RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 ANKRD1Q15327 319 aa7.07□□□□□ -1.28
TRAV35-201ENST00000390462 TBCEQ15813 527 aaPredicted RBP7.07□□□□□ -1.28
TRAV35-201ENST00000390462 TMEM266Q2M3C6 531 aa7.07□□□□□ -1.28
TRAV35-201ENST00000390462 TRIM71Q2Q1W2 868 aaKnown RBP7.07□□□□□ -1.28
TRAV35-201ENST00000390462 DUSP28Q4G0W2 176 aa7.07□□□□□ -1.28
TRAV35-201ENST00000390462 TMTC4Q5T4D3 741 aa7.07□□□□□ -1.28
TRAV35-201ENST00000390462 HLA-DQA1Q5Y7H0 255 aa7.07□□□□□ -1.28
TRAV35-201ENST00000390462 CDPF1Q6NVV7 123 aa7.07□□□□□ -1.28
TRAV35-201ENST00000390462 RNF111Q6ZNA4 994 aa7.07□□□□□ -1.28
TRAV35-201ENST00000390462 RAPH1Q70E73 1250 aa7.07□□□□□ -1.28
TRAV35-201ENST00000390462 RRAGAQ7L523 313 aa7.07□□□□□ -1.28
TRAV35-201ENST00000390462 SZRD1Q7Z422 152 aa7.07□□□□□ -1.28
TRAV35-201ENST00000390462 PXKQ7Z7A4 578 aa7.07□□□□□ -1.28
TRAV35-201ENST00000390462 FBXO11Q86XK2 927 aa7.07□□□□□ -1.28
TRAV35-201ENST00000390462 DIS3L2Q8IYB7 885 aaKnown RBP7.07□□□□□ -1.28
TRAV35-201ENST00000390462 ADSSL1Q8N142 457 aa7.07□□□□□ -1.28
TRAV35-201ENST00000390462 KCTD6Q8NC69 237 aa7.07□□□□□ -1.28
TRAV35-201ENST00000390462 IFI44Q8TCB0 444 aa7.07□□□□□ -1.28
TRAV35-201ENST00000390462 CLEC4DQ8WXI8 215 aa7.07□□□□□ -1.28
TRAV35-201ENST00000390462 CFHR4Q92496 578 aa7.07□□□□□ -1.28
TRAV35-201ENST00000390462 TBC1D5Q92609 795 aa7.07□□□□□ -1.28
TRAV35-201ENST00000390462 USP6NLQ92738 828 aa7.07□□□□□ -1.28
TRAV35-201ENST00000390462 FAM120BQ96EK7 910 aaKnown RBP7.07□□□□□ -1.28
TRAV35-201ENST00000390462 ERVK-5Q9HDB9 667 aa7.07□□□□□ -1.28
TRAV35-201ENST00000390462 TBC1D14Q9P2M4 693 aa7.07□□□□□ -1.28
TRAV35-201ENST00000390462 SMG5Q9UPR3 1016 aaKnown RBP7.07□□□□□ -1.28
TRAV35-201ENST00000390462 PAXBP1Q9Y5B6 917 aa7.07□□□□□ -1.28
TRAV35-201ENST00000390462 PSAT1Q9Y617 370 aa7.07□□□□□ -1.28
TRAV35-201ENST00000390462 CAPN6Q9Y6Q1 641 aa7.07□□□□□ -1.28
TRAV35-201ENST00000390462 PIAS3Q9Y6X2 628 aa7.07□□□□□ -1.28
TRAV35-201ENST00000390462 RICTORQ6R327 1708 aa7.07□□□□□ -1.28
TRAV35-201ENST00000390462 ABCA9Q8IUA7 1624 aa7.06□□□□□ -1.28
TRAV35-201ENST00000390462 A0A087WZ62 844 aa7.06□□□□□ -1.28
TRAV35-201ENST00000390462 IGF2BP3O00425 579 aaKnown RBP eCLIP7.06□□□□□ -1.28
TRAV35-201ENST00000390462 UBE2CO00762 179 aa7.06□□□□□ -1.28
TRAV35-201ENST00000390462 AKR1B10O60218 316 aa7.06□□□□□ -1.28
TRAV35-201ENST00000390462 LEFTY1O75610 366 aa7.06□□□□□ -1.28
TRAV35-201ENST00000390462 B3GALNT1O75752 331 aa7.06□□□□□ -1.28
TRAV35-201ENST00000390462 GOSR1O95249 250 aa7.06□□□□□ -1.28
TRAV35-201ENST00000390462 ABHD16AO95870 558 aa7.06□□□□□ -1.28
TRAV35-201ENST00000390462 TXNP10599 105 aaKnown RBP7.06□□□□□ -1.28
TRAV35-201ENST00000390462 LAMP2P13473 410 aa7.06□□□□□ -1.28
TRAV35-201ENST00000390462 EGR1P18146 543 aa7.06□□□□□ -1.28
TRAV35-201ENST00000390462 HNF4AP41235 474 aa7.06□□□□□ -1.28
TRAV35-201ENST00000390462 PHKA1P46020 1223 aa7.06□□□□□ -1.28
TRAV35-201ENST00000390462 SLC6A9P48067 706 aa7.06□□□□□ -1.28
TRAV35-201ENST00000390462 KCNJ5P48544 419 aa7.06□□□□□ -1.28
TRAV35-201ENST00000390462 TDO2P48775 406 aa7.06□□□□□ -1.28
TRAV35-201ENST00000390462 CTCFP49711 727 aaPredicted RBP7.06□□□□□ -1.28
TRAV35-201ENST00000390462 CLCN2P51788 898 aa7.06□□□□□ -1.28
TRAV35-201ENST00000390462 UBXN1Q04323 297 aa7.06□□□□□ -1.28
TRAV35-201ENST00000390462 EPS8Q12929 822 aa7.06□□□□□ -1.28
TRAV35-201ENST00000390462 STK4Q13043 487 aa7.06□□□□□ -1.28
TRAV35-201ENST00000390462 RAB32Q13637 225 aa7.06□□□□□ -1.28
TRAV35-201ENST00000390462 GPR68Q15743 365 aa7.06□□□□□ -1.28
TRAV35-201ENST00000390462 MMEL1Q495T6 779 aa7.06□□□□□ -1.28
TRAV35-201ENST00000390462 ODF2Q5BJF6 829 aa7.06□□□□□ -1.28
TRAV35-201ENST00000390462 ATPAF1Q5TC12 328 aaPredicted RBP7.06□□□□□ -1.28
TRAV35-201ENST00000390462 EMC10Q5UCC4 262 aa7.06□□□□□ -1.28
TRAV35-201ENST00000390462 MCTP2Q6DN12 878 aa7.06□□□□□ -1.28
TRAV35-201ENST00000390462 MFSD5Q6N075 450 aa7.06□□□□□ -1.28
TRAV35-201ENST00000390462 USP17L6PQ6QN14 398 aa7.06□□□□□ -1.28
TRAV35-201ENST00000390462 KLHL24Q6TFL4 600 aa7.06□□□□□ -1.28
TRAV35-201ENST00000390462 SEZ6L2Q6UXD5 910 aa7.06□□□□□ -1.28
TRAV35-201ENST00000390462 ZPBP2Q6X784 338 aa7.06□□□□□ -1.28
TRAV35-201ENST00000390462 KIAA0408Q6ZU52 694 aa7.06□□□□□ -1.28
TRAV35-201ENST00000390462 H1FNTQ75WM6 255 aaPredicted RBP7.06□□□□□ -1.28
TRAV35-201ENST00000390462 FAM214BQ7L5A3 538 aa7.06□□□□□ -1.28
TRAV35-201ENST00000390462 FAM90A1Q86YD7 464 aa7.06□□□□□ -1.28
TRAV35-201ENST00000390462 CEP97Q8IW35 865 aa7.06□□□□□ -1.28
TRAV35-201ENST00000390462 GLB1L2Q8IW92 636 aa7.06□□□□□ -1.28
TRAV35-201ENST00000390462 TAGAPQ8N103 731 aa7.06□□□□□ -1.28
TRAV35-201ENST00000390462 TTC39CQ8N584 583 aa7.06□□□□□ -1.28
TRAV35-201ENST00000390462 SRBD1Q8N5C6 995 aaKnown RBP7.06□□□□□ -1.28
TRAV35-201ENST00000390462 PHOSPHO1Q8TCT1 267 aa7.06□□□□□ -1.28
TRAV35-201ENST00000390462 CENPTQ96BT3 561 aa7.06□□□□□ -1.28
TRAV35-201ENST00000390462 RBM15Q96T37 977 aaKnown RBP eCLIP7.06□□□□□ -1.28
TRAV35-201ENST00000390462 FDXACB1Q9BRP7 624 aaPredicted RBP7.06□□□□□ -1.28
TRAV35-201ENST00000390462 NOL10Q9BSC4 688 aaKnown RBP7.06□□□□□ -1.28
TRAV35-201ENST00000390462 PITHD1Q9GZP4 211 aaPredicted RBP7.06□□□□□ -1.28
TRAV35-201ENST00000390462 TP63Q9H3D4 680 aaPredicted RBP7.06□□□□□ -1.28
TRAV35-201ENST00000390462 CHODLQ9H9P2 273 aa7.06□□□□□ -1.28
TRAV35-201ENST00000390462 MKNK2Q9HBH9 465 aa7.06□□□□□ -1.28
TRAV35-201ENST00000390462 ERVK13-1Q9NX77 482 aa7.06□□□□□ -1.28
TRAV35-201ENST00000390462 ASH2LQ9UBL3 628 aa7.06□□□□□ -1.28
TRAV35-201ENST00000390462 FTSJ1Q9UET6 329 aa7.06□□□□□ -1.28
TRAV35-201ENST00000390462 NAP1L2Q9ULW6 460 aaPredicted RBP7.06□□□□□ -1.28
TRAV35-201ENST00000390462 UGGT2Q9NYU1 1516 aa7.06□□□□□ -1.28
TRAV35-201ENST00000390462 ABCA8O94911 1581 aa7.05□□□□□ -1.28
TRAV35-201ENST00000390462 A0A0A6YYJ9 748 aa7.05□□□□□ -1.28
TRAV35-201ENST00000390462 TMEM82A0PJX8 343 aa7.05□□□□□ -1.28
TRAV35-201ENST00000390462 MBD3L4A6NDZ8 208 aaPredicted RBP7.05□□□□□ -1.28
TRAV35-201ENST00000390462 MBD3L3A6NE82 208 aaPredicted RBP7.05□□□□□ -1.28
TRAV35-201ENST00000390462 PTGES3LE9PB15 166 aa7.05□□□□□ -1.28
TRAV35-201ENST00000390462 HGSO14964 777 aaPredicted RBP7.05□□□□□ -1.28
TRAV35-201ENST00000390462 DNPH1O43598 174 aa7.05□□□□□ -1.28
TRAV35-201ENST00000390462 CLEC3BP05452 202 aa7.05□□□□□ -1.28
TRAV35-201ENST00000390462 QDPRP09417 244 aa7.05□□□□□ -1.28
TRAV35-201ENST00000390462 THEGLP0DJG4 465 aa7.05□□□□□ -1.28
TRAV35-201ENST00000390462 DESP17661 470 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms