RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 DYRK4Q9NR20 520 aa13.22□□□□□ -0.29
SYNM-203ENST00000560674 LRRIQ3A6PVS8 624 aaPredicted RBP13.21□□□□□ -0.29
SYNM-203ENST00000560674 UBE3AQ05086 875 aa13.21□□□□□ -0.29
SYNM-203ENST00000560674 OLFML2BQ68BL8 750 aa13.21□□□□□ -0.29
SYNM-203ENST00000560674 ABCA6Q8N139 1617 aa13.21□□□□□ -0.29
SYNM-203ENST00000560674 E2F8A0AVK6 867 aa13.21□□□□□ -0.29
SYNM-203ENST00000560674 NBPF26B4DH59 902 aa13.21□□□□□ -0.29
SYNM-203ENST00000560674 FKBP9O95302 570 aa13.21□□□□□ -0.29
SYNM-203ENST00000560674 GPD1P21695 349 aa13.21□□□□□ -0.29
SYNM-203ENST00000560674 CDC42EP1Q00587 391 aa13.21□□□□□ -0.29
SYNM-203ENST00000560674 GRIN1Q05586 938 aa13.21□□□□□ -0.29
SYNM-203ENST00000560674 WLSQ5T9L3 541 aa13.21□□□□□ -0.29
SYNM-203ENST00000560674 FKBP9P1Q75LS8 142 aa13.21□□□□□ -0.29
SYNM-203ENST00000560674 NBPF15Q8N660 670 aa13.21□□□□□ -0.29
SYNM-203ENST00000560674 NOD2Q9HC29 1040 aa13.21□□□□□ -0.29
SYNM-203ENST00000560674 IL18RAPO95256 599 aa13.21□□□□□ -0.29
SYNM-203ENST00000560674 RBP3P10745 1247 aa13.21□□□□□ -0.29
SYNM-203ENST00000560674 FNTAP49354 379 aa13.21□□□□□ -0.29
SYNM-203ENST00000560674 FXR2P51116 673 aaKnown RBP eCLIP13.21□□□□□ -0.29
SYNM-203ENST00000560674 C3orf20Q8ND61 904 aa13.21□□□□□ -0.29
SYNM-203ENST00000560674 FEZF2Q8TBJ5 459 aa13.21□□□□□ -0.29
SYNM-203ENST00000560674 ZNF512BQ96KM6 892 aaPredicted RBP13.21□□□□□ -0.29
SYNM-203ENST00000560674 CD274Q9NZQ7 290 aa13.21□□□□□ -0.29
SYNM-203ENST00000560674 DLGAP2Q9P1A6 1054 aa13.21□□□□□ -0.29
SYNM-203ENST00000560674 DAGLAQ9Y4D2 1042 aa13.21□□□□□ -0.29
SYNM-203ENST00000560674 ZC3H4Q9UPT8 1303 aaKnown RBP13.21□□□□□ -0.29
SYNM-203ENST00000560674 CAND2O75155 1236 aa13.21□□□□□ -0.29
SYNM-203ENST00000560674 NDUFB10O96000 172 aa13.21□□□□□ -0.29
SYNM-203ENST00000560674 HNRNPH1P31943 449 aaKnown RBP13.21□□□□□ -0.29
SYNM-203ENST00000560674 KCNK10P57789 538 aa13.21□□□□□ -0.29
SYNM-203ENST00000560674 MDM1Q8TC05 714 aa13.21□□□□□ -0.29
SYNM-203ENST00000560674 ABHD8Q96I13 439 aa13.21□□□□□ -0.29
SYNM-203ENST00000560674 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.21□□□□□ -0.29
SYNM-203ENST00000560674 SLC30A1Q9Y6M5 507 aa13.21□□□□□ -0.29
SYNM-203ENST00000560674 CNTNAP5Q8WYK1 1306 aa13.21□□□□□ -0.3
SYNM-203ENST00000560674 M0R3G1 203 aa13.21□□□□□ -0.3
SYNM-203ENST00000560674 GRAP2O75791 330 aa13.21□□□□□ -0.3
SYNM-203ENST00000560674 DGKIO75912 1065 aa13.21□□□□□ -0.3
SYNM-203ENST00000560674 FDPSP14324 419 aaKnown RBP13.21□□□□□ -0.3
SYNM-203ENST00000560674 PLOD1Q02809 727 aaPredicted RBP13.21□□□□□ -0.3
SYNM-203ENST00000560674 RUNX1T1Q06455 604 aa13.21□□□□□ -0.3
SYNM-203ENST00000560674 PABPC5Q96DU9 382 aaKnown RBP13.21□□□□□ -0.3
SYNM-203ENST00000560674 PRPF18Q99633 342 aaKnown RBP13.21□□□□□ -0.3
SYNM-203ENST00000560674 FRMD8Q9BZ67 464 aaPredicted RBP13.21□□□□□ -0.3
SYNM-203ENST00000560674 CARD9Q9H257 536 aa13.21□□□□□ -0.3
SYNM-203ENST00000560674 NYAP2Q9P242 653 aa13.21□□□□□ -0.3
SYNM-203ENST00000560674 PKP3Q9Y446 797 aa13.21□□□□□ -0.3
SYNM-203ENST00000560674 ZNF263O14978 683 aa13.2□□□□□ -0.3
SYNM-203ENST00000560674 XPO1O14980 1071 aaKnown RBP13.2□□□□□ -0.3
SYNM-203ENST00000560674 ACADSBP45954 432 aa13.2□□□□□ -0.3
SYNM-203ENST00000560674 CPA2P48052 419 aa13.2□□□□□ -0.3
SYNM-203ENST00000560674 HSPA13P48723 471 aa13.2□□□□□ -0.3
SYNM-203ENST00000560674 HMGCS2P54868 508 aa13.2□□□□□ -0.3
SYNM-203ENST00000560674 ACBD5Q5T8D3 534 aaPredicted RBP13.2□□□□□ -0.3
SYNM-203ENST00000560674 GPAT2Q6NUI2 795 aa13.2□□□□□ -0.3
SYNM-203ENST00000560674 TPCN2Q8NHX9 752 aa13.2□□□□□ -0.3
SYNM-203ENST00000560674 C17orf80Q9BSJ5 609 aa13.2□□□□□ -0.3
SYNM-203ENST00000560674 NT5C1AQ9BXI3 368 aa13.2□□□□□ -0.3
SYNM-203ENST00000560674 SCN3BQ9NY72 215 aa13.2□□□□□ -0.3
SYNM-203ENST00000560674 PAIP2BQ9ULR5 123 aaKnown RBP13.2□□□□□ -0.3
SYNM-203ENST00000560674 TRAPPC3O43617 180 aa13.2□□□□□ -0.3
SYNM-203ENST00000560674 ARIH2O95376 493 aa13.2□□□□□ -0.3
SYNM-203ENST00000560674 ACADSP16219 412 aa13.2□□□□□ -0.3
SYNM-203ENST00000560674 RFC5P40937 340 aa13.2□□□□□ -0.3
SYNM-203ENST00000560674 COPAP53621 1224 aa13.2□□□□□ -0.3
SYNM-203ENST00000560674 DEFA1P59665 94 aa13.2□□□□□ -0.3
SYNM-203ENST00000560674 DEFA3P59666 94 aa13.2□□□□□ -0.3
SYNM-203ENST00000560674 LRRC74AQ0VAA2 488 aa13.2□□□□□ -0.3
SYNM-203ENST00000560674 MTMR2Q13614 643 aa13.2□□□□□ -0.3
SYNM-203ENST00000560674 AARS2Q5JTZ9 985 aaKnown RBP13.2□□□□□ -0.3
SYNM-203ENST00000560674 BRINP3Q76B58 766 aa13.2□□□□□ -0.3
SYNM-203ENST00000560674 LRRC34Q8IZ02 419 aa13.2□□□□□ -0.3
SYNM-203ENST00000560674 TBC1D19Q8N5T2 526 aa13.2□□□□□ -0.3
SYNM-203ENST00000560674 KCTD17Q8N5Z5 321 aa13.2□□□□□ -0.3
SYNM-203ENST00000560674 CASKIN2Q8WXE0 1202 aa13.2□□□□□ -0.3
SYNM-203ENST00000560674 GOLPH3Q9H4A6 298 aa13.2□□□□□ -0.3
SYNM-203ENST00000560674 LATS2Q9NRM7 1088 aa13.2□□□□□ -0.3
SYNM-203ENST00000560674 LOC100653049A0A140TA62 436 aa13.2□□□□□ -0.3
SYNM-203ENST00000560674 KRT34O76011 436 aa13.2□□□□□ -0.3
SYNM-203ENST00000560674 DNAJC3Q13217 504 aa13.2□□□□□ -0.3
SYNM-203ENST00000560674 SMTNL2Q2TAL5 461 aa13.2□□□□□ -0.3
SYNM-203ENST00000560674 EFL1Q7Z2Z2 1120 aaKnown RBP13.2□□□□□ -0.3
SYNM-203ENST00000560674 PHF21AQ96BD5 680 aa13.2□□□□□ -0.3
SYNM-203ENST00000560674 FOPNLQ96NB1 174 aa13.2□□□□□ -0.3
SYNM-203ENST00000560674 RIC8BQ9NVN3 520 aa13.2□□□□□ -0.3
SYNM-203ENST00000560674 BAATQ14032 418 aaPredicted RBP13.2□□□□□ -0.3
SYNM-203ENST00000560674 PCSK7Q16549 785 aa13.2□□□□□ -0.3
SYNM-203ENST00000560674 SLC13A5Q86YT5 568 aaPredicted RBP13.2□□□□□ -0.3
SYNM-203ENST00000560674 REXO1L1PQ8IX06 675 aa13.2□□□□□ -0.3
SYNM-203ENST00000560674 FAM71DQ8N9W8 422 aa13.2□□□□□ -0.3
SYNM-203ENST00000560674 OR6J1Q8NGC5 347 aa13.2□□□□□ -0.3
SYNM-203ENST00000560674 EXTL3O43909 919 aa13.2□□□□□ -0.3
SYNM-203ENST00000560674 CYBBP04839 570 aa13.2□□□□□ -0.3
SYNM-203ENST00000560674 PDGFRBP09619 1106 aa13.2□□□□□ -0.3
SYNM-203ENST00000560674 RPA1P27694 616 aa13.2□□□□□ -0.3
SYNM-203ENST00000560674 GTF2H1P32780 548 aa13.2□□□□□ -0.3
SYNM-203ENST00000560674 HORMAD1Q86X24 394 aa13.2□□□□□ -0.3
SYNM-203ENST00000560674 TNIP2Q8NFZ5 429 aa13.2□□□□□ -0.3
SYNM-203ENST00000560674 SMARCAD1Q9H4L7 1026 aa13.2□□□□□ -0.3
SYNM-203ENST00000560674 SEPT3Q9UH03 358 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms