RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 GLI1P08151 1106 aa15.08■□□□□ 0
C9orf3-202ENST00000297979 TAF6P49848 677 aa15.08■□□□□ 0
C9orf3-202ENST00000297979 PPP2R5EQ16537 467 aa15.08■□□□□ 0
C9orf3-202ENST00000297979 PPP1R15BQ5SWA1 713 aa15.08■□□□□ 0
C9orf3-202ENST00000297979 DCUN1D2Q6PH85 259 aa15.08■□□□□ 0
C9orf3-202ENST00000297979 DPH6Q7L8W6 267 aa15.08■□□□□ 0
C9orf3-202ENST00000297979 IFT20Q8IY31 132 aa15.08■□□□□ 0
C9orf3-202ENST00000297979 SLAIN1Q8ND83 568 aa15.08■□□□□ 0
C9orf3-202ENST00000297979 GOLGA2P5Q9HBQ8 144 aa15.08■□□□□ 0
C9orf3-202ENST00000297979 TRMT13Q9NUP7 481 aaKnown RBP15.08■□□□□ 0
C9orf3-202ENST00000297979 GDAP2Q9NXN4 497 aa15.08■□□□□ 0
C9orf3-202ENST00000297979 CENPFP49454 3210 aa15.08■□□□□ 0
C9orf3-202ENST00000297979 PSTPIP1O43586 416 aa15.07■□□□□ 0
C9orf3-202ENST00000297979 FKTNO75072 461 aa15.07■□□□□ 0
C9orf3-202ENST00000297979 SASH3O75995 380 aa15.07■□□□□ 0
C9orf3-202ENST00000297979 MYBL2P10244 700 aa15.07■□□□□ 0
C9orf3-202ENST00000297979 GSCP56915 257 aaPredicted RBP15.07■□□□□ 0
C9orf3-202ENST00000297979 ARHGEF6Q15052 776 aa15.07■□□□□ 0
C9orf3-202ENST00000297979 SOWAHAQ2M3V2 549 aa15.07■□□□□ 0
C9orf3-202ENST00000297979 SV2CQ496J9 727 aa15.07■□□□□ 0
C9orf3-202ENST00000297979 LCLAT1Q6UWP7 414 aa15.07■□□□□ 0
C9orf3-202ENST00000297979 HDXQ7Z353 690 aa15.07■□□□□ 0
C9orf3-202ENST00000297979 ADAT2Q7Z6V5 191 aaKnown RBP15.07■□□□□ 0
C9orf3-202ENST00000297979 UNC93AQ86WB7 457 aa15.07■□□□□ 0
C9orf3-202ENST00000297979 GSPT2Q8IYD1 628 aaKnown RBP15.07■□□□□ 0
C9orf3-202ENST00000297979 C18orf8Q96DM3 657 aa15.07■□□□□ 0
C9orf3-202ENST00000297979 ZFP42Q96MM3 310 aa15.07■□□□□ 0
C9orf3-202ENST00000297979 GLT1D1Q96MS3 346 aa15.07■□□□□ 0
C9orf3-202ENST00000297979 PPP1R10Q96QC0 940 aaKnown RBP15.07■□□□□ 0
C9orf3-202ENST00000297979 CPXM1Q96SM3 734 aa15.07■□□□□ 0
C9orf3-202ENST00000297979 SYNCQ9H7C4 482 aa15.07■□□□□ 0
C9orf3-202ENST00000297979 GDF3Q9NR23 364 aa15.07■□□□□ 0
C9orf3-202ENST00000297979 OGFRQ9NZT2 677 aa15.07■□□□□ 0
C9orf3-202ENST00000297979 WDR35Q9P2L0 1181 aa15.07■□□□□ 0
C9orf3-202ENST00000297979 GHRP10912 638 aa15.07■□□□□ 0
C9orf3-202ENST00000297979 LRPAP1P30533 357 aa15.07■□□□□ 0
C9orf3-202ENST00000297979 GPD2P43304 727 aa15.07■□□□□ 0
C9orf3-202ENST00000297979 GUCY2DQ02846 1103 aa15.07■□□□□ 0
C9orf3-202ENST00000297979 PAK2Q13177 524 aa15.07■□□□□ 0
C9orf3-202ENST00000297979 PDCLQ13371 301 aa15.07■□□□□ 0
C9orf3-202ENST00000297979 RHOT1Q8IXI2 618 aa15.07■□□□□ 0
C9orf3-202ENST00000297979 OR6B3Q8NGW1 331 aa15.07■□□□□ 0
C9orf3-202ENST00000297979 CCDC26Q8TAB7 109 aa15.07■□□□□ 0
C9orf3-202ENST00000297979 TSPAN16Q9UKR8 245 aa15.07■□□□□ 0
C9orf3-202ENST00000297979 PADI3Q9ULW8 664 aa15.07■□□□□ 0
C9orf3-202ENST00000297979 NR2E1Q9Y466 385 aa15.07■□□□□ 0
C9orf3-202ENST00000297979 SPTLC1O15269 473 aa15.07■□□□□ 0
C9orf3-202ENST00000297979 CD52P31358 61 aa15.07■□□□□ 0
C9orf3-202ENST00000297979 TRIM71Q2Q1W2 868 aaKnown RBP15.07■□□□□ 0
C9orf3-202ENST00000297979 ACOT1Q86TX2 421 aa15.07■□□□□ 0
C9orf3-202ENST00000297979 TSEN34Q9BSV6 310 aaKnown RBP15.07■□□□□ 0
C9orf3-202ENST00000297979 EPB41L5Q9HCM4 733 aa15.07■□□□□ 0
C9orf3-202ENST00000297979 HMX1Q9NP08 348 aaPredicted RBP15.07■□□□□ 0
C9orf3-202ENST00000297979 SLC38A7Q9NVC3 462 aa15.07■□□□□ 0
C9orf3-202ENST00000297979 FAM53CQ9NYF3 392 aa15.07■□□□□ 0
C9orf3-202ENST00000297979 TJP2Q9UDY2 1190 aa15.07■□□□□ 0
C9orf3-202ENST00000297979 FRMPD3Q5JV73 1810 aa15.06■□□□□ 0
C9orf3-202ENST00000297979 MEIS3P2A8K0S8 358 aa15.06■□□□□ 0
C9orf3-202ENST00000297979 ERBB2P04626 1255 aa15.06■□□□□ 0
C9orf3-202ENST00000297979 MLH1P40692 756 aa15.06■□□□□ 0
C9orf3-202ENST00000297979 PSMC1P62191 440 aaKnown RBP15.06■□□□□ 0
C9orf3-202ENST00000297979 ZNF252P-AS1Q0IIN9 211 aa15.06■□□□□ 0
C9orf3-202ENST00000297979 GOLGA7BQ2TAP0 167 aa15.06■□□□□ 0
C9orf3-202ENST00000297979 DAB2IPQ5VWQ8 1189 aa15.06■□□□□ 0
C9orf3-202ENST00000297979 GET4Q7L5D6 327 aaPredicted RBP15.06■□□□□ 0
C9orf3-202ENST00000297979 SLC13A5Q86YT5 568 aaPredicted RBP15.06■□□□□ 0
C9orf3-202ENST00000297979 C12orf29Q8N999 325 aa15.06■□□□□ 0
C9orf3-202ENST00000297979 UBA3Q8TBC4 463 aa15.06■□□□□ 0
C9orf3-202ENST00000297979 DDX27Q96GQ7 796 aaKnown RBP15.06■□□□□ 0
C9orf3-202ENST00000297979 OSBPL7Q9BZF2 842 aa15.06■□□□□ 0
C9orf3-202ENST00000297979 PLEKHA4Q9H4M7 779 aa15.06■□□□□ 0
C9orf3-202ENST00000297979 USTQ9Y2C2 406 aa15.06■□□□□ 0
C9orf3-202ENST00000297979 NME7Q9Y5B8 376 aa15.06■□□□□ 0
C9orf3-202ENST00000297979 SPDYE4A6NLX3 237 aa15.06■□□□□ 0
C9orf3-202ENST00000297979 GOLGA8SH3BPF8 625 aa15.06■□□□□ 0
C9orf3-202ENST00000297979 MAP2K7O14733 419 aa15.06■□□□□ 0
C9orf3-202ENST00000297979 GABRB2P47870 512 aa15.06■□□□□ 0
C9orf3-202ENST00000297979 PRMT2P55345 433 aa15.06■□□□□ 0
C9orf3-202ENST00000297979 ZNF268Q14587 947 aaPredicted RBP15.06■□□□□ 0
C9orf3-202ENST00000297979 LPIN1Q14693 890 aa15.06■□□□□ 0
C9orf3-202ENST00000297979 FAM26DQ5JW98 314 aa15.06■□□□□ 0
C9orf3-202ENST00000297979 MAATS1Q7Z4T9 603 aa15.06■□□□□ 0
C9orf3-202ENST00000297979 XYLT1Q86Y38 959 aa15.06■□□□□ 0
C9orf3-202ENST00000297979 AENQ8WTP8 325 aaKnown RBP15.06■□□□□ 0
C9orf3-202ENST00000297979 ZNF296Q8WUU4 475 aaPredicted RBP15.06■□□□□ 0
C9orf3-202ENST00000297979 KBTBD7Q8WVZ9 684 aa15.06■□□□□ 0
C9orf3-202ENST00000297979 AMACRQ9UHK6 382 aa15.06■□□□□ 0
C9orf3-202ENST00000297979 ZSCAN5CA6NGD5 496 aaPredicted RBP15.05■□□□□ 0
C9orf3-202ENST00000297979 SIGLEC16A6NMB1 481 aa15.05■□□□□ 0
C9orf3-202ENST00000297979 A8MXQ7 604 aa15.05■□□□□ 0
C9orf3-202ENST00000297979 RAB27AP51159 221 aa15.05■□□□□ 0
C9orf3-202ENST00000297979 TAS2R40P59535 323 aa15.05■□□□□ 0
C9orf3-202ENST00000297979 OGDHQ02218 1023 aa15.05■□□□□ 0
C9orf3-202ENST00000297979 PIGHQ14442 188 aaPredicted RBP15.05■□□□□ 0
C9orf3-202ENST00000297979 LHX8Q68G74 356 aa15.05■□□□□ 0
C9orf3-202ENST00000297979 SDR16C5Q8N3Y7 309 aa15.05■□□□□ 0
C9orf3-202ENST00000297979 APPL2Q8NEU8 664 aa15.05■□□□□ 0
C9orf3-202ENST00000297979 GAD1Q99259 594 aa15.05■□□□□ 0
C9orf3-202ENST00000297979 MTUS1Q9ULD2 1270 aa15.05■□□□□ 0
C9orf3-202ENST00000297979 GIT1Q9Y2X7 761 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms