RNA–Protein interactions for RNA: ENST00000544382.5

CLPB-213, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, human

TSL 5

Gene CLPB, Length 982 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLPB-213	ENST00000544382	PIEZO1	Q92508	2521 aa		13.55	□□□□□ -0.24
CLPB-213	ENST00000544382	MAPK13	O15264	365 aa		13.55	□□□□□ -0.24
CLPB-213	ENST00000544382	VNN2	O95498	520 aa		13.55	□□□□□ -0.24
CLPB-213	ENST00000544382	MYL4	P12829	197 aa		13.55	□□□□□ -0.24
CLPB-213	ENST00000544382	KRT13	P13646	458 aa		13.55	□□□□□ -0.24
CLPB-213	ENST00000544382	RFX1	P22670	979 aa		13.55	□□□□□ -0.24
CLPB-213	ENST00000544382	NR2F2	P24468	414 aa		13.55	□□□□□ -0.24
CLPB-213	ENST00000544382	PNOC	Q13519	176 aa		13.55	□□□□□ -0.24
CLPB-213	ENST00000544382	SNW1	Q13573	536 aa	Known RBP	13.55	□□□□□ -0.24
CLPB-213	ENST00000544382	MAPRE1	Q15691	268 aa	Known RBP	13.55	□□□□□ -0.24
CLPB-213	ENST00000544382	SLC5A9	Q2M3M2	681 aa		13.55	□□□□□ -0.24
CLPB-213	ENST00000544382	INTS6L	Q5JSJ4	861 aa	Known RBP	13.55	□□□□□ -0.24
CLPB-213	ENST00000544382	PRSS36	Q5K4E3	855 aa		13.55	□□□□□ -0.24
CLPB-213	ENST00000544382	PARD3B	Q8TEW8	1205 aa		13.55	□□□□□ -0.24
CLPB-213	ENST00000544382	RSAD2	Q8WXG1	361 aa		13.55	□□□□□ -0.24
CLPB-213	ENST00000544382	FAM84A	Q96KN4	292 aa		13.55	□□□□□ -0.24
CLPB-213	ENST00000544382	GCNA	Q96QF7	691 aa		13.55	□□□□□ -0.24
CLPB-213	ENST00000544382	TSG101	Q99816	390 aa		13.55	□□□□□ -0.24
CLPB-213	ENST00000544382	GPR88	Q9GZN0	384 aa		13.55	□□□□□ -0.24
CLPB-213	ENST00000544382	KCNH6	Q9H252	994 aa		13.55	□□□□□ -0.24
CLPB-213	ENST00000544382	SNX25	Q9H3E2	840 aa		13.55	□□□□□ -0.24
CLPB-213	ENST00000544382	ABCB6	Q9NP58	842 aa		13.55	□□□□□ -0.24
CLPB-213	ENST00000544382	CHMP5	Q9NZZ3	219 aa		13.55	□□□□□ -0.24
CLPB-213	ENST00000544382	CEP72	Q9P209	647 aa		13.55	□□□□□ -0.24
CLPB-213	ENST00000544382	MAPK8IP1	Q9UQF2	711 aa		13.55	□□□□□ -0.24
CLPB-213	ENST00000544382	ARIH1	Q9Y4X5	557 aa	Predicted RBP	13.55	□□□□□ -0.24
CLPB-213	ENST00000544382	STAU1	O95793	577 aa	Known RBP	13.54	□□□□□ -0.24
CLPB-213	ENST00000544382	FAM163B	P0C2L3	166 aa		13.54	□□□□□ -0.24
CLPB-213	ENST00000544382	P4HA1	P13674	534 aa		13.54	□□□□□ -0.24
CLPB-213	ENST00000544382	CEBPB	P17676	345 aa		13.54	□□□□□ -0.24
CLPB-213	ENST00000544382	EPHA5	P54756	1037 aa		13.54	□□□□□ -0.24
CLPB-213	ENST00000544382	RPL10A	P62906	217 aa	Known RBP	13.54	□□□□□ -0.24
CLPB-213	ENST00000544382	STIM1	Q13586	685 aa		13.54	□□□□□ -0.24
CLPB-213	ENST00000544382	SOWAHA	Q2M3V2	549 aa		13.54	□□□□□ -0.24
CLPB-213	ENST00000544382	EDRF1	Q3B7T1	1238 aa		13.54	□□□□□ -0.24
CLPB-213	ENST00000544382	WDR72	Q3MJ13	1102 aa		13.54	□□□□□ -0.24
CLPB-213	ENST00000544382	ARHGAP15	Q53QZ3	475 aa		13.54	□□□□□ -0.24
CLPB-213	ENST00000544382	PARM1	Q6UWI2	310 aa		13.54	□□□□□ -0.24
CLPB-213	ENST00000544382	C4orf50	Q6ZRC1	276 aa		13.54	□□□□□ -0.24
CLPB-213	ENST00000544382	INTS8	Q75QN2	995 aa	Known RBP	13.54	□□□□□ -0.24
CLPB-213	ENST00000544382	SPATA2L	Q8IUW3	424 aa	Predicted RBP	13.54	□□□□□ -0.24
CLPB-213	ENST00000544382	ELOA2	Q8IYF1	753 aa	Predicted RBP	13.54	□□□□□ -0.24
CLPB-213	ENST00000544382	ENGASE	Q8NFI3	743 aa		13.54	□□□□□ -0.24
CLPB-213	ENST00000544382	TMC2	Q8TDI7	906 aa		13.54	□□□□□ -0.24
CLPB-213	ENST00000544382	PSMG2	Q969U7	264 aa		13.54	□□□□□ -0.24
CLPB-213	ENST00000544382	MCRS1	Q96EZ8	462 aa		13.54	□□□□□ -0.24
CLPB-213	ENST00000544382	PRRX2	Q99811	253 aa		13.54	□□□□□ -0.24
CLPB-213	ENST00000544382	CRISPLD1	Q9H336	500 aa		13.54	□□□□□ -0.24
CLPB-213	ENST00000544382	SMOC2	Q9H3U7	446 aa		13.54	□□□□□ -0.24
CLPB-213	ENST00000544382	SLITRK6	Q9H5Y7	841 aa		13.54	□□□□□ -0.24
CLPB-213	ENST00000544382	WNT16	Q9UBV4	365 aa		13.54	□□□□□ -0.24
CLPB-213	ENST00000544382	CDH9	Q9ULB4	789 aa		13.54	□□□□□ -0.24
CLPB-213	ENST00000544382	ZNF318	Q5VUA4	2279 aa		13.53	□□□□□ -0.24
CLPB-213	ENST00000544382	LRRIQ3	A6PVS8	624 aa	Predicted RBP	13.53	□□□□□ -0.24
CLPB-213	ENST00000544382	GABRD	O14764	452 aa		13.53	□□□□□ -0.24
CLPB-213	ENST00000544382	IKBKB	O14920	756 aa		13.53	□□□□□ -0.24
CLPB-213	ENST00000544382	ECI2	O75521	394 aa		13.53	□□□□□ -0.24
CLPB-213	ENST00000544382	HAPLN1	P10915	354 aa	Predicted RBP	13.53	□□□□□ -0.24
CLPB-213	ENST00000544382	WARS	P23381	471 aa	Known RBP	13.53	□□□□□ -0.24
CLPB-213	ENST00000544382	ACAT1	P24752	427 aa	Known RBP	13.53	□□□□□ -0.24
CLPB-213	ENST00000544382	CDC25C	P30307	473 aa		13.53	□□□□□ -0.24
CLPB-213	ENST00000544382	PSMC2	P35998	433 aa	Known RBP	13.53	□□□□□ -0.24
CLPB-213	ENST00000544382	PPP1R2	P41236	205 aa		13.53	□□□□□ -0.24
CLPB-213	ENST00000544382	CASP4	P49662	377 aa		13.53	□□□□□ -0.24
CLPB-213	ENST00000544382	VAMP7	P51809	220 aa		13.53	□□□□□ -0.24
CLPB-213	ENST00000544382	CLDN10	P78369	228 aa		13.53	□□□□□ -0.24
CLPB-213	ENST00000544382	PFKP	Q01813	784 aa		13.53	□□□□□ -0.24
CLPB-213	ENST00000544382	ENPEP	Q07075	957 aa		13.53	□□□□□ -0.24
CLPB-213	ENST00000544382	ADAM9	Q13443	819 aa		13.53	□□□□□ -0.24
CLPB-213	ENST00000544382	NCOA4	Q13772	614 aa		13.53	□□□□□ -0.24
CLPB-213	ENST00000544382	ZNF699	Q32M78	642 aa		13.53	□□□□□ -0.24
CLPB-213	ENST00000544382	ZNF658	Q5TYW1	1059 aa	Predicted RBP	13.53	□□□□□ -0.24
CLPB-213	ENST00000544382	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	13.53	□□□□□ -0.24
CLPB-213	ENST00000544382	LRRTM3	Q86VH5	581 aa		13.53	□□□□□ -0.24
CLPB-213	ENST00000544382	FAM186B	Q8IYM0	893 aa		13.53	□□□□□ -0.24
CLPB-213	ENST00000544382	HS6ST3	Q8IZP7	471 aa		13.53	□□□□□ -0.24
CLPB-213	ENST00000544382	TTC9B	Q8N6N2	239 aa		13.53	□□□□□ -0.24
CLPB-213	ENST00000544382	FGF14	Q92915	247 aa		13.53	□□□□□ -0.24
CLPB-213	ENST00000544382	FAM122A	Q96E09	287 aa		13.53	□□□□□ -0.24
CLPB-213	ENST00000544382	TCEAL4	Q96EI5	215 aa		13.53	□□□□□ -0.24
CLPB-213	ENST00000544382	FUBP3	Q96I24	572 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
CLPB-213	ENST00000544382	SYT15	Q9BQS2	421 aa		13.53	□□□□□ -0.24
CLPB-213	ENST00000544382	DNAJC25	Q9H1X3	360 aa		13.53	□□□□□ -0.24
CLPB-213	ENST00000544382	ZFP14	Q9HCL3	533 aa		13.53	□□□□□ -0.24
CLPB-213	ENST00000544382	SLC2A4RG	Q9NR83	387 aa		13.53	□□□□□ -0.24
CLPB-213	ENST00000544382	NXF1	Q9UBU9	619 aa	Known RBP	13.53	□□□□□ -0.24
CLPB-213	ENST00000544382	CETN3	O15182	167 aa		13.52	□□□□□ -0.25
CLPB-213	ENST00000544382	NARS	O43776	548 aa	Known RBP	13.52	□□□□□ -0.25
CLPB-213	ENST00000544382	TACC1	O75410	805 aa		13.52	□□□□□ -0.25
CLPB-213	ENST00000544382	SOAT2	O75908	522 aa		13.52	□□□□□ -0.25
CLPB-213	ENST00000544382	CST3	P01034	146 aa	Predicted RBP	13.52	□□□□□ -0.25
CLPB-213	ENST00000544382	CFH	P08603	1231 aa		13.52	□□□□□ -0.25
CLPB-213	ENST00000544382	EPB41	P11171	864 aa	Known RBP	13.52	□□□□□ -0.25
CLPB-213	ENST00000544382	TRIM21	P19474	475 aa	Known RBP	13.52	□□□□□ -0.25
CLPB-213	ENST00000544382	GNL1	P36915	607 aa	Predicted RBP	13.52	□□□□□ -0.25
CLPB-213	ENST00000544382	CCR2	P41597	374 aa		13.52	□□□□□ -0.25
CLPB-213	ENST00000544382	MYL6	P60660	151 aa		13.52	□□□□□ -0.25
CLPB-213	ENST00000544382	COBLL1	Q53SF7	1204 aa		13.52	□□□□□ -0.25
CLPB-213	ENST00000544382	ZNF667	Q5HYK9	610 aa		13.52	□□□□□ -0.25
CLPB-213	ENST00000544382	TDRD10	Q5VZ19	366 aa	Known RBP	13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms