RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 TTLL13PA6NNM8 815 aa8.66□□□□□ -1.02
HPS4-201ENST00000336873 I3L4J1 428 aa8.66□□□□□ -1.02
HPS4-201ENST00000336873 DDNO94850 711 aaPredicted RBP8.66□□□□□ -1.02
HPS4-201ENST00000336873 TTC4O95801 387 aa8.66□□□□□ -1.02
HPS4-201ENST00000336873 GAD2Q05329 585 aa8.66□□□□□ -1.02
HPS4-201ENST00000336873 CACNB2Q08289 660 aaPredicted RBP8.66□□□□□ -1.02
HPS4-201ENST00000336873 GEN1Q17RS7 908 aa8.66□□□□□ -1.02
HPS4-201ENST00000336873 KIZQ2M2Z5 673 aa8.66□□□□□ -1.02
HPS4-201ENST00000336873 ANKRD20A8PQ5CZ79 823 aa8.66□□□□□ -1.02
HPS4-201ENST00000336873 LRIG3Q6UXM1 1119 aa8.66□□□□□ -1.02
HPS4-201ENST00000336873 NSMCE1Q8WV22 266 aa8.66□□□□□ -1.02
HPS4-201ENST00000336873 KIF12Q96FN5 646 aa8.66□□□□□ -1.02
HPS4-201ENST00000336873 APOL2Q9BQE5 337 aa8.66□□□□□ -1.02
HPS4-201ENST00000336873 IL1RAPL1Q9NZN1 696 aa8.66□□□□□ -1.02
HPS4-201ENST00000336873 XPO7Q9UIA9 1087 aaKnown RBP8.66□□□□□ -1.02
HPS4-201ENST00000336873 PLCH1Q4KWH8 1693 aa8.66□□□□□ -1.02
HPS4-201ENST00000336873 MYO18AQ92614 2054 aaKnown RBP8.66□□□□□ -1.02
HPS4-201ENST00000336873 SDK1Q7Z5N4 2213 aa8.65□□□□□ -1.02
HPS4-201ENST00000336873 A6NJR5 290 aa8.65□□□□□ -1.02
HPS4-201ENST00000336873 CFLARO15519 480 aa8.65□□□□□ -1.02
HPS4-201ENST00000336873 CHRNB2P17787 502 aa8.65□□□□□ -1.02
HPS4-201ENST00000336873 ITIH2P19823 946 aa8.65□□□□□ -1.02
HPS4-201ENST00000336873 PHBP35232 272 aa8.65□□□□□ -1.02
HPS4-201ENST00000336873 TAF5Q15542 800 aa8.65□□□□□ -1.02
HPS4-201ENST00000336873 FAM160B1Q5W0V3 765 aa8.65□□□□□ -1.02
HPS4-201ENST00000336873 C15orf52Q6ZUT6 534 aaKnown RBP8.65□□□□□ -1.02
HPS4-201ENST00000336873 SCUBE3Q8IX30 993 aa8.65□□□□□ -1.02
HPS4-201ENST00000336873 FUKQ8N0W3 1084 aa8.65□□□□□ -1.02
HPS4-201ENST00000336873 SLC16A10Q8TF71 515 aa8.65□□□□□ -1.02
HPS4-201ENST00000336873 SGSM3Q96HU1 749 aa8.65□□□□□ -1.02
HPS4-201ENST00000336873 FAM129AQ9BZQ8 928 aa8.65□□□□□ -1.02
HPS4-201ENST00000336873 RANBP17Q9H2T7 1088 aaKnown RBP8.65□□□□□ -1.02
HPS4-201ENST00000336873 NINJ2Q9NZG7 142 aa8.65□□□□□ -1.02
HPS4-201ENST00000336873 PACSIN3Q9UKS6 424 aa8.65□□□□□ -1.02
HPS4-201ENST00000336873 ZMYM2Q9UBW7 1377 aa8.65□□□□□ -1.02
HPS4-201ENST00000336873 GTPBP10A4D1E9 387 aaKnown RBP8.65□□□□□ -1.02
HPS4-201ENST00000336873 LPXNO60711 386 aa8.65□□□□□ -1.02
HPS4-201ENST00000336873 CPP00450 1065 aa8.65□□□□□ -1.02
HPS4-201ENST00000336873 BCAR1P56945 870 aa8.65□□□□□ -1.02
HPS4-201ENST00000336873 JAM2P57087 298 aa8.65□□□□□ -1.02
HPS4-201ENST00000336873 SKOR1P84550 965 aa8.65□□□□□ -1.02
HPS4-201ENST00000336873 ALCAMQ13740 583 aa8.65□□□□□ -1.02
HPS4-201ENST00000336873 TMEM132BQ14DG7 1078 aa8.65□□□□□ -1.02
HPS4-201ENST00000336873 CLEC16AQ2KHT3 1053 aa8.65□□□□□ -1.02
HPS4-201ENST00000336873 HSDL1Q3SXM5 330 aa8.65□□□□□ -1.02
HPS4-201ENST00000336873 POTEAQ6S8J7 498 aa8.65□□□□□ -1.02
HPS4-201ENST00000336873 ZCCHC23Q6ZST2 131 aa8.65□□□□□ -1.02
HPS4-201ENST00000336873 SDCCAG8Q86SQ7 713 aaPredicted RBP8.65□□□□□ -1.02
HPS4-201ENST00000336873 ACOT1Q86TX2 421 aa8.65□□□□□ -1.02
HPS4-201ENST00000336873 C4orf19Q8IY42 314 aa8.65□□□□□ -1.02
HPS4-201ENST00000336873 FAM71AQ8IYT1 594 aa8.65□□□□□ -1.02
HPS4-201ENST00000336873 ZDHHC14Q8IZN3 488 aa8.65□□□□□ -1.02
HPS4-201ENST00000336873 MCUQ8NE86 351 aa8.65□□□□□ -1.02
HPS4-201ENST00000336873 CDHR1Q96JP9 859 aa8.65□□□□□ -1.02
HPS4-201ENST00000336873 VPS11Q9H270 941 aa8.65□□□□□ -1.02
HPS4-201ENST00000336873 ZFP69BQ9UJL9 534 aa8.65□□□□□ -1.02
HPS4-201ENST00000336873 PCDHA3Q9Y5H8 950 aa8.65□□□□□ -1.02
HPS4-201ENST00000336873 SCINQ9Y6U3 715 aa8.65□□□□□ -1.02
HPS4-201ENST00000336873 GOLGA8CPA6NN73 597 aa8.65□□□□□ -1.03
HPS4-201ENST00000336873 ENO4A6NNW6 628 aa8.65□□□□□ -1.03
HPS4-201ENST00000336873 GOLGA8TH3BQL2 631 aa8.65□□□□□ -1.03
HPS4-201ENST00000336873 ATP9BO43861 1147 aa8.65□□□□□ -1.03
HPS4-201ENST00000336873 CD48P09326 243 aa8.65□□□□□ -1.03
HPS4-201ENST00000336873 ESRRAP11474 423 aaPredicted RBP8.65□□□□□ -1.03
HPS4-201ENST00000336873 RAD23BP54727 409 aa8.65□□□□□ -1.03
HPS4-201ENST00000336873 ALDH18A1P54886 795 aaKnown RBP8.65□□□□□ -1.03
HPS4-201ENST00000336873 AGBL2Q5U5Z8 902 aa8.65□□□□□ -1.03
HPS4-201ENST00000336873 SLFN12LQ6IEE8 588 aa8.65□□□□□ -1.03
HPS4-201ENST00000336873 CATSPER4Q7RTX7 472 aa8.65□□□□□ -1.03
HPS4-201ENST00000336873 PCGF5Q86SE9 256 aa8.65□□□□□ -1.03
HPS4-201ENST00000336873 SLC25A41Q8N5S1 370 aa8.65□□□□□ -1.03
HPS4-201ENST00000336873 FBXO36Q8NEA4 188 aa8.65□□□□□ -1.03
HPS4-201ENST00000336873 MRPL4Q9BYD3 311 aaKnown RBP8.65□□□□□ -1.03
HPS4-201ENST00000336873 SIK2Q9H0K1 926 aa8.65□□□□□ -1.03
HPS4-201ENST00000336873 ACTR5Q9H9F9 607 aaPredicted RBP8.65□□□□□ -1.03
HPS4-201ENST00000336873 IP6K2Q9UHH9 426 aa8.65□□□□□ -1.03
HPS4-201ENST00000336873 A0A087WZ62 844 aa8.64□□□□□ -1.03
HPS4-201ENST00000336873 EME2A4GXA9 379 aaPredicted RBP8.64□□□□□ -1.03
HPS4-201ENST00000336873 FAM47DPA6NHR8 397 aa8.64□□□□□ -1.03
HPS4-201ENST00000336873 GYG2O15488 501 aa8.64□□□□□ -1.03
HPS4-201ENST00000336873 EXTL3O43909 919 aa8.64□□□□□ -1.03
HPS4-201ENST00000336873 OATP04181 439 aa8.64□□□□□ -1.03
HPS4-201ENST00000336873 ENO1P06733 434 aaKnown RBP8.64□□□□□ -1.03
HPS4-201ENST00000336873 ZNF286BP0CG31 522 aa8.64□□□□□ -1.03
HPS4-201ENST00000336873 ADRA1DP25100 572 aa8.64□□□□□ -1.03
HPS4-201ENST00000336873 RPA3P35244 121 aaPredicted RBP8.64□□□□□ -1.03
HPS4-201ENST00000336873 ACCSLQ4AC99 568 aa8.64□□□□□ -1.03
HPS4-201ENST00000336873 KCNV1Q6PIU1 500 aa8.64□□□□□ -1.03
HPS4-201ENST00000336873 ZNF662Q6ZS27 426 aa8.64□□□□□ -1.03
HPS4-201ENST00000336873 ADAM32Q8TC27 787 aa8.64□□□□□ -1.03
HPS4-201ENST00000336873 SHC3Q92529 594 aa8.64□□□□□ -1.03
HPS4-201ENST00000336873 LPAR1Q92633 364 aa8.64□□□□□ -1.03
HPS4-201ENST00000336873 NUDCD1Q96RS6 583 aa8.64□□□□□ -1.03
HPS4-201ENST00000336873 FDXACB1Q9BRP7 624 aaPredicted RBP8.64□□□□□ -1.03
HPS4-201ENST00000336873 HERPUD2Q9BSE4 406 aa8.64□□□□□ -1.03
HPS4-201ENST00000336873 DCLK3Q9C098 648 aa8.64□□□□□ -1.03
HPS4-201ENST00000336873 SLC38A10Q9HBR0 1119 aa8.64□□□□□ -1.03
HPS4-201ENST00000336873 PCMTD2Q9NV79 361 aa8.64□□□□□ -1.03
HPS4-201ENST00000336873 UBP1Q9NZI7 540 aa8.64□□□□□ -1.03
HPS4-201ENST00000336873 PHTF1Q9UMS5 762 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms