RNA–Protein interactions for RNA: ENST00000553546.1

SDR39U1-205, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 648 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-205ENST00000553546 PANK2Q9BZ23 570 aa16.34■□□□□ 0.21
SDR39U1-205ENST00000553546 PLA2G2FQ9BZM2 168 aa16.34■□□□□ 0.21
SDR39U1-205ENST00000553546 TNMDQ9H2S6 317 aa16.34■□□□□ 0.21
SDR39U1-205ENST00000553546 LTB4R2Q9NPC1 389 aa16.34■□□□□ 0.21
SDR39U1-205ENST00000553546 EPG5Q9HCE0 2579 aa16.34■□□□□ 0.21
SDR39U1-205ENST00000553546 EP300Q09472 2414 aaPredicted RBP16.33■□□□□ 0.2
SDR39U1-205ENST00000553546 A0A087X0B3 334 aa16.33■□□□□ 0.2
SDR39U1-205ENST00000553546 FAM170BA6NMN3 283 aa16.33■□□□□ 0.2
SDR39U1-205ENST00000553546 KPNA7A9QM74 516 aa16.33■□□□□ 0.2
SDR39U1-205ENST00000553546 KIAA0391O15091 583 aaKnown RBP16.33■□□□□ 0.2
SDR39U1-205ENST00000553546 MOSPD3O75425 235 aa16.33■□□□□ 0.2
SDR39U1-205ENST00000553546 KRT37O76014 449 aa16.33■□□□□ 0.2
SDR39U1-205ENST00000553546 YEATS4O95619 227 aa16.33■□□□□ 0.2
SDR39U1-205ENST00000553546 PSMC3P17980 439 aa16.33■□□□□ 0.2
SDR39U1-205ENST00000553546 AMPD3Q01432 767 aa16.33■□□□□ 0.2
SDR39U1-205ENST00000553546 KCNA1Q09470 495 aa16.33■□□□□ 0.2
SDR39U1-205ENST00000553546 VEPH1Q14D04 833 aa16.33■□□□□ 0.2
SDR39U1-205ENST00000553546 TEAD2Q15562 447 aa16.33■□□□□ 0.2
SDR39U1-205ENST00000553546 POTEHQ6S545 545 aa16.33■□□□□ 0.2
SDR39U1-205ENST00000553546 ZNF852Q6ZMS4 543 aa16.33■□□□□ 0.2
SDR39U1-205ENST00000553546 TMC8Q8IU68 726 aa16.33■□□□□ 0.2
SDR39U1-205ENST00000553546 ATAD1Q8NBU5 361 aa16.33■□□□□ 0.2
SDR39U1-205ENST00000553546 OR10T2Q8NGX3 314 aa16.33■□□□□ 0.2
SDR39U1-205ENST00000553546 ZSCAN18Q8TBC5 510 aaPredicted RBP16.33■□□□□ 0.2
SDR39U1-205ENST00000553546 PSMG2Q969U7 264 aa16.33■□□□□ 0.2
SDR39U1-205ENST00000553546 ZCWPW1Q9H0M4 648 aa16.33■□□□□ 0.2
SDR39U1-205ENST00000553546 DNAJC25Q9H1X3 360 aa16.33■□□□□ 0.2
SDR39U1-205ENST00000553546 IKZF4Q9H2S9 585 aa16.33■□□□□ 0.2
SDR39U1-205ENST00000553546 CRISPLD1Q9H336 500 aa16.33■□□□□ 0.2
SDR39U1-205ENST00000553546 TRPV5Q9NQA5 729 aa16.33■□□□□ 0.2
SDR39U1-205ENST00000553546 RBAKQ9NYW8 714 aaPredicted RBP16.33■□□□□ 0.2
SDR39U1-205ENST00000553546 A0A1W2PRU2 124 aa16.32■□□□□ 0.2
SDR39U1-205ENST00000553546 MAN2B1O00754 1011 aa16.32■□□□□ 0.2
SDR39U1-205ENST00000553546 GLULP15104 373 aa16.32■□□□□ 0.2
SDR39U1-205ENST00000553546 CASP5P51878 434 aa16.32■□□□□ 0.2
SDR39U1-205ENST00000553546 TFAMQ00059 246 aaKnown RBP16.32■□□□□ 0.2
SDR39U1-205ENST00000553546 GRM2Q14416 872 aa16.32■□□□□ 0.2
SDR39U1-205ENST00000553546 SLC39A12Q504Y0 691 aa16.32■□□□□ 0.2
SDR39U1-205ENST00000553546 ARHGAP15Q53QZ3 475 aa16.32■□□□□ 0.2
SDR39U1-205ENST00000553546 VITQ6UXI7 678 aa16.32■□□□□ 0.2
SDR39U1-205ENST00000553546 ZFHX4Q86UP3 3567 aa16.32■□□□□ 0.2
SDR39U1-205ENST00000553546 HSCBQ8IWL3 235 aa16.32■□□□□ 0.2
SDR39U1-205ENST00000553546 SHKBP1Q8TBC3 707 aa16.32■□□□□ 0.2
SDR39U1-205ENST00000553546 SPPL2BQ8TCT7 592 aa16.32■□□□□ 0.2
SDR39U1-205ENST00000553546 SAAL1Q96ER3 474 aa16.32■□□□□ 0.2
SDR39U1-205ENST00000553546 TMEM209Q96SK2 561 aa16.32■□□□□ 0.2
SDR39U1-205ENST00000553546 LRRC3Q9BY71 257 aa16.32■□□□□ 0.2
SDR39U1-205ENST00000553546 HEBP1Q9NRV9 189 aa16.32■□□□□ 0.2
SDR39U1-205ENST00000553546 SLC27A5Q9Y2P5 690 aa16.32■□□□□ 0.2
SDR39U1-205ENST00000553546 PATJQ8NI35 1801 aa16.31■□□□□ 0.2
SDR39U1-205ENST00000553546 LAMTOR5O43504 91 aa16.31■□□□□ 0.2
SDR39U1-205ENST00000553546 EXTL3O43909 919 aa16.31■□□□□ 0.2
SDR39U1-205ENST00000553546 CUTAO60888 179 aa16.31■□□□□ 0.2
SDR39U1-205ENST00000553546 HSP90AA1P07900 732 aaKnown RBP16.31■□□□□ 0.2
SDR39U1-205ENST00000553546 GJA1P17302 382 aa16.31■□□□□ 0.2
SDR39U1-205ENST00000553546 GDI1P31150 447 aa16.31■□□□□ 0.2
SDR39U1-205ENST00000553546 RPS9P46781 194 aaKnown RBP16.31■□□□□ 0.2
SDR39U1-205ENST00000553546 MGAT5BQ3V5L5 792 aa16.31■□□□□ 0.2
SDR39U1-205ENST00000553546 WSCD1Q658N2 575 aa16.31■□□□□ 0.2
SDR39U1-205ENST00000553546 DNAJB7Q7Z6W7 309 aaPredicted RBP16.31■□□□□ 0.2
SDR39U1-205ENST00000553546 MFSD6LQ8IWD5 586 aa16.31■□□□□ 0.2
SDR39U1-205ENST00000553546 DCP1BQ8IZD4 617 aaKnown RBP16.31■□□□□ 0.2
SDR39U1-205ENST00000553546 LRRC52Q8N7C0 313 aa16.31■□□□□ 0.2
SDR39U1-205ENST00000553546 FAM200AQ8TCP9 573 aa16.31■□□□□ 0.2
SDR39U1-205ENST00000553546 BORCS6Q96GS4 357 aa16.31■□□□□ 0.2
SDR39U1-205ENST00000553546 ZSWIM3Q96MP5 696 aa16.31■□□□□ 0.2
SDR39U1-205ENST00000553546 GCNAQ96QF7 691 aa16.31■□□□□ 0.2
SDR39U1-205ENST00000553546 SEPT5Q99719 369 aaPredicted RBP16.31■□□□□ 0.2
SDR39U1-205ENST00000553546 KBTBD4Q9NVX7 518 aa16.31■□□□□ 0.2
SDR39U1-205ENST00000553546 SPATA6Q9NWH7 488 aaPredicted RBP16.31■□□□□ 0.2
SDR39U1-205ENST00000553546 FBXO4Q9UKT5 387 aa16.31■□□□□ 0.2
SDR39U1-205ENST00000553546 ITGA11Q9UKX5 1188 aa16.31■□□□□ 0.2
SDR39U1-205ENST00000553546 FANCMQ8IYD8 2048 aa16.3■□□□□ 0.2
SDR39U1-205ENST00000553546 NRG2O14511 850 aaPredicted RBP16.3■□□□□ 0.2
SDR39U1-205ENST00000553546 ZNF263O14978 683 aa16.3■□□□□ 0.2
SDR39U1-205ENST00000553546 LRRN2O75325 713 aa16.3■□□□□ 0.2
SDR39U1-205ENST00000553546 ITGB3P05106 788 aa16.3■□□□□ 0.2
SDR39U1-205ENST00000553546 SP9P0CG40 484 aa16.3■□□□□ 0.2
SDR39U1-205ENST00000553546 CD72P21854 359 aa16.3■□□□□ 0.2
SDR39U1-205ENST00000553546 TARSP26639 723 aaKnown RBP16.3■□□□□ 0.2
SDR39U1-205ENST00000553546 POLR2BP30876 1174 aaKnown RBP16.3■□□□□ 0.2
SDR39U1-205ENST00000553546 TSPY1Q01534 308 aa16.3■□□□□ 0.2
SDR39U1-205ENST00000553546 SURF1Q15526 300 aa16.3■□□□□ 0.2
SDR39U1-205ENST00000553546 E2F4Q16254 413 aa16.3■□□□□ 0.2
SDR39U1-205ENST00000553546 ZNF528Q3MIS6 628 aa16.3■□□□□ 0.2
SDR39U1-205ENST00000553546 C1orf228Q6PIY5 440 aa16.3■□□□□ 0.2
SDR39U1-205ENST00000553546 YAF2Q8IY57 180 aa16.3■□□□□ 0.2
SDR39U1-205ENST00000553546 GPD1LQ8N335 351 aa16.3■□□□□ 0.2
SDR39U1-205ENST00000553546 TTC9BQ8N6N2 239 aa16.3■□□□□ 0.2
SDR39U1-205ENST00000553546 C1orf127Q8N9H9 656 aa16.3■□□□□ 0.2
SDR39U1-205ENST00000553546 IQUBQ8NA54 791 aa16.3■□□□□ 0.2
SDR39U1-205ENST00000553546 SPATA18Q8TC71 538 aa16.3■□□□□ 0.2
SDR39U1-205ENST00000553546 CLDN23Q96B33 292 aa16.3■□□□□ 0.2
SDR39U1-205ENST00000553546 MSANTD3Q96H12 275 aa16.3■□□□□ 0.2
SDR39U1-205ENST00000553546 CBWD1Q9BRT8 395 aa16.3■□□□□ 0.2
SDR39U1-205ENST00000553546 TRIM9Q9C026 710 aa16.3■□□□□ 0.2
SDR39U1-205ENST00000553546 ATXN3LQ9H3M9 355 aa16.3■□□□□ 0.2
SDR39U1-205ENST00000553546 MAGEF1Q9HAY2 307 aa16.3■□□□□ 0.2
SDR39U1-205ENST00000553546 ZNF334Q9HCZ1 680 aaPredicted RBP16.3■□□□□ 0.2
SDR39U1-205ENST00000553546 TFIP11Q9UBB9 837 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms