RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 SPOUT1Q5T280 376 aaKnown RBP10.17□□□□□ -0.78
HMGCLL1-206ENST00000428842 CPNE8Q86YQ8 564 aa10.17□□□□□ -0.78
HMGCLL1-206ENST00000428842 CNGA4Q8IV77 575 aa10.17□□□□□ -0.78
HMGCLL1-206ENST00000428842 TMEM199Q8N511 208 aa10.17□□□□□ -0.78
HMGCLL1-206ENST00000428842 CCDC150Q8NCX0 1101 aa10.17□□□□□ -0.78
HMGCLL1-206ENST00000428842 CCDC112Q8NEF3 446 aa10.17□□□□□ -0.78
HMGCLL1-206ENST00000428842 UBA3Q8TBC4 463 aa10.17□□□□□ -0.78
HMGCLL1-206ENST00000428842 EPS8L1Q8TE68 723 aa10.17□□□□□ -0.78
HMGCLL1-206ENST00000428842 SHC3Q92529 594 aa10.17□□□□□ -0.78
HMGCLL1-206ENST00000428842 NIF3L1Q9GZT8 377 aa10.17□□□□□ -0.78
HMGCLL1-206ENST00000428842 ZMYND15Q9H091 742 aa10.17□□□□□ -0.78
HMGCLL1-206ENST00000428842 TMEM161AQ9NX61 479 aa10.17□□□□□ -0.78
HMGCLL1-206ENST00000428842 SALL4Q9UJQ4 1053 aa10.17□□□□□ -0.78
HMGCLL1-206ENST00000428842 GIT1Q9Y2X7 761 aa10.17□□□□□ -0.78
HMGCLL1-206ENST00000428842 CYB561D2O14569 222 aa10.17□□□□□ -0.78
HMGCLL1-206ENST00000428842 SOAT2O75908 522 aa10.17□□□□□ -0.78
HMGCLL1-206ENST00000428842 SCP2P22307 547 aa10.17□□□□□ -0.78
HMGCLL1-206ENST00000428842 TKTP29401 623 aaKnown RBP10.17□□□□□ -0.78
HMGCLL1-206ENST00000428842 MAGEA10P43363 369 aaPredicted RBP10.17□□□□□ -0.78
HMGCLL1-206ENST00000428842 CACNA2D1P54289 1103 aa10.17□□□□□ -0.78
HMGCLL1-206ENST00000428842 ARPP19P56211 112 aa10.17□□□□□ -0.78
HMGCLL1-206ENST00000428842 PCBP1Q15365 356 aaKnown RBP eCLIP10.17□□□□□ -0.78
HMGCLL1-206ENST00000428842 SHHQ15465 462 aa10.17□□□□□ -0.78
HMGCLL1-206ENST00000428842 PTPN14Q15678 1187 aa10.17□□□□□ -0.78
HMGCLL1-206ENST00000428842 CNKSR3Q6P9H4 555 aa10.17□□□□□ -0.78
HMGCLL1-206ENST00000428842 RSPO2Q6UXX9 243 aaPredicted RBP10.17□□□□□ -0.78
HMGCLL1-206ENST00000428842 USP37Q86T82 979 aa10.17□□□□□ -0.78
HMGCLL1-206ENST00000428842 COLGALT2Q8IYK4 626 aa10.17□□□□□ -0.78
HMGCLL1-206ENST00000428842 RPUSD2Q8IZ73 545 aaKnown RBP10.17□□□□□ -0.78
HMGCLL1-206ENST00000428842 GPR152Q8TDT2 470 aa10.17□□□□□ -0.78
HMGCLL1-206ENST00000428842 NDRG1Q92597 394 aaKnown RBP10.17□□□□□ -0.78
HMGCLL1-206ENST00000428842 TOP1MTQ969P6 601 aa10.17□□□□□ -0.78
HMGCLL1-206ENST00000428842 SENP8Q96LD8 212 aa10.17□□□□□ -0.78
HMGCLL1-206ENST00000428842 PGLYRP2Q96PD5 576 aa10.17□□□□□ -0.78
HMGCLL1-206ENST00000428842 VN1R3Q9BXE9 311 aa10.17□□□□□ -0.78
HMGCLL1-206ENST00000428842 IMPG2Q9BZV3 1241 aa10.17□□□□□ -0.78
HMGCLL1-206ENST00000428842 PLEKHA5Q9HAU0 1116 aa10.17□□□□□ -0.78
HMGCLL1-206ENST00000428842 CYTH4Q9UIA0 394 aa10.17□□□□□ -0.78
HMGCLL1-206ENST00000428842 ITGA11Q9UKX5 1188 aa10.17□□□□□ -0.78
HMGCLL1-206ENST00000428842 LTBP2Q14767 1821 aa10.17□□□□□ -0.78
HMGCLL1-206ENST00000428842 FANCGO15287 622 aa10.16□□□□□ -0.78
HMGCLL1-206ENST00000428842 DGKIO75912 1065 aa10.16□□□□□ -0.78
HMGCLL1-206ENST00000428842 TPM1P09493 284 aa10.16□□□□□ -0.78
HMGCLL1-206ENST00000428842 CYP11B1P15538 503 aa10.16□□□□□ -0.78
HMGCLL1-206ENST00000428842 KIF11P52732 1056 aa10.16□□□□□ -0.78
HMGCLL1-206ENST00000428842 RAD23BP54727 409 aa10.16□□□□□ -0.78
HMGCLL1-206ENST00000428842 MFAP3P55082 362 aa10.16□□□□□ -0.78
HMGCLL1-206ENST00000428842 TNNC1P63316 161 aa10.16□□□□□ -0.78
HMGCLL1-206ENST00000428842 PRSS55Q6UWB4 352 aaPredicted RBP10.16□□□□□ -0.78
HMGCLL1-206ENST00000428842 FAM71AQ8IYT1 594 aa10.16□□□□□ -0.78
HMGCLL1-206ENST00000428842 TTC9BQ8N6N2 239 aa10.16□□□□□ -0.78
HMGCLL1-206ENST00000428842 CYFIP2Q96F07 1278 aa10.16□□□□□ -0.78
HMGCLL1-206ENST00000428842 TMLHEQ9NVH6 421 aa10.16□□□□□ -0.78
HMGCLL1-206ENST00000428842 NOCTQ9UK39 431 aaKnown RBP10.16□□□□□ -0.78
HMGCLL1-206ENST00000428842 GTF3C4Q9UKN8 822 aa10.16□□□□□ -0.78
HMGCLL1-206ENST00000428842 HYOU1Q9Y4L1 999 aa10.16□□□□□ -0.78
HMGCLL1-206ENST00000428842 MRPL42Q9Y6G3 142 aaKnown RBP10.16□□□□□ -0.78
HMGCLL1-206ENST00000428842 PRRC2BQ5JSZ5 2229 aaKnown RBP10.16□□□□□ -0.78
HMGCLL1-206ENST00000428842 GBF1Q92538 1859 aa10.16□□□□□ -0.78
HMGCLL1-206ENST00000428842 KIF2AO00139 706 aaPredicted RBP10.16□□□□□ -0.78
HMGCLL1-206ENST00000428842 ADAM12O43184 909 aa10.16□□□□□ -0.78
HMGCLL1-206ENST00000428842 THAP12O43422 761 aa10.16□□□□□ -0.78
HMGCLL1-206ENST00000428842 AKR1B10O60218 316 aa10.16□□□□□ -0.78
HMGCLL1-206ENST00000428842 STX10O60499 249 aa10.16□□□□□ -0.78
HMGCLL1-206ENST00000428842 N4BP1O75113 896 aaKnown RBP10.16□□□□□ -0.78
HMGCLL1-206ENST00000428842 BEST1O76090 585 aa10.16□□□□□ -0.78
HMGCLL1-206ENST00000428842 FGBP02675 491 aa10.16□□□□□ -0.78
HMGCLL1-206ENST00000428842 ADORA2BP29275 332 aa10.16□□□□□ -0.78
HMGCLL1-206ENST00000428842 MCCD1P59942 119 aaPredicted RBP10.16□□□□□ -0.78
HMGCLL1-206ENST00000428842 SDHAF4Q5VUM1 108 aa10.16□□□□□ -0.78
HMGCLL1-206ENST00000428842 SLC4A11Q8NBS3 891 aa10.16□□□□□ -0.78
HMGCLL1-206ENST00000428842 ZNF397Q8NF99 534 aaPredicted RBP10.16□□□□□ -0.78
HMGCLL1-206ENST00000428842 DDX1Q92499 740 aaKnown RBP10.16□□□□□ -0.78
HMGCLL1-206ENST00000428842 CCDC51Q96ER9 411 aa10.16□□□□□ -0.78
HMGCLL1-206ENST00000428842 CCDC42Q96M95 316 aa10.16□□□□□ -0.78
HMGCLL1-206ENST00000428842 PANX2Q96RD6 677 aa10.16□□□□□ -0.78
HMGCLL1-206ENST00000428842 YME1L1Q96TA2 773 aa10.16□□□□□ -0.78
HMGCLL1-206ENST00000428842 RTP3Q9BQQ7 232 aa10.16□□□□□ -0.78
HMGCLL1-206ENST00000428842 FTHL17Q9BXU8 183 aa10.16□□□□□ -0.78
HMGCLL1-206ENST00000428842 TRIM7Q9C029 511 aa10.16□□□□□ -0.78
HMGCLL1-206ENST00000428842 DEF6Q9H4E7 631 aa10.16□□□□□ -0.78
HMGCLL1-206ENST00000428842 IL23AQ9NPF7 189 aa10.16□□□□□ -0.78
HMGCLL1-206ENST00000428842 MARCH5Q9NX47 278 aa10.16□□□□□ -0.78
HMGCLL1-206ENST00000428842 A0A1W2PQJ5 194 aa10.15□□□□□ -0.78
HMGCLL1-206ENST00000428842 MYBPHLA2RUH7 354 aa10.15□□□□□ -0.78
HMGCLL1-206ENST00000428842 NDUFA10O95299 355 aa10.15□□□□□ -0.78
HMGCLL1-206ENST00000428842 GNA15P30679 374 aa10.15□□□□□ -0.78
HMGCLL1-206ENST00000428842 CA8P35219 290 aa10.15□□□□□ -0.78
HMGCLL1-206ENST00000428842 STAT1P42224 750 aa10.15□□□□□ -0.78
HMGCLL1-206ENST00000428842 RGS7P49802 495 aa10.15□□□□□ -0.78
HMGCLL1-206ENST00000428842 TAF6P49848 677 aa10.15□□□□□ -0.78
HMGCLL1-206ENST00000428842 RAB27AP51159 221 aa10.15□□□□□ -0.78
HMGCLL1-206ENST00000428842 FMO1Q01740 532 aa10.15□□□□□ -0.78
HMGCLL1-206ENST00000428842 TUSC3Q13454 348 aa10.15□□□□□ -0.78
HMGCLL1-206ENST00000428842 MEA1Q16626 185 aa10.15□□□□□ -0.78
HMGCLL1-206ENST00000428842 FIGNQ5HY92 759 aa10.15□□□□□ -0.78
HMGCLL1-206ENST00000428842 RTP2Q5QGT7 225 aa10.15□□□□□ -0.78
HMGCLL1-206ENST00000428842 PPP1R26Q5T8A7 1209 aaPredicted RBP10.15□□□□□ -0.78
HMGCLL1-206ENST00000428842 DSTYKQ6XUX3 929 aa10.15□□□□□ -0.78
HMGCLL1-206ENST00000428842 LRRTM3Q86VH5 581 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms