RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 FOXP3Q9BZS1 431 aa14.86□□□□□ -0.03
CLCNKA-202ENST00000375692 MRPL47Q9HD33 250 aaKnown RBP14.86□□□□□ -0.03
CLCNKA-202ENST00000375692 FEM1BQ9UK73 627 aa14.86□□□□□ -0.03
CLCNKA-202ENST00000375692 LOXHD1Q8IVV2 1947 aa14.86□□□□□ -0.03
CLCNKA-202ENST00000375692 A0A0G2JND7 137 aa14.85□□□□□ -0.03
CLCNKA-202ENST00000375692 CFAP69A5D8W1 941 aa14.85□□□□□ -0.03
CLCNKA-202ENST00000375692 F8VP50 259 aa14.85□□□□□ -0.03
CLCNKA-202ENST00000375692 MARK3P27448 753 aa14.85□□□□□ -0.03
CLCNKA-202ENST00000375692 GNA15P30679 374 aa14.85□□□□□ -0.03
CLCNKA-202ENST00000375692 ACOT2P49753 483 aa14.85□□□□□ -0.03
CLCNKA-202ENST00000375692 SLC18A1P54219 525 aa14.85□□□□□ -0.03
CLCNKA-202ENST00000375692 MSS51Q4VC12 460 aa14.85□□□□□ -0.03
CLCNKA-202ENST00000375692 SLC45A4Q5BKX6 768 aa14.85□□□□□ -0.03
CLCNKA-202ENST00000375692 RNASEH2BQ5TBB1 312 aaKnown RBP14.85□□□□□ -0.03
CLCNKA-202ENST00000375692 TDRD10Q5VZ19 366 aaKnown RBP14.85□□□□□ -0.03
CLCNKA-202ENST00000375692 PLEKHA7Q6IQ23 1121 aa14.85□□□□□ -0.03
CLCNKA-202ENST00000375692 C15orf39Q6ZRI6 1047 aa14.85□□□□□ -0.03
CLCNKA-202ENST00000375692 ZNF677Q86XU0 584 aa14.85□□□□□ -0.03
CLCNKA-202ENST00000375692 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.85□□□□□ -0.03
CLCNKA-202ENST00000375692 ABRAQ8N0Z2 381 aa14.85□□□□□ -0.03
CLCNKA-202ENST00000375692 TEX9Q8N6V9 391 aa14.85□□□□□ -0.03
CLCNKA-202ENST00000375692 SPDYE1Q8NFV5 336 aaPredicted RBP14.85□□□□□ -0.03
CLCNKA-202ENST00000375692 FEZF2Q8TBJ5 459 aa14.85□□□□□ -0.03
CLCNKA-202ENST00000375692 DNAJC9Q8WXX5 260 aa14.85□□□□□ -0.03
CLCNKA-202ENST00000375692 APOBEC3GQ9HC16 384 aaKnown RBP14.85□□□□□ -0.03
CLCNKA-202ENST00000375692 ARL8BQ9NVJ2 186 aa14.85□□□□□ -0.03
CLCNKA-202ENST00000375692 SLC17A7Q9P2U7 560 aa14.85□□□□□ -0.03
CLCNKA-202ENST00000375692 PSMC3IPQ9P2W1 217 aaPredicted RBP14.85□□□□□ -0.03
CLCNKA-202ENST00000375692 TCEAL9Q9UHQ7 104 aa14.85□□□□□ -0.03
CLCNKA-202ENST00000375692 TELO2Q9Y4R8 837 aa14.85□□□□□ -0.03
CLCNKA-202ENST00000375692 CLUHO75153 1309 aa14.85□□□□□ -0.03
CLCNKA-202ENST00000375692 SGK1O00141 431 aa14.85□□□□□ -0.03
CLCNKA-202ENST00000375692 C2CD2LO14523 706 aa14.85□□□□□ -0.03
CLCNKA-202ENST00000375692 TRAFD1O14545 582 aaPredicted RBP14.85□□□□□ -0.03
CLCNKA-202ENST00000375692 PEX10O60683 326 aa14.85□□□□□ -0.03
CLCNKA-202ENST00000375692 LMNB2Q03252 620 aa14.85□□□□□ -0.03
CLCNKA-202ENST00000375692 TTLL12Q14166 644 aaPredicted RBP14.85□□□□□ -0.03
CLCNKA-202ENST00000375692 FAM182AQ5T1J6 154 aa14.85□□□□□ -0.03
CLCNKA-202ENST00000375692 TCP10LQ8TDR4 215 aa14.85□□□□□ -0.03
CLCNKA-202ENST00000375692 PTPRN2Q92932 1015 aa14.85□□□□□ -0.03
CLCNKA-202ENST00000375692 ZBTB10Q96DT7 871 aa14.85□□□□□ -0.03
CLCNKA-202ENST00000375692 ANKRD27Q96NW4 1050 aa14.85□□□□□ -0.03
CLCNKA-202ENST00000375692 RABGEF1Q9UJ41 708 aa14.85□□□□□ -0.03
CLCNKA-202ENST00000375692 AFG3L2Q9Y4W6 797 aa14.85□□□□□ -0.03
CLCNKA-202ENST00000375692 E7ENQ6 273 aa14.84□□□□□ -0.03
CLCNKA-202ENST00000375692 WDR46O15213 610 aaKnown RBP14.84□□□□□ -0.03
CLCNKA-202ENST00000375692 TJP3O95049 919 aa14.84□□□□□ -0.03
CLCNKA-202ENST00000375692 VNN1O95497 513 aa14.84□□□□□ -0.03
CLCNKA-202ENST00000375692 BPIFB4P59827 614 aa14.84□□□□□ -0.03
CLCNKA-202ENST00000375692 ZNF252P-AS1Q0IIN9 211 aa14.84□□□□□ -0.03
CLCNKA-202ENST00000375692 MORF4L2Q15014 288 aa14.84□□□□□ -0.03
CLCNKA-202ENST00000375692 FNBP1LQ5T0N5 605 aa14.84□□□□□ -0.03
CLCNKA-202ENST00000375692 ANKRD22Q5VYY1 191 aa14.84□□□□□ -0.03
CLCNKA-202ENST00000375692 C4orf50Q6ZRC1 276 aa14.84□□□□□ -0.03
CLCNKA-202ENST00000375692 CENPUQ71F23 418 aa14.84□□□□□ -0.03
CLCNKA-202ENST00000375692 TAS1R3Q7RTX0 852 aa14.84□□□□□ -0.03
CLCNKA-202ENST00000375692 USP37Q86T82 979 aa14.84□□□□□ -0.03
CLCNKA-202ENST00000375692 LRRC6Q86X45 466 aa14.84□□□□□ -0.03
CLCNKA-202ENST00000375692 RCOR2Q8IZ40 523 aa14.84□□□□□ -0.03
CLCNKA-202ENST00000375692 ZNF276Q8N554 614 aa14.84□□□□□ -0.03
CLCNKA-202ENST00000375692 LPAR1Q92633 364 aa14.84□□□□□ -0.03
CLCNKA-202ENST00000375692 CEP170P1Q96L14 293 aa14.84□□□□□ -0.03
CLCNKA-202ENST00000375692 ELP3Q9H9T3 547 aa14.84□□□□□ -0.03
CLCNKA-202ENST00000375692 RAVER2Q9HCJ3 691 aaKnown RBP14.84□□□□□ -0.03
CLCNKA-202ENST00000375692 METTL5Q9NRN9 209 aaKnown RBP14.84□□□□□ -0.03
CLCNKA-202ENST00000375692 SENP1Q9P0U3 644 aa14.84□□□□□ -0.03
CLCNKA-202ENST00000375692 HEY2Q9UBP5 337 aa14.84□□□□□ -0.03
CLCNKA-202ENST00000375692 C2orf71A6NGG8 1288 aa14.84□□□□□ -0.03
CLCNKA-202ENST00000375692 GLRA2P23416 452 aa14.84□□□□□ -0.03
CLCNKA-202ENST00000375692 CETN2P41208 172 aa14.84□□□□□ -0.03
CLCNKA-202ENST00000375692 NLRP11P59045 1033 aaKnown RBP14.84□□□□□ -0.03
CLCNKA-202ENST00000375692 DYNLT1P63172 113 aa14.84□□□□□ -0.03
CLCNKA-202ENST00000375692 SEPT7Q16181 437 aaKnown RBP14.84□□□□□ -0.03
CLCNKA-202ENST00000375692 MUM1Q2TAK8 710 aa14.84□□□□□ -0.03
CLCNKA-202ENST00000375692 FYB2Q5VWT5 728 aa14.84□□□□□ -0.03
CLCNKA-202ENST00000375692 SPOCD1Q6ZMY3 1216 aa14.84□□□□□ -0.03
CLCNKA-202ENST00000375692 CEP128Q6ZU80 1094 aa14.84□□□□□ -0.03
CLCNKA-202ENST00000375692 FAM160B2Q86V87 743 aa14.84□□□□□ -0.03
CLCNKA-202ENST00000375692 LMNTD2Q8IXW0 634 aa14.84□□□□□ -0.03
CLCNKA-202ENST00000375692 SYTL5Q8TDW5 730 aaPredicted RBP14.84□□□□□ -0.03
CLCNKA-202ENST00000375692 ZNF526Q8TF50 670 aaPredicted RBP14.84□□□□□ -0.03
CLCNKA-202ENST00000375692 SENP7Q9BQF6 1050 aa14.84□□□□□ -0.03
CLCNKA-202ENST00000375692 ZNF408Q9H9D4 720 aa14.84□□□□□ -0.03
CLCNKA-202ENST00000375692 RRAGCQ9HB90 399 aa14.84□□□□□ -0.03
CLCNKA-202ENST00000375692 TBC1D22BQ9NU19 505 aa14.84□□□□□ -0.03
CLCNKA-202ENST00000375692 ICAM1P05362 532 aa14.83□□□□□ -0.03
CLCNKA-202ENST00000375692 GEMIN4P57678 1058 aaKnown RBP14.83□□□□□ -0.03
CLCNKA-202ENST00000375692 OGDHQ02218 1023 aa14.83□□□□□ -0.03
CLCNKA-202ENST00000375692 ZACNQ401N2 412 aa14.83□□□□□ -0.03
CLCNKA-202ENST00000375692 UCMAQ8WVF2 138 aa14.83□□□□□ -0.03
CLCNKA-202ENST00000375692 ATG4CQ96DT6 458 aa14.83□□□□□ -0.03
CLCNKA-202ENST00000375692 FNBP1Q96RU3 617 aa14.83□□□□□ -0.03
CLCNKA-202ENST00000375692 TIPINQ9BVW5 301 aa14.83□□□□□ -0.03
CLCNKA-202ENST00000375692 TLE6Q9H808 572 aa14.83□□□□□ -0.03
CLCNKA-202ENST00000375692 DCLRE1BQ9H816 532 aa14.83□□□□□ -0.03
CLCNKA-202ENST00000375692 FBXO6Q9NRD1 293 aaPredicted RBP14.83□□□□□ -0.03
CLCNKA-202ENST00000375692 SPATS2LQ9NUQ6 558 aaKnown RBP14.83□□□□□ -0.03
CLCNKA-202ENST00000375692 NMRK1Q9NWW6 199 aa14.83□□□□□ -0.03
CLCNKA-202ENST00000375692 ANKFY1Q9P2R3 1169 aa14.83□□□□□ -0.03
CLCNKA-202ENST00000375692 SLC24A2Q9UI40 661 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms