RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 THAP9Q9H5L6 903 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 FAM204AQ9H8W3 233 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 SEC31BQ9NQW1 1179 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 RRN3Q9NYV6 651 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 EHD3Q9NZN3 535 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 TRPM5Q9NZQ8 1165 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 RNF40O75150 1001 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 RETP07949 1114 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 ACAT1P24752 427 aaKnown RBP6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 SULT2A1Q06520 285 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 TRPC3Q13507 836 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 AARDQ4LEZ3 155 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 CEP55Q53EZ4 464 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 DTHD1Q6ZMT9 781 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 AGMOQ6ZNB7 445 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 ENOSF1Q7L5Y1 443 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 MB21D1Q8N884 522 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 DDI1Q8WTU0 396 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 TBCBQ99426 244 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 ERP44Q9BS26 406 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 PI4K2AQ9BTU6 479 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 BRIP1Q9BX63 1249 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 BAG5Q9UL15 447 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 VANGL2Q9ULK5 521 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 DAGLAQ9Y4D2 1042 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 MYH3P11055 1940 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 XDHP47989 1333 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 ECM29Q5VYK3 1845 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 A0A1B0GVG6 124 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 C16orf96A6NNT2 1141 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 IGF2BP3O00425 579 aaKnown RBP eCLIP6.93□□□□□ -1.33e-8■■■■□ 22.7
TM9SF4-202ENST00000398022 KMOO15229 486 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 MICAL2O94851 1124 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 PLEKHA8P1O95397 391 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 ARHGAP25P42331 645 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 LIG3P49916 1009 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 BPIFB4P59827 614 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 VBP1P61758 197 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 COG7P83436 770 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 PLOD1Q02809 727 aaPredicted RBP6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 NDUFA5Q16718 116 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 COL13A1Q5TAT6 717 aaPredicted RBP6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 TRAPPC11Q7Z392 1133 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 KDELC2Q7Z4H8 507 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 OR52K1Q8NGK4 314 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 SECISBP2Q96T21 854 aaKnown RBP6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 NTN4Q9HB63 628 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 TRPV4Q9HBA0 871 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 PNMA3Q9UL41 463 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 MYH8P13535 1937 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 ALG1L2C9J202 215 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 CYP19A1P11511 503 aaPredicted RBP6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 ARF4P18085 180 aaPredicted RBP6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 CCT5P48643 541 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 CYP4F8P98187 520 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 CUL2Q13617 745 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 MXD4Q14582 209 aaPredicted RBP6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 ZNF362Q5T0B9 420 aaPredicted RBP6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 BORAQ6PGQ7 559 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 IGF2-ASQ6U949 168 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 NUP54Q7Z3B4 507 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 KRT26Q7Z3Y9 468 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 SLC51BQ86UW2 128 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 LRRC71Q8N4P6 559 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 NKAPQ8N5F7 415 aaKnown RBP6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 NOA1Q8NC60 698 aaKnown RBP6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 LILRB4Q8NHJ6 448 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 VPS39Q96JC1 886 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 SARGQ9BW04 601 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 CRNKL1Q9BZJ0 848 aaKnown RBP6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 CDH19Q9H159 772 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 MAGEF1Q9HAY2 307 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 C12orf4Q9NQ89 552 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 IARS2Q9NSE4 1012 aaKnown RBP6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 CRNNQ9UBG3 495 aaPredicted RBP6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 CAPN11Q9UMQ6 739 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 PASKQ96RG2 1323 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 TTC26A0AVF1 554 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 F5H423 210 aaPredicted RBP6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 LCA5LO95447 670 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 ACTN1P12814 892 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 TFEBP19484 476 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 TMPRSS15P98073 1019 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 MPP1Q00013 466 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 AMPD2Q01433 879 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 TUBB8Q3ZCM7 444 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 ATP13A4Q4VNC1 1196 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 DCAF17Q5H9S7 520 aaPredicted RBP6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 TCEAL8Q8IYN2 117 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 C2orf69Q8N8R5 385 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 KCTD13Q8WZ19 329 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 ZC3H10Q96K80 434 aaKnown RBP6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 CAPZA3Q96KX2 299 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 DNAJC7Q99615 494 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 HAUS8Q9BT25 410 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 NUSAP1Q9BXS6 441 aaKnown RBP6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 CUEDC2Q9H467 287 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 NMRK2Q9NPI5 230 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 OBP2AQ9NY56 170 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 MACROD2A1Z1Q3 448 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms