RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 BRD8Q9H0E9 1235 aa12.53□□□□□ -0.4
PTPRF-205ENST00000414879 ISCUQ9H1K1 167 aa12.53□□□□□ -0.4
PTPRF-205ENST00000414879 HMX1Q9NP08 348 aaPredicted RBP12.53□□□□□ -0.4
PTPRF-205ENST00000414879 MAGED2Q9UNF1 606 aaPredicted RBP12.53□□□□□ -0.4
PTPRF-205ENST00000414879 E5RI56 91 aa12.53□□□□□ -0.4
PTPRF-205ENST00000414879 CYB561D2O14569 222 aa12.53□□□□□ -0.4
PTPRF-205ENST00000414879 ANKRD20A4Q4UJ75 823 aa12.53□□□□□ -0.4
PTPRF-205ENST00000414879 ANKRD20A8PQ5CZ79 823 aa12.53□□□□□ -0.4
PTPRF-205ENST00000414879 ANKRD20A2Q5SQ80 823 aa12.53□□□□□ -0.4
PTPRF-205ENST00000414879 ANKRD20A1Q5TYW2 823 aa12.53□□□□□ -0.4
PTPRF-205ENST00000414879 AGBL2Q5U5Z8 902 aa12.53□□□□□ -0.4
PTPRF-205ENST00000414879 C1orf186Q6ZWK4 172 aa12.53□□□□□ -0.4
PTPRF-205ENST00000414879 PARD3BQ8TEW8 1205 aa12.53□□□□□ -0.4
PTPRF-205ENST00000414879 ERP44Q9BS26 406 aa12.53□□□□□ -0.4
PTPRF-205ENST00000414879 MTMR12Q9C0I1 747 aa12.53□□□□□ -0.4
PTPRF-205ENST00000414879 SPDYE5A6NIY4 337 aa12.53□□□□□ -0.4
PTPRF-205ENST00000414879 SMIM24O75264 130 aa12.53□□□□□ -0.4
PTPRF-205ENST00000414879 B3GAT3O94766 335 aa12.53□□□□□ -0.4
PTPRF-205ENST00000414879 LUC7L3O95232 432 aaKnown RBP12.53□□□□□ -0.4
PTPRF-205ENST00000414879 BRAFP15056 766 aa12.53□□□□□ -0.4
PTPRF-205ENST00000414879 PTPN11Q06124 597 aaPredicted RBP12.53□□□□□ -0.4
PTPRF-205ENST00000414879 KRT33BQ14525 404 aa12.53□□□□□ -0.4
PTPRF-205ENST00000414879 ZNF268Q14587 947 aaPredicted RBP12.53□□□□□ -0.4
PTPRF-205ENST00000414879 MGAT5BQ3V5L5 792 aa12.53□□□□□ -0.4
PTPRF-205ENST00000414879 NUGGCQ68CJ6 796 aa12.53□□□□□ -0.4
PTPRF-205ENST00000414879 RASSF3Q86WH2 238 aa12.53□□□□□ -0.4
PTPRF-205ENST00000414879 SLC13A5Q86YT5 568 aaPredicted RBP12.53□□□□□ -0.4
PTPRF-205ENST00000414879 KIAA0895Q8NCT3 520 aa12.53□□□□□ -0.4
PTPRF-205ENST00000414879 SLC7A14Q8TBB6 771 aa12.53□□□□□ -0.4
PTPRF-205ENST00000414879 HNRNPLLQ8WVV9 542 aaKnown RBP12.53□□□□□ -0.4
PTPRF-205ENST00000414879 KLHL29Q96CT2 875 aa12.53□□□□□ -0.4
PTPRF-205ENST00000414879 SGSM3Q96HU1 749 aa12.53□□□□□ -0.4
PTPRF-205ENST00000414879 UROC1Q96N76 676 aa12.53□□□□□ -0.4
PTPRF-205ENST00000414879 SEZ6LQ9BYH1 1024 aa12.53□□□□□ -0.4
PTPRF-205ENST00000414879 AVENQ9NQS1 362 aaPredicted RBP12.53□□□□□ -0.4
PTPRF-205ENST00000414879 SCAF8Q9UPN6 1271 aaKnown RBP12.53□□□□□ -0.4
PTPRF-205ENST00000414879 SPATA31C2B4DYI2 1134 aa12.52□□□□□ -0.4
PTPRF-205ENST00000414879 DFFAO00273 331 aa12.52□□□□□ -0.4
PTPRF-205ENST00000414879 ZWINTO95229 277 aa12.52□□□□□ -0.4
PTPRF-205ENST00000414879 LMNAP02545 664 aaKnown RBP12.52□□□□□ -0.4
PTPRF-205ENST00000414879 TMEM132BQ14DG7 1078 aa12.52□□□□□ -0.4
PTPRF-205ENST00000414879 NYAP1Q6ZVC0 841 aa12.52□□□□□ -0.4
PTPRF-205ENST00000414879 TBC1D1Q86TI0 1168 aaPredicted RBP12.52□□□□□ -0.4
PTPRF-205ENST00000414879 EXD1Q8NHP7 514 aa12.52□□□□□ -0.4
PTPRF-205ENST00000414879 RAPGEF5Q92565 580 aa12.52□□□□□ -0.4
PTPRF-205ENST00000414879 KIFC3Q9BVG8 833 aa12.52□□□□□ -0.4
PTPRF-205ENST00000414879 EML4Q9HC35 981 aaKnown RBP12.52□□□□□ -0.4
PTPRF-205ENST00000414879 XPNPEP3Q9NQH7 507 aa12.52□□□□□ -0.4
PTPRF-205ENST00000414879 HGSO14964 777 aaPredicted RBP12.52□□□□□ -0.41
PTPRF-205ENST00000414879 ZBTB48P10074 688 aaPredicted RBP12.52□□□□□ -0.41
PTPRF-205ENST00000414879 GTF2BQ00403 316 aa12.52□□□□□ -0.41
PTPRF-205ENST00000414879 FSCN1Q16658 493 aaKnown RBP12.52□□□□□ -0.41
PTPRF-205ENST00000414879 DCAF6Q58WW2 860 aa12.52□□□□□ -0.41
PTPRF-205ENST00000414879 RABGAP1LQ5R372 815 aa12.52□□□□□ -0.41
PTPRF-205ENST00000414879 RGMBQ6NW40 437 aa12.52□□□□□ -0.41
PTPRF-205ENST00000414879 CCNI2Q6ZMN8 369 aaPredicted RBP12.52□□□□□ -0.41
PTPRF-205ENST00000414879 MYLK4Q86YV6 388 aaPredicted RBP12.52□□□□□ -0.41
PTPRF-205ENST00000414879 ABRAQ8N0Z2 381 aa12.52□□□□□ -0.41
PTPRF-205ENST00000414879 GIPC2Q8TF65 315 aa12.52□□□□□ -0.41
PTPRF-205ENST00000414879 RABEP2Q9H5N1 569 aa12.52□□□□□ -0.41
PTPRF-205ENST00000414879 OLA1Q9NTK5 396 aaKnown RBP12.52□□□□□ -0.41
PTPRF-205ENST00000414879 FAM49BQ9NUQ9 324 aa12.52□□□□□ -0.41
PTPRF-205ENST00000414879 TTC7AQ9ULT0 858 aaPredicted RBP12.52□□□□□ -0.41
PTPRF-205ENST00000414879 MAP3K7O43318 606 aa12.52□□□□□ -0.41
PTPRF-205ENST00000414879 LRG1P02750 347 aa12.52□□□□□ -0.41
PTPRF-205ENST00000414879 BRD2P25440 801 aaKnown RBP12.52□□□□□ -0.41
PTPRF-205ENST00000414879 TYK2P29597 1187 aa12.52□□□□□ -0.41
PTPRF-205ENST00000414879 ZNF280AP59817 542 aaPredicted RBP12.52□□□□□ -0.41
PTPRF-205ENST00000414879 IFT88Q13099 833 aa12.52□□□□□ -0.41
PTPRF-205ENST00000414879 MAP2K5Q13163 448 aa12.52□□□□□ -0.41
PTPRF-205ENST00000414879 MAPRE2Q15555 327 aa12.52□□□□□ -0.41
PTPRF-205ENST00000414879 KIZQ2M2Z5 673 aa12.52□□□□□ -0.41
PTPRF-205ENST00000414879 ZC3H18Q86VM9 953 aaKnown RBP12.52□□□□□ -0.41
PTPRF-205ENST00000414879 JAMLQ86YT9 394 aa12.52□□□□□ -0.41
PTPRF-205ENST00000414879 PPIL6Q8IXY8 311 aa12.52□□□□□ -0.41
PTPRF-205ENST00000414879 GLTPD2A6NH11 291 aa12.51□□□□□ -0.41
PTPRF-205ENST00000414879 ZNF197O14709 1029 aa12.51□□□□□ -0.41
PTPRF-205ENST00000414879 AP1G2O75843 785 aa12.51□□□□□ -0.41
PTPRF-205ENST00000414879 SLC4A1P02730 911 aa12.51□□□□□ -0.41
PTPRF-205ENST00000414879 RBP3P10745 1247 aa12.51□□□□□ -0.41
PTPRF-205ENST00000414879 ESRRAP11474 423 aaPredicted RBP12.51□□□□□ -0.41
PTPRF-205ENST00000414879 UBA1P22314 1058 aaKnown RBP12.51□□□□□ -0.41
PTPRF-205ENST00000414879 OXCT1P55809 520 aa12.51□□□□□ -0.41
PTPRF-205ENST00000414879 ART3Q13508 389 aa12.51□□□□□ -0.41
PTPRF-205ENST00000414879 NCAPHQ15003 741 aa12.51□□□□□ -0.41
PTPRF-205ENST00000414879 MUM1Q2TAK8 710 aa12.51□□□□□ -0.41
PTPRF-205ENST00000414879 ITIH5Q86UX2 942 aa12.51□□□□□ -0.41
PTPRF-205ENST00000414879 SPATA18Q8TC71 538 aa12.51□□□□□ -0.41
PTPRF-205ENST00000414879 ACTRT1Q8TDG2 376 aa12.51□□□□□ -0.41
PTPRF-205ENST00000414879 SEPT5Q99719 369 aaPredicted RBP12.51□□□□□ -0.41
PTPRF-205ENST00000414879 APBA2Q99767 749 aa12.51□□□□□ -0.41
PTPRF-205ENST00000414879 HINFPQ9BQA5 517 aa12.51□□□□□ -0.41
PTPRF-205ENST00000414879 FBXO44Q9H4M3 255 aa12.51□□□□□ -0.41
PTPRF-205ENST00000414879 FAM124BQ9H5Z6 455 aaPredicted RBP12.51□□□□□ -0.41
PTPRF-205ENST00000414879 STK38LQ9Y2H1 464 aa12.51□□□□□ -0.41
PTPRF-205ENST00000414879 PIK3R2O00459 728 aa12.51□□□□□ -0.41
PTPRF-205ENST00000414879 PROSCO94903 275 aa12.51□□□□□ -0.41
PTPRF-205ENST00000414879 LGALS2P05162 132 aa12.51□□□□□ -0.41
PTPRF-205ENST00000414879 ILDR1Q86SU0 546 aaPredicted RBP12.51□□□□□ -0.41
PTPRF-205ENST00000414879 UNC93AQ86WB7 457 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms