RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 MEI1Q5TIA1 1274 aa27.98■■■□□ 2.07
ATPAF1-202ENST00000371937 SLFN11Q7Z7L1 901 aa27.98■■■□□ 2.07
ATPAF1-202ENST00000371937 ECHDC2Q86YB7 292 aa27.98■■■□□ 2.07
ATPAF1-202ENST00000371937 PHF13Q86YI8 300 aaPredicted RBP27.98■■■□□ 2.07
ATPAF1-202ENST00000371937 MNS1Q8NEH6 495 aa27.98■■■□□ 2.07
ATPAF1-202ENST00000371937 ZSWIM1Q9BR11 485 aa27.98■■■□□ 2.07
ATPAF1-202ENST00000371937 TSPYL2Q9H2G4 693 aaPredicted RBP27.98■■■□□ 2.07
ATPAF1-202ENST00000371937 MTA2O94776 668 aa27.97■■■□□ 2.07
ATPAF1-202ENST00000371937 VDRP11473 427 aa27.97■■■□□ 2.07
ATPAF1-202ENST00000371937 SLC24A5Q71RS6 500 aa27.97■■■□□ 2.07
ATPAF1-202ENST00000371937 DAAM2Q86T65 1068 aa27.97■■■□□ 2.07
ATPAF1-202ENST00000371937 TWNKQ96RR1 684 aa27.97■■■□□ 2.07
ATPAF1-202ENST00000371937 TLR10Q9BXR5 811 aa27.97■■■□□ 2.07
ATPAF1-202ENST00000371937 AVENQ9NQS1 362 aaPredicted RBP27.97■■■□□ 2.07
ATPAF1-202ENST00000371937 CNOT8Q9UFF9 292 aaKnown RBP27.97■■■□□ 2.07
ATPAF1-202ENST00000371937 HMGXB4Q9UGU5 601 aa27.97■■■□□ 2.07
ATPAF1-202ENST00000371937 HYOU1Q9Y4L1 999 aa27.97■■■□□ 2.07
ATPAF1-202ENST00000371937 CEP350Q5VT06 3117 aa27.97■■■□□ 2.07
ATPAF1-202ENST00000371937 PQBP1O60828 265 aaKnown RBP27.97■■■□□ 2.07
ATPAF1-202ENST00000371937 FTCDO95954 541 aa27.97■■■□□ 2.07
ATPAF1-202ENST00000371937 TCP1P17987 556 aaKnown RBP27.97■■■□□ 2.07
ATPAF1-202ENST00000371937 LILRA4P59901 499 aa27.97■■■□□ 2.07
ATPAF1-202ENST00000371937 PKN2Q16513 984 aaKnown RBP27.97■■■□□ 2.07
ATPAF1-202ENST00000371937 MON1BQ7L1V2 547 aa27.97■■■□□ 2.07
ATPAF1-202ENST00000371937 UNC93AQ86WB7 457 aa27.97■■■□□ 2.07
ATPAF1-202ENST00000371937 HEXIM2Q96MH2 286 aaKnown RBP27.97■■■□□ 2.07
ATPAF1-202ENST00000371937 CARD6Q9BX69 1037 aa27.97■■■□□ 2.07
ATPAF1-202ENST00000371937 DNAI2Q9GZS0 605 aa27.97■■■□□ 2.07
ATPAF1-202ENST00000371937 LHX5Q9H2C1 402 aa27.97■■■□□ 2.07
ATPAF1-202ENST00000371937 COG5Q9UP83 839 aa27.97■■■□□ 2.07
ATPAF1-202ENST00000371937 EOMESO95936 686 aa27.96■■■□□ 2.07
ATPAF1-202ENST00000371937 CDH5P33151 784 aaPredicted RBP27.96■■■□□ 2.07
ATPAF1-202ENST00000371937 SCNN1GP51170 649 aa27.96■■■□□ 2.07
ATPAF1-202ENST00000371937 C1QBPQ07021 282 aaKnown RBP27.96■■■□□ 2.07
ATPAF1-202ENST00000371937 SOWAHAQ2M3V2 549 aa27.96■■■□□ 2.07
ATPAF1-202ENST00000371937 LIN9Q5TKA1 542 aa27.96■■■□□ 2.07
ATPAF1-202ENST00000371937 SLC39A5Q6ZMH5 540 aa27.96■■■□□ 2.07
ATPAF1-202ENST00000371937 ANKRD33Q7Z3H0 272 aa27.96■■■□□ 2.07
ATPAF1-202ENST00000371937 ZNF598Q86UK7 904 aaKnown RBP27.96■■■□□ 2.07
ATPAF1-202ENST00000371937 CEP112Q8N8E3 955 aa27.96■■■□□ 2.07
ATPAF1-202ENST00000371937 ADAM22Q9P0K1 906 aa27.96■■■□□ 2.07
ATPAF1-202ENST00000371937 CTIFO43310 598 aaKnown RBP27.95■■■□□ 2.07
ATPAF1-202ENST00000371937 SSTR3P32745 418 aaPredicted RBP27.95■■■□□ 2.07
ATPAF1-202ENST00000371937 RPL9P32969 192 aaKnown RBP27.95■■■□□ 2.07
ATPAF1-202ENST00000371937 SGO2Q562F6 1265 aa27.95■■■□□ 2.07
ATPAF1-202ENST00000371937 DPH6Q7L8W6 267 aa27.95■■■□□ 2.07
ATPAF1-202ENST00000371937 APPL2Q8NEU8 664 aa27.95■■■□□ 2.07
ATPAF1-202ENST00000371937 MRPL45Q9BRJ2 306 aaKnown RBP27.95■■■□□ 2.07
ATPAF1-202ENST00000371937 NUP85Q9BW27 656 aa27.95■■■□□ 2.07
ATPAF1-202ENST00000371937 MIOSQ9NXC5 875 aa27.95■■■□□ 2.07
ATPAF1-202ENST00000371937 C9IYK1 514 aa27.95■■■□□ 2.06
ATPAF1-202ENST00000371937 SPTLC1O15269 473 aa27.95■■■□□ 2.06
ATPAF1-202ENST00000371937 BUB1BO60566 1050 aaPredicted RBP27.95■■■□□ 2.06
ATPAF1-202ENST00000371937 HUS1O60921 280 aa27.95■■■□□ 2.06
ATPAF1-202ENST00000371937 HSPA8P11142 646 aaKnown RBP27.95■■■□□ 2.06
ATPAF1-202ENST00000371937 AFF1P51825 1210 aaKnown RBP27.95■■■□□ 2.06
ATPAF1-202ENST00000371937 PEX26Q7Z412 305 aa27.95■■■□□ 2.06
ATPAF1-202ENST00000371937 DCDC2CA8MYV0 355 aa27.94■■■□□ 2.06
ATPAF1-202ENST00000371937 ATMINO43313 823 aaPredicted RBP27.94■■■□□ 2.06
ATPAF1-202ENST00000371937 NCK2O43639 380 aa27.94■■■□□ 2.06
ATPAF1-202ENST00000371937 ATN1P54259 1190 aaPredicted RBP27.94■■■□□ 2.06
ATPAF1-202ENST00000371937 ORC1Q13415 861 aa27.94■■■□□ 2.06
ATPAF1-202ENST00000371937 STILQ15468 1287 aa27.94■■■□□ 2.06
ATPAF1-202ENST00000371937 CNGA2Q16280 664 aa27.94■■■□□ 2.06
ATPAF1-202ENST00000371937 LIMS2Q7Z4I7 341 aa27.94■■■□□ 2.06
ATPAF1-202ENST00000371937 RTN4RL1Q86UN2 441 aaPredicted RBP27.94■■■□□ 2.06
ATPAF1-202ENST00000371937 ZNF564Q8TBZ8 553 aaPredicted RBP27.94■■■□□ 2.06
ATPAF1-202ENST00000371937 UBE2Q2Q8WVN8 375 aa27.94■■■□□ 2.06
ATPAF1-202ENST00000371937 ARMC5Q96C12 935 aa27.94■■■□□ 2.06
ATPAF1-202ENST00000371937 OSBPL9Q96SU4 736 aa27.94■■■□□ 2.06
ATPAF1-202ENST00000371937 FAM163BP0C2L3 166 aa27.93■■■□□ 2.06
ATPAF1-202ENST00000371937 IBSPP21815 317 aaPredicted RBP27.93■■■□□ 2.06
ATPAF1-202ENST00000371937 MMP8P22894 467 aa27.93■■■□□ 2.06
ATPAF1-202ENST00000371937 MNX1P50219 401 aaPredicted RBP27.93■■■□□ 2.06
ATPAF1-202ENST00000371937 FAM189BP81408 668 aa27.93■■■□□ 2.06
ATPAF1-202ENST00000371937 GRIK3Q13003 919 aa27.93■■■□□ 2.06
ATPAF1-202ENST00000371937 RPS6KA1Q15418 735 aa27.93■■■□□ 2.06
ATPAF1-202ENST00000371937 C11orf63Q6NUN7 778 aa27.93■■■□□ 2.06
ATPAF1-202ENST00000371937 TOP6BLQ8N6T0 577 aa27.93■■■□□ 2.06
ATPAF1-202ENST00000371937 OR6B3Q8NGW1 331 aa27.93■■■□□ 2.06
ATPAF1-202ENST00000371937 TOX2Q96NM4 488 aa27.93■■■□□ 2.06
ATPAF1-202ENST00000371937 C11orf70Q9BRQ4 267 aa27.93■■■□□ 2.06
ATPAF1-202ENST00000371937 INPPL1O15357 1258 aa27.92■■■□□ 2.06
ATPAF1-202ENST00000371937 CALB1P05937 261 aa27.92■■■□□ 2.06
ATPAF1-202ENST00000371937 C1orf53Q5VUE5 145 aa27.92■■■□□ 2.06
ATPAF1-202ENST00000371937 C1orf131Q8NDD1 294 aaKnown RBP27.92■■■□□ 2.06
ATPAF1-202ENST00000371937 ABCB6Q9NP58 842 aa27.92■■■□□ 2.06
ATPAF1-202ENST00000371937 AMFRQ9UKV5 643 aa27.92■■■□□ 2.06
ATPAF1-202ENST00000371937 WDR3Q9UNX4 943 aaKnown RBP eCLIP27.92■■■□□ 2.06
ATPAF1-202ENST00000371937 PODXLO00592 558 aa27.92■■■□□ 2.06
ATPAF1-202ENST00000371937 NBNO60934 754 aa27.92■■■□□ 2.06
ATPAF1-202ENST00000371937 SRGAP2O75044 1071 aa27.92■■■□□ 2.06
ATPAF1-202ENST00000371937 RRM1P23921 792 aa27.92■■■□□ 2.06
ATPAF1-202ENST00000371937 PLEKHG4Q58EX7 1191 aa27.92■■■□□ 2.06
ATPAF1-202ENST00000371937 MMS22LQ6ZRQ5 1243 aa27.92■■■□□ 2.06
ATPAF1-202ENST00000371937 DDX27Q96GQ7 796 aaKnown RBP27.92■■■□□ 2.06
ATPAF1-202ENST00000371937 SNX25Q9H3E2 840 aa27.92■■■□□ 2.06
ATPAF1-202ENST00000371937 MRPL47Q9HD33 250 aaKnown RBP27.92■■■□□ 2.06
ATPAF1-202ENST00000371937 O00370 1275 aa27.91■■■□□ 2.06
ATPAF1-202ENST00000371937 PARNO95453 639 aaKnown RBP27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms