RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 TPCN1Q9ULQ1 816 aa4.03□□□□□ -1.76
SHCBP1-202ENST00000563219 FPGT-TNNI3KV9GXZ4 949 aa4.03□□□□□ -1.76
SHCBP1-202ENST00000563219 MGEA5O60502 916 aa4.02□□□□□ -1.77
SHCBP1-202ENST00000563219 DNAJB5O75953 348 aa4.02□□□□□ -1.77
SHCBP1-202ENST00000563219 NCR1O76036 304 aa4.02□□□□□ -1.77
SHCBP1-202ENST00000563219 THP07101 528 aa4.02□□□□□ -1.77
SHCBP1-202ENST00000563219 ELANEP08246 267 aa4.02□□□□□ -1.77
SHCBP1-202ENST00000563219 KITP10721 976 aa4.02□□□□□ -1.77
SHCBP1-202ENST00000563219 RPL17P18621 184 aaKnown RBP4.02□□□□□ -1.77
SHCBP1-202ENST00000563219 FBLP22087 321 aaKnown RBP4.02□□□□□ -1.77
SHCBP1-202ENST00000563219 PEX2P28328 305 aa4.02□□□□□ -1.77
SHCBP1-202ENST00000563219 PHKA1P46020 1223 aa4.02□□□□□ -1.77
SHCBP1-202ENST00000563219 ZNF135P52742 658 aaPredicted RBP4.02□□□□□ -1.77
SHCBP1-202ENST00000563219 PSMC1P62191 440 aaKnown RBP4.02□□□□□ -1.77
SHCBP1-202ENST00000563219 BEAN1Q3B7T3 259 aa4.02□□□□□ -1.77
SHCBP1-202ENST00000563219 PPP1R32Q7Z5V6 425 aa4.02□□□□□ -1.77
SHCBP1-202ENST00000563219 MAPKAPK5Q8IW41 473 aa4.02□□□□□ -1.77
SHCBP1-202ENST00000563219 SMC5Q8IY18 1101 aa4.02□□□□□ -1.77
SHCBP1-202ENST00000563219 CFAP52Q8N1V2 620 aa4.02□□□□□ -1.77
SHCBP1-202ENST00000563219 Q8NA96 180 aa4.02□□□□□ -1.77
SHCBP1-202ENST00000563219 SLC17A8Q8NDX2 589 aa4.02□□□□□ -1.77
SHCBP1-202ENST00000563219 SVIPQ8NHG7 77 aa4.02□□□□□ -1.77
SHCBP1-202ENST00000563219 APIPQ96GX9 242 aa4.02□□□□□ -1.77
SHCBP1-202ENST00000563219 SUCLG2Q96I99 432 aa4.02□□□□□ -1.77
SHCBP1-202ENST00000563219 WDR11Q9BZH6 1224 aa4.02□□□□□ -1.77
SHCBP1-202ENST00000563219 IMPG2Q9BZV3 1241 aa4.02□□□□□ -1.77
SHCBP1-202ENST00000563219 LRRC27Q9C0I9 530 aa4.02□□□□□ -1.77
SHCBP1-202ENST00000563219 TINAGL1Q9GZM7 467 aaPredicted RBP4.02□□□□□ -1.77
SHCBP1-202ENST00000563219 BTBD1Q9H0C5 482 aa4.02□□□□□ -1.77
SHCBP1-202ENST00000563219 NUP62CLQ9H1M0 184 aa4.02□□□□□ -1.77
SHCBP1-202ENST00000563219 SYNPO2LQ9H987 977 aa4.02□□□□□ -1.77
SHCBP1-202ENST00000563219 VSX1Q9NZR4 365 aaPredicted RBP4.02□□□□□ -1.77
SHCBP1-202ENST00000563219 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.02□□□□□ -1.77
SHCBP1-202ENST00000563219 ANKFY1Q9P2R3 1169 aa4.02□□□□□ -1.77
SHCBP1-202ENST00000563219 TAGLN3Q9UI15 199 aa4.02□□□□□ -1.77
SHCBP1-202ENST00000563219 KCNE5Q9UJ90 142 aa4.02□□□□□ -1.77
SHCBP1-202ENST00000563219 AGAP1Q9UPQ3 857 aa4.02□□□□□ -1.77
SHCBP1-202ENST00000563219 PLEKHM1Q9Y4G2 1056 aa4.02□□□□□ -1.77
SHCBP1-202ENST00000563219 USP19O94966 1318 aa4.01□□□□□ -1.77
SHCBP1-202ENST00000563219 CCDC195A0A1B0GUA6 201 aa4.01□□□□□ -1.77
SHCBP1-202ENST00000563219 ZAR1LA6NP61 321 aa4.01□□□□□ -1.77
SHCBP1-202ENST00000563219 TBX3O15119 743 aa4.01□□□□□ -1.77
SHCBP1-202ENST00000563219 NDUFA10O95299 355 aa4.01□□□□□ -1.77
SHCBP1-202ENST00000563219 GPANK1O95872 356 aa4.01□□□□□ -1.77
SHCBP1-202ENST00000563219 SLC5A1P13866 664 aa4.01□□□□□ -1.77
SHCBP1-202ENST00000563219 FDXRP22570 491 aa4.01□□□□□ -1.77
SHCBP1-202ENST00000563219 SERPINB3P29508 390 aa4.01□□□□□ -1.77
SHCBP1-202ENST00000563219 HSD11B2P80365 405 aa4.01□□□□□ -1.77
SHCBP1-202ENST00000563219 PIGFQ07326 219 aa4.01□□□□□ -1.77
SHCBP1-202ENST00000563219 ZNF844Q08AG5 666 aa4.01□□□□□ -1.77
SHCBP1-202ENST00000563219 LONRF1Q17RB8 773 aa4.01□□□□□ -1.77
SHCBP1-202ENST00000563219 FAM160B1Q5W0V3 765 aa4.01□□□□□ -1.77
SHCBP1-202ENST00000563219 B3GNTL1Q67FW5 361 aaPredicted RBP4.01□□□□□ -1.77
SHCBP1-202ENST00000563219 Q6YL49 198 aa4.01□□□□□ -1.77
SHCBP1-202ENST00000563219 TSHZ1Q6ZSZ6 1077 aa4.01□□□□□ -1.77
SHCBP1-202ENST00000563219 TMPRSS9Q7Z410 1059 aa4.01□□□□□ -1.77
SHCBP1-202ENST00000563219 C11orf96Q7Z7L8 435 aa4.01□□□□□ -1.77
SHCBP1-202ENST00000563219 USP37Q86T82 979 aa4.01□□□□□ -1.77
SHCBP1-202ENST00000563219 PRIMA1Q86XR5 153 aa4.01□□□□□ -1.77
SHCBP1-202ENST00000563219 TMEM132CQ8N3T6 1108 aa4.01□□□□□ -1.77
SHCBP1-202ENST00000563219 SAMD3Q8N6K7 520 aa4.01□□□□□ -1.77
SHCBP1-202ENST00000563219 FUBP1Q96AE4 644 aaKnown RBP4.01□□□□□ -1.77
SHCBP1-202ENST00000563219 VOPP1Q96AW1 172 aa4.01□□□□□ -1.77
SHCBP1-202ENST00000563219 BOD1Q96IK1 185 aa4.01□□□□□ -1.77
SHCBP1-202ENST00000563219 P2RX7Q99572 595 aaKnown RBP4.01□□□□□ -1.77
SHCBP1-202ENST00000563219 ZSWIM1Q9BR11 485 aa4.01□□□□□ -1.77
SHCBP1-202ENST00000563219 CNPPD1Q9BV87 410 aa4.01□□□□□ -1.77
SHCBP1-202ENST00000563219 PPCSQ9HAB8 311 aa4.01□□□□□ -1.77
SHCBP1-202ENST00000563219 TMEM74BQ9NUR3 256 aa4.01□□□□□ -1.77
SHCBP1-202ENST00000563219 SYBUQ9NX95 663 aa4.01□□□□□ -1.77
SHCBP1-202ENST00000563219 ETAA1Q9NY74 926 aa4.01□□□□□ -1.77
SHCBP1-202ENST00000563219 CTTNBP2NLQ9P2B4 639 aa4.01□□□□□ -1.77
SHCBP1-202ENST00000563219 CDYLQ9Y232 598 aa4.01□□□□□ -1.77
SHCBP1-202ENST00000563219 NEU2Q9Y3R4 380 aa4.01□□□□□ -1.77
SHCBP1-202ENST00000563219 PAXBP1Q9Y5B6 917 aa4.01□□□□□ -1.77
SHCBP1-202ENST00000563219 PCSK5Q92824 1860 aa4.01□□□□□ -1.77
SHCBP1-202ENST00000563219 A0A1W2PS29 197 aa4□□□□□ -1.77
SHCBP1-202ENST00000563219 MYADML2A6NDP7 307 aa4□□□□□ -1.77
SHCBP1-202ENST00000563219 E7ENX8 843 aa4□□□□□ -1.77
SHCBP1-202ENST00000563219 FOXN3O00409 490 aaPredicted RBP4□□□□□ -1.77
SHCBP1-202ENST00000563219 CREB3O43889 395 aa4□□□□□ -1.77
SHCBP1-202ENST00000563219 PQBP1O60828 265 aaKnown RBP4□□□□□ -1.77
SHCBP1-202ENST00000563219 EIF3JO75822 258 aaKnown RBP4□□□□□ -1.77
SHCBP1-202ENST00000563219 HLA-DOAP06340 250 aa4□□□□□ -1.77
SHCBP1-202ENST00000563219 PIM1P11309 404 aaPredicted RBP4□□□□□ -1.77
SHCBP1-202ENST00000563219 KCNA2P16389 499 aa4□□□□□ -1.77
SHCBP1-202ENST00000563219 SLC7A1P30825 629 aa4□□□□□ -1.77
SHCBP1-202ENST00000563219 KCNJ5P48544 419 aa4□□□□□ -1.77
SHCBP1-202ENST00000563219 CXADRP78310 365 aa4□□□□□ -1.77
SHCBP1-202ENST00000563219 MXRA7P84157 204 aa4□□□□□ -1.77
SHCBP1-202ENST00000563219 TAP2Q03519 686 aa4□□□□□ -1.77
SHCBP1-202ENST00000563219 CNGA2Q16280 664 aa4□□□□□ -1.77
SHCBP1-202ENST00000563219 CCDC142Q17RM4 750 aa4□□□□□ -1.77
SHCBP1-202ENST00000563219 TAPT1Q6NXT6 567 aa4□□□□□ -1.77
SHCBP1-202ENST00000563219 FOXR2Q6PJQ5 311 aa4□□□□□ -1.77
SHCBP1-202ENST00000563219 ZNF783Q6ZMS7 281 aa4□□□□□ -1.77
SHCBP1-202ENST00000563219 MORC1Q86VD1 984 aa4□□□□□ -1.77
SHCBP1-202ENST00000563219 LCORLQ8N3X6 602 aa4□□□□□ -1.77
SHCBP1-202ENST00000563219 SUPT20HQ8NEM7 779 aa4□□□□□ -1.77
SHCBP1-202ENST00000563219 OR6B3Q8NGW1 331 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms