RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 TNMDQ9H2S6 317 aa23.34■■□□□ 1.33
C9orf3-208ENST00000451893 IKZF4Q9H2S9 585 aa23.34■■□□□ 1.33
C9orf3-208ENST00000451893 CUEDC2Q9H467 287 aa23.34■■□□□ 1.33
C9orf3-208ENST00000451893 GOLPH3LQ9H4A5 285 aa23.34■■□□□ 1.33
C9orf3-208ENST00000451893 BRD9Q9H8M2 597 aa23.34■■□□□ 1.33
C9orf3-208ENST00000451893 CEP72Q9P209 647 aa23.34■■□□□ 1.33
C9orf3-208ENST00000451893 A0A1B0GVL5 298 aa23.33■■□□□ 1.33
C9orf3-208ENST00000451893 PIRO00625 290 aa23.33■■□□□ 1.33
C9orf3-208ENST00000451893 PPP1R37O75864 691 aa23.33■■□□□ 1.33
C9orf3-208ENST00000451893 MICAL2O94851 1124 aa23.33■■□□□ 1.33
C9orf3-208ENST00000451893 PFKFB1P16118 471 aa23.33■■□□□ 1.33
C9orf3-208ENST00000451893 GARTP22102 1010 aa23.33■■□□□ 1.33
C9orf3-208ENST00000451893 PNPLA4P41247 253 aa23.33■■□□□ 1.33
C9orf3-208ENST00000451893 SYKP43405 635 aa23.33■■□□□ 1.33
C9orf3-208ENST00000451893 KCNA1Q09470 495 aa23.33■■□□□ 1.33
C9orf3-208ENST00000451893 MGAT5BQ3V5L5 792 aa23.33■■□□□ 1.33
C9orf3-208ENST00000451893 SLC39A12Q504Y0 691 aa23.33■■□□□ 1.33
C9orf3-208ENST00000451893 LRSAM1Q6UWE0 723 aa23.33■■□□□ 1.33
C9orf3-208ENST00000451893 ITIH5Q86UX2 942 aa23.33■■□□□ 1.33
C9orf3-208ENST00000451893 IQUBQ8NA54 791 aa23.33■■□□□ 1.33
C9orf3-208ENST00000451893 PJA1Q8NG27 643 aa23.33■■□□□ 1.33
C9orf3-208ENST00000451893 CCDC34Q96HJ3 373 aa23.33■■□□□ 1.33
C9orf3-208ENST00000451893 BCO2Q9BYV7 579 aa23.33■■□□□ 1.33
C9orf3-208ENST00000451893 SLC27A5Q9Y2P5 690 aa23.33■■□□□ 1.33
C9orf3-208ENST00000451893 A0A087X0B3 334 aa23.32■■□□□ 1.32
C9orf3-208ENST00000451893 KANSL1LA0AUZ9 987 aa23.32■■□□□ 1.32
C9orf3-208ENST00000451893 MTMR11A4FU01 709 aa23.32■■□□□ 1.32
C9orf3-208ENST00000451893 GOLGA8IPA6NC78 632 aa23.32■■□□□ 1.32
C9orf3-208ENST00000451893 GOLGA8JA6NMD2 632 aa23.32■■□□□ 1.32
C9orf3-208ENST00000451893 PRPF6O94906 941 aaKnown RBP23.32■■□□□ 1.32
C9orf3-208ENST00000451893 KRT19P08727 400 aa23.32■■□□□ 1.32
C9orf3-208ENST00000451893 TMEM191BP0C7N4 346 aa23.32■■□□□ 1.32
C9orf3-208ENST00000451893 GJA1P17302 382 aa23.32■■□□□ 1.32
C9orf3-208ENST00000451893 NDUFA8P51970 172 aa23.32■■□□□ 1.32
C9orf3-208ENST00000451893 GRM2Q14416 872 aa23.32■■□□□ 1.32
C9orf3-208ENST00000451893 TANGO2Q6ICL3 276 aa23.32■■□□□ 1.32
C9orf3-208ENST00000451893 RBM43Q6ZSC3 357 aaKnown RBP23.32■■□□□ 1.32
C9orf3-208ENST00000451893 TPRG1Q6ZUI0 275 aa23.32■■□□□ 1.32
C9orf3-208ENST00000451893 YAF2Q8IY57 180 aa23.32■■□□□ 1.32
C9orf3-208ENST00000451893 NKD2Q969F2 451 aaPredicted RBP23.32■■□□□ 1.32
C9orf3-208ENST00000451893 GCNAQ96QF7 691 aa23.32■■□□□ 1.32
C9orf3-208ENST00000451893 GPR88Q9GZN0 384 aa23.32■■□□□ 1.32
C9orf3-208ENST00000451893 PCIF1Q9H4Z3 704 aa23.32■■□□□ 1.32
C9orf3-208ENST00000451893 USP25Q9UHP3 1055 aa23.32■■□□□ 1.32
C9orf3-208ENST00000451893 CACNA1HO95180 2353 aa23.32■■□□□ 1.32
C9orf3-208ENST00000451893 TSC2P49815 1807 aa23.31■■□□□ 1.32
C9orf3-208ENST00000451893 ANO9A1A5B4 782 aa23.31■■□□□ 1.32
C9orf3-208ENST00000451893 SPTLC1O15269 473 aa23.31■■□□□ 1.32
C9orf3-208ENST00000451893 ZNF202O95125 648 aa23.31■■□□□ 1.32
C9orf3-208ENST00000451893 ADSSP30520 456 aa23.31■■□□□ 1.32
C9orf3-208ENST00000451893 TUFMP49411 452 aaKnown RBP23.31■■□□□ 1.32
C9orf3-208ENST00000451893 CASP5P51878 434 aa23.31■■□□□ 1.32
C9orf3-208ENST00000451893 STARD6P59095 220 aa23.31■■□□□ 1.32
C9orf3-208ENST00000451893 TEAD2Q15562 447 aa23.31■■□□□ 1.32
C9orf3-208ENST00000451893 ARHGAP15Q53QZ3 475 aa23.31■■□□□ 1.32
C9orf3-208ENST00000451893 FAM78AQ5JUQ0 283 aa23.31■■□□□ 1.32
C9orf3-208ENST00000451893 FRMD5Q7Z6J6 570 aa23.31■■□□□ 1.32
C9orf3-208ENST00000451893 BRSK2Q8IWQ3 736 aa23.31■■□□□ 1.32
C9orf3-208ENST00000451893 EFCAB13Q8IY85 973 aa23.31■■□□□ 1.32
C9orf3-208ENST00000451893 ATAD1Q8NBU5 361 aa23.31■■□□□ 1.32
C9orf3-208ENST00000451893 ZSCAN18Q8TBC5 510 aaPredicted RBP23.31■■□□□ 1.32
C9orf3-208ENST00000451893 SMARCD2Q92925 531 aa23.31■■□□□ 1.32
C9orf3-208ENST00000451893 TRMT61BQ9BVS5 477 aaKnown RBP23.31■■□□□ 1.32
C9orf3-208ENST00000451893 HOOK1Q9UJC3 728 aaKnown RBP23.31■■□□□ 1.32
C9orf3-208ENST00000451893 MRPS17Q9Y2R5 130 aaKnown RBP23.31■■□□□ 1.32
C9orf3-208ENST00000451893 ASB3Q9Y575 518 aa23.31■■□□□ 1.32
C9orf3-208ENST00000451893 A0A1W2PRU2 124 aa23.3■■□□□ 1.32
C9orf3-208ENST00000451893 KPNA7A9QM74 516 aa23.3■■□□□ 1.32
C9orf3-208ENST00000451893 DPYSL4O14531 572 aa23.3■■□□□ 1.32
C9orf3-208ENST00000451893 NCAM2O15394 837 aa23.3■■□□□ 1.32
C9orf3-208ENST00000451893 EXTL3O43909 919 aa23.3■■□□□ 1.32
C9orf3-208ENST00000451893 FGF19O95750 216 aa23.3■■□□□ 1.32
C9orf3-208ENST00000451893 ITGB3P05106 788 aa23.3■■□□□ 1.32
C9orf3-208ENST00000451893 POLR2BP30876 1174 aaKnown RBP23.3■■□□□ 1.32
C9orf3-208ENST00000451893 NBL1P41271 181 aa23.3■■□□□ 1.32
C9orf3-208ENST00000451893 CCR2P41597 374 aa23.3■■□□□ 1.32
C9orf3-208ENST00000451893 TSPY1Q01534 308 aa23.3■■□□□ 1.32
C9orf3-208ENST00000451893 BFSP1Q12934 665 aa23.3■■□□□ 1.32
C9orf3-208ENST00000451893 CENPPQ6IPU0 288 aa23.3■■□□□ 1.32
C9orf3-208ENST00000451893 CRELD2Q6UXH1 353 aaPredicted RBP23.3■■□□□ 1.32
C9orf3-208ENST00000451893 DCP1BQ8IZD4 617 aaKnown RBP23.3■■□□□ 1.32
C9orf3-208ENST00000451893 GPD1LQ8N335 351 aa23.3■■□□□ 1.32
C9orf3-208ENST00000451893 ANKRD36BP1Q96IX9 119 aa23.3■■□□□ 1.32
C9orf3-208ENST00000451893 ASB16Q96NS5 453 aa23.3■■□□□ 1.32
C9orf3-208ENST00000451893 TMEM209Q96SK2 561 aa23.3■■□□□ 1.32
C9orf3-208ENST00000451893 AGAP1Q9UPQ3 857 aa23.3■■□□□ 1.32
C9orf3-208ENST00000451893 SYCE3A1L190 88 aa23.29■■□□□ 1.32
C9orf3-208ENST00000451893 FRMD3A2A2Y4 597 aa23.29■■□□□ 1.32
C9orf3-208ENST00000451893 KIAA0391O15091 583 aaKnown RBP23.29■■□□□ 1.32
C9orf3-208ENST00000451893 HUS1O60921 280 aa23.29■■□□□ 1.32
C9orf3-208ENST00000451893 CYP11A1P05108 521 aa23.29■■□□□ 1.32
C9orf3-208ENST00000451893 ZNF852Q6ZMS4 543 aa23.29■■□□□ 1.32
C9orf3-208ENST00000451893 CSGALNACT2Q8N6G5 542 aa23.29■■□□□ 1.32
C9orf3-208ENST00000451893 DEPDC1BQ8WUY9 529 aa23.29■■□□□ 1.32
C9orf3-208ENST00000451893 DNASE1L2Q92874 299 aa23.29■■□□□ 1.32
C9orf3-208ENST00000451893 IRF7Q92985 503 aa23.29■■□□□ 1.32
C9orf3-208ENST00000451893 CBWD1Q9BRT8 395 aa23.29■■□□□ 1.32
C9orf3-208ENST00000451893 STRA6Q9BX79 667 aa23.29■■□□□ 1.32
C9orf3-208ENST00000451893 PLA2G2FQ9BZM2 168 aa23.29■■□□□ 1.32
C9orf3-208ENST00000451893 ATXN3LQ9H3M9 355 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms