RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 TINAGL1Q9GZM7 467 aaPredicted RBP7.01□□□□□ -1.29
SKP1-213ENST00000524288 AS3MTQ9HBK9 375 aa7.01□□□□□ -1.29
SKP1-213ENST00000524288 PARPBPQ9NWS1 579 aa7.01□□□□□ -1.29
SKP1-213ENST00000524288 LUZP4Q9P127 313 aa7.01□□□□□ -1.29
SKP1-213ENST00000524288 PRR5-ARHGAP8B1AHC4 643 aa7□□□□□ -1.29
SKP1-213ENST00000524288 PYCARD-AS1I3L0S3 204 aa7□□□□□ -1.29
SKP1-213ENST00000524288 NPHP1O15259 732 aa7□□□□□ -1.29
SKP1-213ENST00000524288 VPS4BO75351 444 aa7□□□□□ -1.29
SKP1-213ENST00000524288 KIF20AO95235 890 aa7□□□□□ -1.29
SKP1-213ENST00000524288 MT-ND5P03915 603 aa7□□□□□ -1.29
SKP1-213ENST00000524288 ALAS1P13196 640 aa7□□□□□ -1.29
SKP1-213ENST00000524288 HK1P19367 917 aa7□□□□□ -1.29
SKP1-213ENST00000524288 SLC11A2P49281 568 aa7□□□□□ -1.29
SKP1-213ENST00000524288 CARSP49589 748 aaKnown RBP7□□□□□ -1.29
SKP1-213ENST00000524288 PPM1FP49593 454 aaPredicted RBP7□□□□□ -1.29
SKP1-213ENST00000524288 RAB32Q13637 225 aa7□□□□□ -1.29
SKP1-213ENST00000524288 RAPGEF1Q13905 1077 aa7□□□□□ -1.29
SKP1-213ENST00000524288 HSP90AB4PQ58FF6 505 aa7□□□□□ -1.29
SKP1-213ENST00000524288 DCAF12L1Q5VU92 463 aa7□□□□□ -1.29
SKP1-213ENST00000524288 SPTY2D1Q68D10 685 aaPredicted RBP7□□□□□ -1.29
SKP1-213ENST00000524288 USP37Q86T82 979 aa7□□□□□ -1.29
SKP1-213ENST00000524288 AOPEPQ8N6M6 819 aa7□□□□□ -1.29
SKP1-213ENST00000524288 FAM46DQ8NEK8 389 aa7□□□□□ -1.29
SKP1-213ENST00000524288 PPM1EQ8WY54 764 aa7□□□□□ -1.29
SKP1-213ENST00000524288 RAPGEF4Q8WZA2 1011 aa7□□□□□ -1.29
SKP1-213ENST00000524288 MIEF2Q96C03 454 aa7□□□□□ -1.29
SKP1-213ENST00000524288 KLHL32Q96NJ5 620 aa7□□□□□ -1.29
SKP1-213ENST00000524288 SCLT1Q96NL6 688 aa7□□□□□ -1.29
SKP1-213ENST00000524288 LDHAL6BQ9BYZ2 381 aaPredicted RBP7□□□□□ -1.29
SKP1-213ENST00000524288 CPEB1Q9BZB8 566 aaKnown RBP7□□□□□ -1.29
SKP1-213ENST00000524288 POGKQ9P215 609 aa7□□□□□ -1.29
SKP1-213ENST00000524288 ING1Q9UK53 422 aaPredicted RBP7□□□□□ -1.29
SKP1-213ENST00000524288 SH3BP1Q9Y3L3 701 aa7□□□□□ -1.29
SKP1-213ENST00000524288 E9PLN8 166 aa6.99□□□□□ -1.29
SKP1-213ENST00000524288 ADAMTS3O15072 1205 aa6.99□□□□□ -1.29
SKP1-213ENST00000524288 RASSF9O75901 435 aa6.99□□□□□ -1.29
SKP1-213ENST00000524288 ANXA2P07355 339 aaKnown RBP6.99□□□□□ -1.29
SKP1-213ENST00000524288 IL1R1P14778 569 aa6.99□□□□□ -1.29
SKP1-213ENST00000524288 GNAT2P19087 354 aa6.99□□□□□ -1.29
SKP1-213ENST00000524288 EEF1GP26641 437 aaKnown RBP6.99□□□□□ -1.29
SKP1-213ENST00000524288 PTTG1IPP53801 180 aa6.99□□□□□ -1.29
SKP1-213ENST00000524288 DGCR2P98153 550 aa6.99□□□□□ -1.29
SKP1-213ENST00000524288 CRHR2Q13324 411 aa6.99□□□□□ -1.29
SKP1-213ENST00000524288 PUM3Q15397 648 aaKnown RBP6.99□□□□□ -1.29
SKP1-213ENST00000524288 CCDC38Q502W7 563 aa6.99□□□□□ -1.29
SKP1-213ENST00000524288 SLC44A4Q53GD3 710 aa6.99□□□□□ -1.29
SKP1-213ENST00000524288 EFCAB12Q6NXP0 572 aa6.99□□□□□ -1.29
SKP1-213ENST00000524288 MED25Q71SY5 747 aa6.99□□□□□ -1.29
SKP1-213ENST00000524288 APBB1IPQ7Z5R6 666 aaPredicted RBP6.99□□□□□ -1.29
SKP1-213ENST00000524288 ZNF527Q8NB42 609 aa6.99□□□□□ -1.29
SKP1-213ENST00000524288 BRI3BPQ8WY22 251 aa6.99□□□□□ -1.29
SKP1-213ENST00000524288 CCT6BQ92526 530 aa6.99□□□□□ -1.29
SKP1-213ENST00000524288 VKORC1Q9BQB6 163 aa6.99□□□□□ -1.29
SKP1-213ENST00000524288 TTLL2Q9BWV7 592 aa6.99□□□□□ -1.29
SKP1-213ENST00000524288 TLR10Q9BXR5 811 aa6.99□□□□□ -1.29
SKP1-213ENST00000524288 ZNF518BQ9C0D4 1074 aa6.99□□□□□ -1.29
SKP1-213ENST00000524288 CEP72Q9P209 647 aa6.99□□□□□ -1.29
SKP1-213ENST00000524288 MYO1AQ9UBC5 1043 aa6.99□□□□□ -1.29
SKP1-213ENST00000524288 HDAC9Q9UKV0 1011 aa6.99□□□□□ -1.29
SKP1-213ENST00000524288 MAN2B2Q9Y2E5 1009 aa6.99□□□□□ -1.29
SKP1-213ENST00000524288 TMX2Q9Y320 296 aa6.99□□□□□ -1.29
SKP1-213ENST00000524288 WDR33Q9C0J8 1336 aaKnown RBP6.99□□□□□ -1.29
SKP1-213ENST00000524288 MYO1CO00159 1063 aa6.98□□□□□ -1.29
SKP1-213ENST00000524288 NDST3O95803 873 aa6.98□□□□□ -1.29
SKP1-213ENST00000524288 CHRM3P20309 590 aa6.98□□□□□ -1.29
SKP1-213ENST00000524288 MAKP20794 623 aa6.98□□□□□ -1.29
SKP1-213ENST00000524288 ICA1Q05084 483 aa6.98□□□□□ -1.29
SKP1-213ENST00000524288 GRM1Q13255 1194 aa6.98□□□□□ -1.29
SKP1-213ENST00000524288 RRP1BQ14684 758 aaKnown RBP6.98□□□□□ -1.29
SKP1-213ENST00000524288 ELAVL1Q15717 326 aaKnown RBP6.98□□□□□ -1.29
SKP1-213ENST00000524288 PDCD2Q16342 344 aaPredicted RBP6.98□□□□□ -1.29
SKP1-213ENST00000524288 NOMO2Q5JPE7 1267 aa6.98□□□□□ -1.29
SKP1-213ENST00000524288 IGFL4Q6B9Z1 124 aa6.98□□□□□ -1.29
SKP1-213ENST00000524288 MFSD5Q6N075 450 aa6.98□□□□□ -1.29
SKP1-213ENST00000524288 FAM83AQ86UY5 434 aa6.98□□□□□ -1.29
SKP1-213ENST00000524288 PDSS2Q86YH6 399 aa6.98□□□□□ -1.29
SKP1-213ENST00000524288 NKAPQ8N5F7 415 aaKnown RBP6.98□□□□□ -1.29
SKP1-213ENST00000524288 FITM2Q8N6M3 262 aa6.98□□□□□ -1.29
SKP1-213ENST00000524288 PDPRQ8NCN5 879 aa6.98□□□□□ -1.29
SKP1-213ENST00000524288 NSUN7Q8NE18 718 aaKnown RBP6.98□□□□□ -1.29
SKP1-213ENST00000524288 ZFP28Q8NHY6 868 aa6.98□□□□□ -1.29
SKP1-213ENST00000524288 ZNF483Q8TF39 744 aaPredicted RBP6.98□□□□□ -1.29
SKP1-213ENST00000524288 MUL1Q969V5 352 aa6.98□□□□□ -1.29
SKP1-213ENST00000524288 TMEM41AQ96HV5 264 aa6.98□□□□□ -1.29
SKP1-213ENST00000524288 COLEC11Q9BWP8 271 aa6.98□□□□□ -1.29
SKP1-213ENST00000524288 MS4A7Q9GZW8 240 aaPredicted RBP6.98□□□□□ -1.29
SKP1-213ENST00000524288 CHST8Q9H2A9 424 aa6.98□□□□□ -1.29
SKP1-213ENST00000524288 GPR35Q9HC97 309 aa6.98□□□□□ -1.29
SKP1-213ENST00000524288 RLIMQ9NVW2 624 aa6.98□□□□□ -1.29
SKP1-213ENST00000524288 CDYLQ9Y232 598 aa6.98□□□□□ -1.29
SKP1-213ENST00000524288 PLEKHM1Q9Y4G2 1056 aa6.98□□□□□ -1.29
SKP1-213ENST00000524288 CCDC180Q9P1Z9 1646 aa6.98□□□□□ -1.29
SKP1-213ENST00000524288 PIM1P11309 404 aaPredicted RBP6.97□□□□□ -1.29
SKP1-213ENST00000524288 MYL4P12829 197 aa6.97□□□□□ -1.29
SKP1-213ENST00000524288 TYRP1P17643 537 aa6.97□□□□□ -1.29
SKP1-213ENST00000524288 ALDH9A1P49189 494 aa6.97□□□□□ -1.29
SKP1-213ENST00000524288 CHN2P52757 468 aa6.97□□□□□ -1.29
SKP1-213ENST00000524288 DPTQ07507 201 aa6.97□□□□□ -1.29
SKP1-213ENST00000524288 TMEM95Q3KNT9 176 aa6.97□□□□□ -1.29
SKP1-213ENST00000524288 ZDHHC24Q6UX98 284 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms