaPredicted RBP27.98■■■□□ 2.07
LDB1-202ENST00000425280 SLC38A7Q9NVC3 462 aa27.98■■■□□ 2.07
LDB1-202ENST00000425280 SLTMQ9NWH9 1034 aaKnown RBP eCLIP27.98■■■□□ 2.07
LDB1-202ENST00000425280 MTUS1Q9ULD2 1270 aa27.98■■■□□ 2.07
LDB1-202ENST00000425280 GIT1Q9Y2X7 761 aa27.98■■■□□ 2.07
LDB1-202ENST00000425280 CBX1P83916 185 aa27.98■■■□□ 2.07
LDB1-202ENST00000425280 LLGL1Q15334 1064 aa27.98■■■□□ 2.07
LDB1-202ENST00000425280 CYP1B1Q16678 543 aa27.98■■■□□ 2.07
LDB1-202ENST00000425280 ST7Q9NRC1 585 aa27.98■■■□□ 2.07
LDB1-202ENST00000425280 METTL5Q9NRN9 209 aaKnown RBP27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms