RNA–Protein interactions for RNA: ENST00000530818.1

PTPN11-203, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 3

Gene PTPN11, Length 486 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-203ENST00000530818 CDK5RAP3Q96JB5 506 aa3.32□□□□□ -1.88
PTPN11-203ENST00000530818 PNKPQ96T60 521 aa3.32□□□□□ -1.88
PTPN11-203ENST00000530818 PACSIN1Q9BY11 444 aa3.32□□□□□ -1.88
PTPN11-203ENST00000530818 WDR11Q9BZH6 1224 aa3.32□□□□□ -1.88
PTPN11-203ENST00000530818 IMPG2Q9BZV3 1241 aa3.32□□□□□ -1.88
PTPN11-203ENST00000530818 TMEM60Q9H2L4 133 aa3.32□□□□□ -1.88
PTPN11-203ENST00000530818 SERHL2Q9H4I8 314 aa3.32□□□□□ -1.88
PTPN11-203ENST00000530818 WDCPQ9H6R7 721 aa3.32□□□□□ -1.88
PTPN11-203ENST00000530818 BRD9Q9H8M2 597 aa3.32□□□□□ -1.88
PTPN11-203ENST00000530818 UNKLQ9H9P5 680 aaKnown RBP3.32□□□□□ -1.88
PTPN11-203ENST00000530818 ALG13Q9NP73 1137 aaKnown RBP3.32□□□□□ -1.88
PTPN11-203ENST00000530818 SLAMF7Q9NQ25 335 aa3.32□□□□□ -1.88
PTPN11-203ENST00000530818 KMT5AQ9NQR1 393 aa3.32□□□□□ -1.88
PTPN11-203ENST00000530818 MAN1C1Q9NR34 630 aa3.32□□□□□ -1.88
PTPN11-203ENST00000530818 ETAA1Q9NY74 926 aa3.32□□□□□ -1.88
PTPN11-203ENST00000530818 SALL3Q9BXA9 1300 aa3.32□□□□□ -1.88
PTPN11-203ENST00000530818 KDM5BQ9UGL1 1544 aa3.32□□□□□ -1.88
PTPN11-203ENST00000530818 ABCA8O94911 1581 aa3.32□□□□□ -1.88
PTPN11-203ENST00000530818 FRMPD1Q5SYB0 1578 aa3.32□□□□□ -1.88
PTPN11-203ENST00000530818 RICTORQ6R327 1708 aa3.32□□□□□ -1.88
PTPN11-203ENST00000530818 FER1L4A9Z1Z3 1794 aa3.32□□□□□ -1.88
PTPN11-203ENST00000530818 STRCQ7RTU9 1775 aa3.31□□□□□ -1.88
PTPN11-203ENST00000530818 COL11A2P13942 1736 aaPredicted RBP3.31□□□□□ -1.88
PTPN11-203ENST00000530818 UGGT2Q9NYU1 1516 aa3.31□□□□□ -1.88
PTPN11-203ENST00000530818 RAPGEF2Q9Y4G8 1499 aa3.31□□□□□ -1.88
PTPN11-203ENST00000530818 AKAP8O43823 692 aaKnown RBP3.31□□□□□ -1.88
PTPN11-203ENST00000530818 DTNBO60941 627 aa3.31□□□□□ -1.88
PTPN11-203ENST00000530818 KIF20AO95235 890 aa3.31□□□□□ -1.88
PTPN11-203ENST00000530818 FSHBP01225 129 aa3.31□□□□□ -1.88
PTPN11-203ENST00000530818 HNRNPMP52272 730 aaKnown RBP eCLIP3.31□□□□□ -1.88
PTPN11-203ENST00000530818 HSPA2P54652 639 aa3.31□□□□□ -1.88
PTPN11-203ENST00000530818 MC2RQ01718 297 aa3.31□□□□□ -1.88
PTPN11-203ENST00000530818 FGL2Q14314 439 aa3.31□□□□□ -1.88
PTPN11-203ENST00000530818 GBX1Q14549 363 aa3.31□□□□□ -1.88
PTPN11-203ENST00000530818 ANO6Q4KMQ2 910 aa3.31□□□□□ -1.88
PTPN11-203ENST00000530818 KHDC1LQ5JSQ8 128 aa3.31□□□□□ -1.88
PTPN11-203ENST00000530818 EMC10Q5UCC4 262 aa3.31□□□□□ -1.88
PTPN11-203ENST00000530818 WDR75Q8IWA0 830 aaKnown RBP3.31□□□□□ -1.88
PTPN11-203ENST00000530818 FAM156AQ8NDB6 213 aa3.31□□□□□ -1.88
PTPN11-203ENST00000530818 IL31RAQ8NI17 732 aa3.31□□□□□ -1.88
PTPN11-203ENST00000530818 ANKS1AQ92625 1134 aa3.31□□□□□ -1.88
PTPN11-203ENST00000530818 SCAMP4Q969E2 229 aa3.31□□□□□ -1.88
PTPN11-203ENST00000530818 FAM167AQ96KS9 214 aa3.31□□□□□ -1.88
PTPN11-203ENST00000530818 FAM193BQ96PV7 902 aaPredicted RBP3.31□□□□□ -1.88
PTPN11-203ENST00000530818 P2RX7Q99572 595 aaKnown RBP3.31□□□□□ -1.88
PTPN11-203ENST00000530818 ALOXE3Q9BYJ1 711 aa3.31□□□□□ -1.88
PTPN11-203ENST00000530818 C22orf23Q9BZE7 217 aa3.31□□□□□ -1.88
PTPN11-203ENST00000530818 PCED1AQ9H1Q7 454 aa3.31□□□□□ -1.88
PTPN11-203ENST00000530818 BHMT2Q9H2M3 363 aa3.31□□□□□ -1.88
PTPN11-203ENST00000530818 SMOC2Q9H3U7 446 aa3.31□□□□□ -1.88
PTPN11-203ENST00000530818 RNPEPQ9H4A4 650 aa3.31□□□□□ -1.88
PTPN11-203ENST00000530818 RSAD1Q9HA92 442 aa3.31□□□□□ -1.88
PTPN11-203ENST00000530818 C1orf112Q9NSG2 853 aa3.31□□□□□ -1.88
PTPN11-203ENST00000530818 SYBUQ9NX95 663 aa3.31□□□□□ -1.88
PTPN11-203ENST00000530818 ZDHHC8Q9ULC8 765 aa3.31□□□□□ -1.88
PTPN11-203ENST00000530818 REXO2Q9Y3B8 237 aaKnown RBP3.31□□□□□ -1.88
PTPN11-203ENST00000530818 RAPGEF6Q8TEU7 1601 aa3.3□□□□□ -1.88
PTPN11-203ENST00000530818 UHRF1BP1LA0JNW5 1464 aa3.3□□□□□ -1.88
PTPN11-203ENST00000530818 WDR7Q9Y4E6 1490 aa3.3□□□□□ -1.88
PTPN11-203ENST00000530818 CD109Q6YHK3 1445 aa3.3□□□□□ -1.88
PTPN11-203ENST00000530818 PIPSLA2A3N6 862 aa3.3□□□□□ -1.88
PTPN11-203ENST00000530818 GRID2IPA4D2P6 1211 aa3.3□□□□□ -1.88
PTPN11-203ENST00000530818 MYADML2A6NDP7 307 aa3.3□□□□□ -1.88
PTPN11-203ENST00000530818 ZNF785A8K8V0 405 aa3.3□□□□□ -1.88
PTPN11-203ENST00000530818 MYO1FO00160 1098 aa3.3□□□□□ -1.88
PTPN11-203ENST00000530818 DCLK1O15075 740 aa3.3□□□□□ -1.88
PTPN11-203ENST00000530818 FZD7O75084 574 aa3.3□□□□□ -1.88
PTPN11-203ENST00000530818 ZNF202O95125 648 aa3.3□□□□□ -1.88
PTPN11-203ENST00000530818 KITP10721 976 aa3.3□□□□□ -1.88
PTPN11-203ENST00000530818 RARBP10826 455 aa3.3□□□□□ -1.88
PTPN11-203ENST00000530818 DDX6P26196 483 aaKnown RBP eCLIP3.3□□□□□ -1.88
PTPN11-203ENST00000530818 ZNF135P52742 658 aaPredicted RBP3.3□□□□□ -1.88
PTPN11-203ENST00000530818 SOX8P57073 446 aa3.3□□□□□ -1.88
PTPN11-203ENST00000530818 POU6F2P78424 691 aaPredicted RBP3.3□□□□□ -1.88
PTPN11-203ENST00000530818 FOXI1Q12951 378 aa3.3□□□□□ -1.88
PTPN11-203ENST00000530818 DYRK1AQ13627 763 aa3.3□□□□□ -1.88
PTPN11-203ENST00000530818 ATP2B3Q16720 1220 aa3.3□□□□□ -1.88
PTPN11-203ENST00000530818 GEN1Q17RS7 908 aa3.3□□□□□ -1.88
PTPN11-203ENST00000530818 CD300EQ496F6 205 aaPredicted RBP3.3□□□□□ -1.88
PTPN11-203ENST00000530818 TIGD2Q4W5G0 525 aa3.3□□□□□ -1.88
PTPN11-203ENST00000530818 APOA5Q6Q788 366 aa3.3□□□□□ -1.88
PTPN11-203ENST00000530818 SLC30A10Q6XR72 485 aa3.3□□□□□ -1.88
PTPN11-203ENST00000530818 MAEAQ7L5Y9 396 aa3.3□□□□□ -1.88
PTPN11-203ENST00000530818 LDLRAD3Q86YD5 345 aa3.3□□□□□ -1.88
PTPN11-203ENST00000530818 FAM43AQ8N2R8 423 aa3.3□□□□□ -1.88
PTPN11-203ENST00000530818 PROKR1Q8TCW9 393 aa3.3□□□□□ -1.88
PTPN11-203ENST00000530818 MAML1Q92585 1016 aa3.3□□□□□ -1.88
PTPN11-203ENST00000530818 SMURF2Q9HAU4 748 aa3.3□□□□□ -1.88
PTPN11-203ENST00000530818 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.3□□□□□ -1.88
PTPN11-203ENST00000530818 RLIMQ9NVW2 624 aa3.3□□□□□ -1.88
PTPN11-203ENST00000530818 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.3□□□□□ -1.88
PTPN11-203ENST00000530818 CPA4Q9UI42 421 aa3.3□□□□□ -1.88
PTPN11-203ENST00000530818 KCNE5Q9UJ90 142 aa3.3□□□□□ -1.88
PTPN11-203ENST00000530818 CDYLQ9Y232 598 aa3.3□□□□□ -1.88
PTPN11-203ENST00000530818 EPN1Q9Y6I3 576 aaPredicted RBP3.3□□□□□ -1.88
PTPN11-203ENST00000530818 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.3□□□□□ -1.88
PTPN11-203ENST00000530818 FNDC1Q4ZHG4 1894 aaPredicted RBP3.3□□□□□ -1.88
PTPN11-203ENST00000530818 SUPT6HQ7KZ85 1726 aaKnown RBP3.3□□□□□ -1.88
PTPN11-203ENST00000530818 TTC37Q6PGP7 1564 aa3.29□□□□□ -1.88
PTPN11-203ENST00000530818 ATP10BO94823 1461 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms