RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 CXCL8P10145 99 aa7.85□□□□□ -1.15
SMAD4-210ENST00000590061 UCHL3P15374 230 aa7.85□□□□□ -1.15
SMAD4-210ENST00000590061 CD33P20138 364 aa7.85□□□□□ -1.15
SMAD4-210ENST00000590061 HNRNPH3P31942 346 aaKnown RBP7.85□□□□□ -1.15
SMAD4-210ENST00000590061 KRT9P35527 623 aa7.85□□□□□ -1.15
SMAD4-210ENST00000590061 KCNJ6P48051 423 aa7.85□□□□□ -1.15
SMAD4-210ENST00000590061 GCLMP48507 274 aa7.85□□□□□ -1.15
SMAD4-210ENST00000590061 PSMA6P60900 246 aaKnown RBP7.85□□□□□ -1.15
SMAD4-210ENST00000590061 SNRPNP63162 240 aaKnown RBP7.85□□□□□ -1.15
SMAD4-210ENST00000590061 TNNC1P63316 161 aa7.85□□□□□ -1.15
SMAD4-210ENST00000590061 ELAVL2Q12926 359 aaKnown RBP7.85□□□□□ -1.15
SMAD4-210ENST00000590061 GRIK3Q13003 919 aa7.85□□□□□ -1.15
SMAD4-210ENST00000590061 TBX2Q13207 712 aaPredicted RBP7.85□□□□□ -1.15
SMAD4-210ENST00000590061 STILQ15468 1287 aa7.85□□□□□ -1.15
SMAD4-210ENST00000590061 SLC10A6Q3KNW5 377 aa7.85□□□□□ -1.15
SMAD4-210ENST00000590061 SV2CQ496J9 727 aa7.85□□□□□ -1.15
SMAD4-210ENST00000590061 ZNF667Q5HYK9 610 aa7.85□□□□□ -1.15
SMAD4-210ENST00000590061 C10orf76Q5T2E6 689 aa7.85□□□□□ -1.15
SMAD4-210ENST00000590061 SFMBT2Q5VUG0 894 aa7.85□□□□□ -1.15
SMAD4-210ENST00000590061 EEF1DP3Q658K8 133 aa7.85□□□□□ -1.15
SMAD4-210ENST00000590061 PSRC1Q6PGN9 363 aaPredicted RBP7.85□□□□□ -1.15
SMAD4-210ENST00000590061 TRIM65Q6PJ69 517 aa7.85□□□□□ -1.15
SMAD4-210ENST00000590061 ALKAL1Q6UXT8 129 aa7.85□□□□□ -1.15
SMAD4-210ENST00000590061 CYP26C1Q6V0L0 522 aa7.85□□□□□ -1.15
SMAD4-210ENST00000590061 C15orf39Q6ZRI6 1047 aa7.85□□□□□ -1.15
SMAD4-210ENST00000590061 TRAPPC11Q7Z392 1133 aa7.85□□□□□ -1.15
SMAD4-210ENST00000590061 ZNF677Q86XU0 584 aa7.85□□□□□ -1.15
SMAD4-210ENST00000590061 ECHDC2Q86YB7 292 aa7.85□□□□□ -1.15
SMAD4-210ENST00000590061 NPAS4Q8IUM7 802 aa7.85□□□□□ -1.15
SMAD4-210ENST00000590061 TSEN2Q8NCE0 465 aaKnown RBP7.85□□□□□ -1.15
SMAD4-210ENST00000590061 TMEM40Q8WWA1 233 aa7.85□□□□□ -1.15
SMAD4-210ENST00000590061 ZBTB10Q96DT7 871 aa7.85□□□□□ -1.15
SMAD4-210ENST00000590061 PPP1R16BQ96T49 567 aa7.85□□□□□ -1.15
SMAD4-210ENST00000590061 PLCD4Q9BRC7 762 aa7.85□□□□□ -1.15
SMAD4-210ENST00000590061 LSM14BQ9BX40 385 aaKnown RBP7.85□□□□□ -1.15
SMAD4-210ENST00000590061 PPP1R12CQ9BZL4 782 aa7.85□□□□□ -1.15
SMAD4-210ENST00000590061 MIS12Q9H081 205 aa7.85□□□□□ -1.15
SMAD4-210ENST00000590061 RSAD1Q9HA92 442 aa7.85□□□□□ -1.15
SMAD4-210ENST00000590061 FAM207AQ9NSI2 230 aaPredicted RBP7.85□□□□□ -1.15
SMAD4-210ENST00000590061 DPP3Q9NY33 737 aa7.85□□□□□ -1.15
SMAD4-210ENST00000590061 PLAGL2Q9UPG8 496 aa7.85□□□□□ -1.15
SMAD4-210ENST00000590061 SIK3Q9Y2K2 1263 aa7.85□□□□□ -1.15
SMAD4-210ENST00000590061 SMIM28A0A1B0GU29 152 aa7.84□□□□□ -1.15
SMAD4-210ENST00000590061 SERTM1A2A2V5 107 aa7.84□□□□□ -1.15
SMAD4-210ENST00000590061 C9IYK1 514 aa7.84□□□□□ -1.15
SMAD4-210ENST00000590061 ARHGAP6O43182 974 aa7.84□□□□□ -1.15
SMAD4-210ENST00000590061 TEX33O43247 280 aa7.84□□□□□ -1.15
SMAD4-210ENST00000590061 ZSCAN12O43309 604 aa7.84□□□□□ -1.15
SMAD4-210ENST00000590061 CSDE1O75534 798 aaKnown RBP7.84□□□□□ -1.15
SMAD4-210ENST00000590061 ASS1P00966 412 aaKnown RBP7.84□□□□□ -1.15
SMAD4-210ENST00000590061 HLA-DRAP01903 254 aa7.84□□□□□ -1.15
SMAD4-210ENST00000590061 SERPING1P05155 500 aa7.84□□□□□ -1.15
SMAD4-210ENST00000590061 TRIM49P0CI25 452 aa7.84□□□□□ -1.15
SMAD4-210ENST00000590061 TRIM49CP0CI26 452 aa7.84□□□□□ -1.15
SMAD4-210ENST00000590061 EPXP11678 715 aa7.84□□□□□ -1.15
SMAD4-210ENST00000590061 MSNP26038 577 aaKnown RBP7.84□□□□□ -1.15
SMAD4-210ENST00000590061 LRPAP1P30533 357 aa7.84□□□□□ -1.15
SMAD4-210ENST00000590061 CYLC1P35663 651 aaPredicted RBP7.84□□□□□ -1.15
SMAD4-210ENST00000590061 OSTNP61366 133 aa7.84□□□□□ -1.15
SMAD4-210ENST00000590061 KRT83P78385 493 aa7.84□□□□□ -1.15
SMAD4-210ENST00000590061 RNASELQ05823 741 aaKnown RBP7.84□□□□□ -1.15
SMAD4-210ENST00000590061 PPP3CAQ08209 521 aa7.84□□□□□ -1.15
SMAD4-210ENST00000590061 BMS1Q14692 1282 aaKnown RBP7.84□□□□□ -1.15
SMAD4-210ENST00000590061 SPA17Q15506 151 aa7.84□□□□□ -1.15
SMAD4-210ENST00000590061 ZBTB6Q15916 424 aa7.84□□□□□ -1.15
SMAD4-210ENST00000590061 ZNF699Q32M78 642 aa7.84□□□□□ -1.15
SMAD4-210ENST00000590061 EPC2Q52LR7 807 aa7.84□□□□□ -1.15
SMAD4-210ENST00000590061 UBXN11Q5T124 520 aa7.84□□□□□ -1.15
SMAD4-210ENST00000590061 PDXDC1Q6P996 788 aa7.84□□□□□ -1.15
SMAD4-210ENST00000590061 UBE2Q1Q7Z7E8 422 aa7.84□□□□□ -1.15
SMAD4-210ENST00000590061 TMEM86AQ8N2M4 240 aa7.84□□□□□ -1.15
SMAD4-210ENST00000590061 GALNT6Q8NCL4 622 aa7.84□□□□□ -1.15
SMAD4-210ENST00000590061 PHOSPHO2Q8TCD6 241 aa7.84□□□□□ -1.15
SMAD4-210ENST00000590061 EDARADDQ8WWZ3 215 aa7.84□□□□□ -1.15
SMAD4-210ENST00000590061 ZNF668Q96K58 619 aaPredicted RBP7.84□□□□□ -1.15
SMAD4-210ENST00000590061 CCDC42Q96M95 316 aa7.84□□□□□ -1.15
SMAD4-210ENST00000590061 DNAJC7Q99615 494 aa7.84□□□□□ -1.15
SMAD4-210ENST00000590061 BAG1Q99933 345 aaPredicted RBP7.84□□□□□ -1.15
SMAD4-210ENST00000590061 NIF3L1Q9GZT8 377 aa7.84□□□□□ -1.15
SMAD4-210ENST00000590061 DEF6Q9H4E7 631 aa7.84□□□□□ -1.15
SMAD4-210ENST00000590061 AGO3Q9H9G7 860 aaKnown RBP7.84□□□□□ -1.15
SMAD4-210ENST00000590061 SNTG2Q9NY99 539 aa7.84□□□□□ -1.15
SMAD4-210ENST00000590061 AIPL1Q9NZN9 384 aa7.84□□□□□ -1.15
SMAD4-210ENST00000590061 CEP83Q9Y592 693 aa7.84□□□□□ -1.15
SMAD4-210ENST00000590061 SSU72P8A0A1W2PR75 194 aa7.83□□□□□ -1.16
SMAD4-210ENST00000590061 ARL5CA6NH57 179 aa7.83□□□□□ -1.16
SMAD4-210ENST00000590061 TISP43B9A030 160 aa7.83□□□□□ -1.16
SMAD4-210ENST00000590061 ENPP3O14638 875 aa7.83□□□□□ -1.16
SMAD4-210ENST00000590061 KHNYNO15037 678 aaKnown RBP7.83□□□□□ -1.16
SMAD4-210ENST00000590061 MED7O43513 233 aa7.83□□□□□ -1.16
SMAD4-210ENST00000590061 HUS1O60921 280 aa7.83□□□□□ -1.16
SMAD4-210ENST00000590061 MFAP3LO75121 409 aa7.83□□□□□ -1.16
SMAD4-210ENST00000590061 ITGB2P05107 769 aa7.83□□□□□ -1.16
SMAD4-210ENST00000590061 KRT19P08727 400 aa7.83□□□□□ -1.16
SMAD4-210ENST00000590061 FGFR4P22455 802 aa7.83□□□□□ -1.16
SMAD4-210ENST00000590061 DEKP35659 375 aaKnown RBP7.83□□□□□ -1.16
SMAD4-210ENST00000590061 SOX5P35711 763 aa7.83□□□□□ -1.16
SMAD4-210ENST00000590061 TAF6P49848 677 aa7.83□□□□□ -1.16
SMAD4-210ENST00000590061 SLC8A3P57103 927 aa7.83□□□□□ -1.16
SMAD4-210ENST00000590061 POLR2FP61218 127 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms