RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 KBTBD7Q8WVZ9 684 aa18.7■□□□□ 0.58
CTTN-203ENST00000376561 LPPQ93052 612 aa18.7■□□□□ 0.58
CTTN-203ENST00000376561 TRAIPQ9BWF2 469 aa18.7■□□□□ 0.58
CTTN-203ENST00000376561 PLEKHA4Q9H4M7 779 aa18.7■□□□□ 0.58
CTTN-203ENST00000376561 SLC38A7Q9NVC3 462 aa18.7■□□□□ 0.58
CTTN-203ENST00000376561 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.7■□□□□ 0.58
CTTN-203ENST00000376561 A8MXQ7 604 aa18.7■□□□□ 0.58
CTTN-203ENST00000376561 MGEA5O60502 916 aa18.7■□□□□ 0.58
CTTN-203ENST00000376561 SASH3O75995 380 aa18.7■□□□□ 0.58
CTTN-203ENST00000376561 ERBB2P04626 1255 aa18.7■□□□□ 0.58
CTTN-203ENST00000376561 GSCP56915 257 aaPredicted RBP18.7■□□□□ 0.58
CTTN-203ENST00000376561 LILRA4P59901 499 aa18.7■□□□□ 0.58
CTTN-203ENST00000376561 PSMC1P62191 440 aaKnown RBP18.7■□□□□ 0.58
CTTN-203ENST00000376561 ZNF252P-AS1Q0IIN9 211 aa18.7■□□□□ 0.58
CTTN-203ENST00000376561 PPP1R26Q5T8A7 1209 aaPredicted RBP18.7■□□□□ 0.58
CTTN-203ENST00000376561 AGMOQ6ZNB7 445 aa18.7■□□□□ 0.58
CTTN-203ENST00000376561 MRPL10Q7Z7H8 261 aaKnown RBP18.7■□□□□ 0.58
CTTN-203ENST00000376561 PLVAPQ9BX97 442 aa18.7■□□□□ 0.58
CTTN-203ENST00000376561 SLITRK6Q9H5Y7 841 aa18.7■□□□□ 0.58
CTTN-203ENST00000376561 SYNCQ9H7C4 482 aa18.7■□□□□ 0.58
CTTN-203ENST00000376561 SAGE1Q9NXZ1 904 aa18.7■□□□□ 0.58
CTTN-203ENST00000376561 WDR35Q9P2L0 1181 aa18.7■□□□□ 0.58
CTTN-203ENST00000376561 LCMT1Q9UIC8 334 aa18.7■□□□□ 0.58
CTTN-203ENST00000376561 GIT1Q9Y2X7 761 aa18.7■□□□□ 0.58
CTTN-203ENST00000376561 GOLGA6L10A0A0M3HER8 536 aa18.69■□□□□ 0.58
CTTN-203ENST00000376561 A0A1W2PQ45 241 aaPredicted RBP18.69■□□□□ 0.58
CTTN-203ENST00000376561 A0A1W2PQY0 241 aa18.69■□□□□ 0.58
CTTN-203ENST00000376561 HSPA6P17066 643 aa18.69■□□□□ 0.58
CTTN-203ENST00000376561 GABRB2P47870 512 aa18.69■□□□□ 0.58
CTTN-203ENST00000376561 AFF1P51825 1210 aaKnown RBP18.69■□□□□ 0.58
CTTN-203ENST00000376561 DSC3Q14574 896 aa18.69■□□□□ 0.58
CTTN-203ENST00000376561 LIMS2Q7Z4I7 341 aa18.69■□□□□ 0.58
CTTN-203ENST00000376561 XYLT1Q86Y38 959 aa18.69■□□□□ 0.58
CTTN-203ENST00000376561 RHOT1Q8IXI2 618 aa18.69■□□□□ 0.58
CTTN-203ENST00000376561 GSPT2Q8IYD1 628 aaKnown RBP18.69■□□□□ 0.58
CTTN-203ENST00000376561 APPL2Q8NEU8 664 aa18.69■□□□□ 0.58
CTTN-203ENST00000376561 DDX27Q96GQ7 796 aaKnown RBP18.69■□□□□ 0.58
CTTN-203ENST00000376561 GDF3Q9NR23 364 aa18.69■□□□□ 0.58
CTTN-203ENST00000376561 USTQ9Y2C2 406 aa18.69■□□□□ 0.58
CTTN-203ENST00000376561 PTCH2Q9Y6C5 1203 aa18.69■□□□□ 0.58
CTTN-203ENST00000376561 CEP350Q5VT06 3117 aa18.69■□□□□ 0.58
CTTN-203ENST00000376561 ZSCAN5CA6NGD5 496 aaPredicted RBP18.69■□□□□ 0.58
CTTN-203ENST00000376561 ARL5CA6NH57 179 aa18.69■□□□□ 0.58
CTTN-203ENST00000376561 SIGLEC16A6NMB1 481 aa18.69■□□□□ 0.58
CTTN-203ENST00000376561 GOLGA8SH3BPF8 625 aa18.69■□□□□ 0.58
CTTN-203ENST00000376561 PSTPIP1O43586 416 aa18.69■□□□□ 0.58
CTTN-203ENST00000376561 ZNF623O75123 536 aa18.69■□□□□ 0.58
CTTN-203ENST00000376561 CAND2O75155 1236 aa18.69■□□□□ 0.58
CTTN-203ENST00000376561 THP07101 528 aa18.69■□□□□ 0.58
CTTN-203ENST00000376561 FGFR1P11362 822 aa18.69■□□□□ 0.58
CTTN-203ENST00000376561 TNFRSF8P28908 595 aa18.69■□□□□ 0.58
CTTN-203ENST00000376561 RAB27AP51159 221 aa18.69■□□□□ 0.58
CTTN-203ENST00000376561 TAS2R40P59535 323 aa18.69■□□□□ 0.58
CTTN-203ENST00000376561 OGDHQ02218 1023 aa18.69■□□□□ 0.58
CTTN-203ENST00000376561 GUCY2DQ02846 1103 aa18.69■□□□□ 0.58
CTTN-203ENST00000376561 ZNF268Q14587 947 aaPredicted RBP18.69■□□□□ 0.58
CTTN-203ENST00000376561 GOLGA7BQ2TAP0 167 aa18.69■□□□□ 0.58
CTTN-203ENST00000376561 SLC13A5Q86YT5 568 aaPredicted RBP18.69■□□□□ 0.58
CTTN-203ENST00000376561 IFT20Q8IY31 132 aa18.69■□□□□ 0.58
CTTN-203ENST00000376561 TRPV6Q9H1D0 765 aa18.69■□□□□ 0.58
CTTN-203ENST00000376561 TSPYL2Q9H2G4 693 aaPredicted RBP18.69■□□□□ 0.58
CTTN-203ENST00000376561 EPB41L5Q9HCM4 733 aa18.69■□□□□ 0.58
CTTN-203ENST00000376561 MIOSQ9NXC5 875 aa18.69■□□□□ 0.58
CTTN-203ENST00000376561 AMACRQ9UHK6 382 aa18.69■□□□□ 0.58
CTTN-203ENST00000376561 HCRTO43612 131 aa18.68■□□□□ 0.58
CTTN-203ENST00000376561 PFKMP08237 780 aa18.68■□□□□ 0.58
CTTN-203ENST00000376561 KRT3P12035 628 aa18.68■□□□□ 0.58
CTTN-203ENST00000376561 YY1P25490 414 aa18.68■□□□□ 0.58
CTTN-203ENST00000376561 GNL1P36915 607 aaPredicted RBP18.68■□□□□ 0.58
CTTN-203ENST00000376561 PPP2R5EQ16537 467 aa18.68■□□□□ 0.58
CTTN-203ENST00000376561 SLC43A3Q8NBI5 491 aa18.68■□□□□ 0.58
CTTN-203ENST00000376561 DPEP3Q9H4B8 488 aa18.68■□□□□ 0.58
CTTN-203ENST00000376561 STARD7Q9NQZ5 370 aa18.68■□□□□ 0.58
CTTN-203ENST00000376561 FAM49BQ9NUQ9 324 aa18.68■□□□□ 0.58
CTTN-203ENST00000376561 SQORQ9Y6N5 450 aa18.68■□□□□ 0.58
CTTN-203ENST00000376561 A0A0U1RQF3 1178 aa18.68■□□□□ 0.58
CTTN-203ENST00000376561 HUS1O60921 280 aa18.68■□□□□ 0.58
CTTN-203ENST00000376561 CKBP12277 381 aa18.68■□□□□ 0.58
CTTN-203ENST00000376561 LMO2P25791 158 aa18.68■□□□□ 0.58
CTTN-203ENST00000376561 RFC1P35251 1148 aaPredicted RBP18.68■□□□□ 0.58
CTTN-203ENST00000376561 PIGHQ14442 188 aaPredicted RBP18.68■□□□□ 0.58
CTTN-203ENST00000376561 PKDCCQ504Y2 493 aa18.68■□□□□ 0.58
CTTN-203ENST00000376561 ZDHHC14Q8IZN3 488 aa18.68■□□□□ 0.58
CTTN-203ENST00000376561 CRYBG2Q8N1P7 616 aa18.68■□□□□ 0.58
CTTN-203ENST00000376561 CCDC26Q8TAB7 109 aa18.68■□□□□ 0.58
CTTN-203ENST00000376561 ADAM2Q99965 735 aa18.68■□□□□ 0.58
CTTN-203ENST00000376561 SNX25Q9H3E2 840 aa18.68■□□□□ 0.58
CTTN-203ENST00000376561 FAM53CQ9NYF3 392 aa18.68■□□□□ 0.58
CTTN-203ENST00000376561 TRIM17Q9Y577 477 aa18.68■□□□□ 0.58
CTTN-203ENST00000376561 F8VP50 259 aa18.67■□□□□ 0.58
CTTN-203ENST00000376561 PDGFRBP09619 1106 aa18.67■□□□□ 0.58
CTTN-203ENST00000376561 ARHGAP17Q68EM7 881 aa18.67■□□□□ 0.58
CTTN-203ENST00000376561 HDXQ7Z353 690 aa18.67■□□□□ 0.58
CTTN-203ENST00000376561 MAATS1Q7Z4T9 603 aa18.67■□□□□ 0.58
CTTN-203ENST00000376561 TTC30AQ86WT1 665 aa18.67■□□□□ 0.58
CTTN-203ENST00000376561 TOP6BLQ8N6T0 577 aa18.67■□□□□ 0.58
CTTN-203ENST00000376561 NIPA2Q8N8Q9 360 aa18.67■□□□□ 0.58
CTTN-203ENST00000376561 JOSD2Q8TAC2 188 aa18.67■□□□□ 0.58
CTTN-203ENST00000376561 IPO4Q8TEX9 1081 aaKnown RBP18.67■□□□□ 0.58
CTTN-203ENST00000376561 ST7Q9NRC1 585 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms