RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 GEN1Q17RS7 908 aa4.84□□□□□ -1.63
CD46-218ENST00000496723 MICALCLQ6ZW33 695 aa4.84□□□□□ -1.63
CD46-218ENST00000496723 EPM2AIP1Q7L775 607 aaPredicted RBP4.84□□□□□ -1.63
CD46-218ENST00000496723 PPP1R3BQ86XI6 285 aa4.84□□□□□ -1.63
CD46-218ENST00000496723 CFAP52Q8N1V2 620 aa4.84□□□□□ -1.63
CD46-218ENST00000496723 Q8NA96 180 aa4.84□□□□□ -1.63
CD46-218ENST00000496723 ANKS1AQ92625 1134 aa4.84□□□□□ -1.63
CD46-218ENST00000496723 SCAMP4Q969E2 229 aa4.84□□□□□ -1.63
CD46-218ENST00000496723 SLC35A4Q96G79 324 aa4.84□□□□□ -1.63
CD46-218ENST00000496723 CDK5RAP3Q96JB5 506 aa4.84□□□□□ -1.63
CD46-218ENST00000496723 FAM167AQ96KS9 214 aa4.84□□□□□ -1.63
CD46-218ENST00000496723 CGRRF1Q99675 332 aa4.84□□□□□ -1.63
CD46-218ENST00000496723 UNKLQ9H9P5 680 aaKnown RBP4.84□□□□□ -1.63
CD46-218ENST00000496723 KIAA1586Q9HCI6 787 aa4.84□□□□□ -1.63
CD46-218ENST00000496723 TBCCD1Q9NVR7 557 aa4.84□□□□□ -1.63
CD46-218ENST00000496723 PNPOQ9NVS9 261 aa4.84□□□□□ -1.63
CD46-218ENST00000496723 RLIMQ9NVW2 624 aa4.84□□□□□ -1.63
CD46-218ENST00000496723 NOB1Q9ULX3 412 aaKnown RBP4.84□□□□□ -1.63
CD46-218ENST00000496723 G3BP2Q9UN86 482 aaKnown RBP4.84□□□□□ -1.63
CD46-218ENST00000496723 PCDHA1Q9Y5I3 950 aa4.84□□□□□ -1.63
CD46-218ENST00000496723 E9PLN8 166 aa4.83□□□□□ -1.64
CD46-218ENST00000496723 PROP1O75360 226 aa4.83□□□□□ -1.64
CD46-218ENST00000496723 MATN4O95460 622 aa4.83□□□□□ -1.64
CD46-218ENST00000496723 SCGB1D2O95969 90 aa4.83□□□□□ -1.64
CD46-218ENST00000496723 AHSGP02765 367 aa4.83□□□□□ -1.64
CD46-218ENST00000496723 KCNA2P16389 499 aa4.83□□□□□ -1.64
CD46-218ENST00000496723 LPOP22079 712 aaPredicted RBP4.83□□□□□ -1.64
CD46-218ENST00000496723 ZNF135P52742 658 aaPredicted RBP4.83□□□□□ -1.64
CD46-218ENST00000496723 CACNA2D1P54289 1103 aa4.83□□□□□ -1.64
CD46-218ENST00000496723 NKX6-1P78426 367 aaPredicted RBP4.83□□□□□ -1.64
CD46-218ENST00000496723 FOXF2Q12947 444 aa4.83□□□□□ -1.64
CD46-218ENST00000496723 KIF22Q14807 665 aa4.83□□□□□ -1.64
CD46-218ENST00000496723 PPP2R5AQ15172 486 aa4.83□□□□□ -1.64
CD46-218ENST00000496723 NFE2Q16621 373 aaPredicted RBP4.83□□□□□ -1.64
CD46-218ENST00000496723 Q6ZNX1 250 aa4.83□□□□□ -1.64
CD46-218ENST00000496723 CLNKQ7Z7G1 428 aa4.83□□□□□ -1.64
CD46-218ENST00000496723 SRRM1Q8IYB3 904 aaKnown RBP4.83□□□□□ -1.64
CD46-218ENST00000496723 CHPFQ8IZ52 775 aa4.83□□□□□ -1.64
CD46-218ENST00000496723 SLC35G2Q8TBE7 412 aa4.83□□□□□ -1.64
CD46-218ENST00000496723 TMEM125Q96AQ2 219 aa4.83□□□□□ -1.64
CD46-218ENST00000496723 PTCD3Q96EY7 689 aaKnown RBP4.83□□□□□ -1.64
CD46-218ENST00000496723 Q96MF0 132 aa4.83□□□□□ -1.64
CD46-218ENST00000496723 TRIB1Q96RU8 372 aa4.83□□□□□ -1.64
CD46-218ENST00000496723 VKORC1Q9BQB6 163 aa4.83□□□□□ -1.64
CD46-218ENST00000496723 ANLNQ9NQW6 1124 aa4.83□□□□□ -1.64
CD46-218ENST00000496723 CTTNBP2NLQ9P2B4 639 aa4.83□□□□□ -1.64
CD46-218ENST00000496723 TCEAL9Q9UHQ7 104 aa4.83□□□□□ -1.64
CD46-218ENST00000496723 STXBP5LQ9Y2K9 1186 aa4.83□□□□□ -1.64
CD46-218ENST00000496723 SALL3Q9BXA9 1300 aa4.82□□□□□ -1.64
CD46-218ENST00000496723 TRGV11A0A075B6L2 103 aa4.82□□□□□ -1.64
CD46-218ENST00000496723 PRAMEF33A0A0G2JMD5 474 aa4.82□□□□□ -1.64
CD46-218ENST00000496723 CCDC195A0A1B0GUA6 201 aa4.82□□□□□ -1.64
CD46-218ENST00000496723 A0A1W2PS29 197 aa4.82□□□□□ -1.64
CD46-218ENST00000496723 POLRMTO00411 1230 aaKnown RBP4.82□□□□□ -1.64
CD46-218ENST00000496723 TOR1BO14657 336 aa4.82□□□□□ -1.64
CD46-218ENST00000496723 PPM1GO15355 546 aaPredicted RBP4.82□□□□□ -1.64
CD46-218ENST00000496723 PRPF3O43395 683 aaKnown RBP4.82□□□□□ -1.64
CD46-218ENST00000496723 PRAMEF10O60809 474 aa4.82□□□□□ -1.64
CD46-218ENST00000496723 RBMXL2O75526 392 aaKnown RBP4.82□□□□□ -1.64
CD46-218ENST00000496723 RARBP10826 455 aa4.82□□□□□ -1.64
CD46-218ENST00000496723 POU6F2P78424 691 aaPredicted RBP4.82□□□□□ -1.64
CD46-218ENST00000496723 FPGSQ05932 587 aa4.82□□□□□ -1.64
CD46-218ENST00000496723 CD300EQ496F6 205 aaPredicted RBP4.82□□□□□ -1.64
CD46-218ENST00000496723 PREPLQ4J6C6 727 aaPredicted RBP4.82□□□□□ -1.64
CD46-218ENST00000496723 TAPT1Q6NXT6 567 aa4.82□□□□□ -1.64
CD46-218ENST00000496723 B3GNT9Q6UX72 402 aa4.82□□□□□ -1.64
CD46-218ENST00000496723 SLC30A10Q6XR72 485 aa4.82□□□□□ -1.64
CD46-218ENST00000496723 DENND1CQ8IV53 801 aa4.82□□□□□ -1.64
CD46-218ENST00000496723 KLHDC4Q8TBB5 520 aa4.82□□□□□ -1.64
CD46-218ENST00000496723 BRIX1Q8TDN6 353 aaKnown RBP4.82□□□□□ -1.64
CD46-218ENST00000496723 LRIG1Q96JA1 1093 aa4.82□□□□□ -1.64
CD46-218ENST00000496723 TAAR9Q96RI9 348 aa4.82□□□□□ -1.64
CD46-218ENST00000496723 ACO2Q99798 780 aaKnown RBP4.82□□□□□ -1.64
CD46-218ENST00000496723 SMOQ99835 787 aa4.82□□□□□ -1.64
CD46-218ENST00000496723 ARMT1Q9H993 441 aa4.82□□□□□ -1.64
CD46-218ENST00000496723 GPR35Q9HC97 309 aa4.82□□□□□ -1.64
CD46-218ENST00000496723 CASS4Q9NQ75 786 aa4.82□□□□□ -1.64
CD46-218ENST00000496723 ZDHHC8Q9ULC8 765 aa4.82□□□□□ -1.64
CD46-218ENST00000496723 NEU2Q9Y3R4 380 aa4.82□□□□□ -1.64
CD46-218ENST00000496723 ARHGEF17Q96PE2 2063 aaPredicted RBP4.81□□□□□ -1.64
CD46-218ENST00000496723 PROB1E7EW31 1015 aa4.81□□□□□ -1.64
CD46-218ENST00000496723 H3BML4 177 aa4.81□□□□□ -1.64
CD46-218ENST00000496723 UBXN7O94888 489 aa4.81□□□□□ -1.64
CD46-218ENST00000496723 SUN1O94901 812 aa4.81□□□□□ -1.64
CD46-218ENST00000496723 CHEK2O96017 543 aa4.81□□□□□ -1.64
CD46-218ENST00000496723 GNAI2P04899 355 aa4.81□□□□□ -1.64
CD46-218ENST00000496723 MYBP10242 640 aa4.81□□□□□ -1.64
CD46-218ENST00000496723 RPS7P62081 194 aaKnown RBP4.81□□□□□ -1.64
CD46-218ENST00000496723 MC2RQ01718 297 aa4.81□□□□□ -1.64
CD46-218ENST00000496723 EXOSC9Q06265 439 aaKnown RBP4.81□□□□□ -1.64
CD46-218ENST00000496723 DYRK1AQ13627 763 aa4.81□□□□□ -1.64
CD46-218ENST00000496723 HABP2Q14520 560 aaPredicted RBP4.81□□□□□ -1.64
CD46-218ENST00000496723 FAM102BQ5T8I3 360 aa4.81□□□□□ -1.64
CD46-218ENST00000496723 SP5Q6BEB4 398 aaPredicted RBP4.81□□□□□ -1.64
CD46-218ENST00000496723 CXorf57Q6NSI4 855 aaKnown RBP4.81□□□□□ -1.64
CD46-218ENST00000496723 BHLHA9Q7RTU4 235 aa4.81□□□□□ -1.64
CD46-218ENST00000496723 PLBD2Q8NHP8 589 aa4.81□□□□□ -1.64
CD46-218ENST00000496723 PPP1R35Q8TAP8 253 aa4.81□□□□□ -1.64
CD46-218ENST00000496723 ZNF384Q8TF68 577 aa4.81□□□□□ -1.64
CD46-218ENST00000496723 MTFMTQ96DP5 389 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms