RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 RPGRQ92834 1020 aaKnown RBP13.13□□□□□ -0.31
CDCA3-212ENST00000604599 KREMEN1Q96MU8 473 aa13.13□□□□□ -0.31
CDCA3-212ENST00000604599 FIZ1Q96SL8 496 aa13.13□□□□□ -0.31
CDCA3-212ENST00000604599 NMUR2Q9GZQ4 415 aa13.13□□□□□ -0.31
CDCA3-212ENST00000604599 PPM1HQ9ULR3 514 aa13.13□□□□□ -0.31
CDCA3-212ENST00000604599 GOLGA8SH3BPF8 625 aa13.12□□□□□ -0.31
CDCA3-212ENST00000604599 GOLGA8MH3BSY2 632 aa13.12□□□□□ -0.31
CDCA3-212ENST00000604599 FCHO1O14526 889 aa13.12□□□□□ -0.31
CDCA3-212ENST00000604599 OR6B1O95007 311 aa13.12□□□□□ -0.31
CDCA3-212ENST00000604599 ENO1P06733 434 aaKnown RBP13.12□□□□□ -0.31
CDCA3-212ENST00000604599 TAL1P17542 331 aaPredicted RBP13.12□□□□□ -0.31
CDCA3-212ENST00000604599 SNAP25P60880 206 aa13.12□□□□□ -0.31
CDCA3-212ENST00000604599 MTM1Q13496 603 aa13.12□□□□□ -0.31
CDCA3-212ENST00000604599 EPC2Q52LR7 807 aa13.12□□□□□ -0.31
CDCA3-212ENST00000604599 CEP128Q6ZU80 1094 aa13.12□□□□□ -0.31
CDCA3-212ENST00000604599 RAPH1Q70E73 1250 aa13.12□□□□□ -0.31
CDCA3-212ENST00000604599 ALYREFQ86V81 257 aaKnown RBP13.12□□□□□ -0.31
CDCA3-212ENST00000604599 ARHGAP24Q8N264 748 aa13.12□□□□□ -0.31
CDCA3-212ENST00000604599 TUBB6Q9BUF5 446 aa13.12□□□□□ -0.31
CDCA3-212ENST00000604599 KCNK13Q9HB14 408 aa13.12□□□□□ -0.31
CDCA3-212ENST00000604599 ARHGEF4Q9NR80 690 aa13.12□□□□□ -0.31
CDCA3-212ENST00000604599 STK32BQ9NY57 414 aa13.12□□□□□ -0.31
CDCA3-212ENST00000604599 CLIC5Q9NZA1 410 aa13.12□□□□□ -0.31
CDCA3-212ENST00000604599 ATRNL1Q5VV63 1379 aa13.12□□□□□ -0.31
CDCA3-212ENST00000604599 F5H6K3 240 aa13.12□□□□□ -0.31
CDCA3-212ENST00000604599 MSH4O15457 936 aa13.12□□□□□ -0.31
CDCA3-212ENST00000604599 PENKP01210 267 aaPredicted RBP13.12□□□□□ -0.31
CDCA3-212ENST00000604599 FDX1P10109 184 aa13.12□□□□□ -0.31
CDCA3-212ENST00000604599 HARSP12081 509 aaKnown RBP13.12□□□□□ -0.31
CDCA3-212ENST00000604599 CYP11B1P15538 503 aa13.12□□□□□ -0.31
CDCA3-212ENST00000604599 KLRC2P26717 231 aa13.12□□□□□ -0.31
CDCA3-212ENST00000604599 TPP2P29144 1249 aaPredicted RBP13.12□□□□□ -0.31
CDCA3-212ENST00000604599 GRIA2P42262 883 aa13.12□□□□□ -0.31
CDCA3-212ENST00000604599 PDIA2Q13087 525 aaKnown RBP13.12□□□□□ -0.31
CDCA3-212ENST00000604599 NFIL3Q16649 462 aa13.12□□□□□ -0.31
CDCA3-212ENST00000604599 SATL1Q86VE3 508 aa13.12□□□□□ -0.31
CDCA3-212ENST00000604599 RBM12BQ8IXT5 1001 aaKnown RBP13.12□□□□□ -0.31
CDCA3-212ENST00000604599 FAM71AQ8IYT1 594 aa13.12□□□□□ -0.31
CDCA3-212ENST00000604599 ZNF276Q8N554 614 aa13.12□□□□□ -0.31
CDCA3-212ENST00000604599 ZSWIM2Q8NEG5 633 aa13.12□□□□□ -0.31
CDCA3-212ENST00000604599 DDX27Q96GQ7 796 aaKnown RBP13.12□□□□□ -0.31
CDCA3-212ENST00000604599 DNAJC1Q96KC8 554 aaKnown RBP13.12□□□□□ -0.31
CDCA3-212ENST00000604599 MBOAT7Q96N66 472 aa13.12□□□□□ -0.31
CDCA3-212ENST00000604599 OLFM3Q96PB7 478 aa13.12□□□□□ -0.31
CDCA3-212ENST00000604599 PANX3Q96QZ0 392 aa13.12□□□□□ -0.31
CDCA3-212ENST00000604599 PHACTR1Q9C0D0 580 aa13.12□□□□□ -0.31
CDCA3-212ENST00000604599 TMEM117Q9H0C3 514 aa13.12□□□□□ -0.31
CDCA3-212ENST00000604599 KLHL11Q9NVR0 708 aa13.12□□□□□ -0.31
CDCA3-212ENST00000604599 MEIS2O14770 477 aa13.12□□□□□ -0.31
CDCA3-212ENST00000604599 PFDN1O60925 122 aa13.12□□□□□ -0.31
CDCA3-212ENST00000604599 MYL2P10916 166 aa13.12□□□□□ -0.31
CDCA3-212ENST00000604599 CD58P19256 250 aa13.12□□□□□ -0.31
CDCA3-212ENST00000604599 ADSSP30520 456 aa13.12□□□□□ -0.31
CDCA3-212ENST00000604599 VAMP7P51809 220 aa13.12□□□□□ -0.31
CDCA3-212ENST00000604599 CENPCQ03188 943 aa13.12□□□□□ -0.31
CDCA3-212ENST00000604599 KLF1Q13351 362 aaPredicted RBP13.12□□□□□ -0.31
CDCA3-212ENST00000604599 SPATA31A5Q5VU36 1347 aa13.12□□□□□ -0.31
CDCA3-212ENST00000604599 SPATA31A6Q5VVP1 1343 aa13.12□□□□□ -0.31
CDCA3-212ENST00000604599 C1orf186Q6ZWK4 172 aa13.12□□□□□ -0.31
CDCA3-212ENST00000604599 ANKS1BQ7Z6G8 1248 aa13.12□□□□□ -0.31
CDCA3-212ENST00000604599 SPATA31A7Q8IWB4 1347 aa13.12□□□□□ -0.31
CDCA3-212ENST00000604599 VAV3Q9UKW4 847 aa13.12□□□□□ -0.31
CDCA3-212ENST00000604599 LOC102724428A0A0B4J2F2 783 aa13.11□□□□□ -0.31
CDCA3-212ENST00000604599 VAV1P15498 845 aa13.11□□□□□ -0.31
CDCA3-212ENST00000604599 ARL4CP56559 192 aa13.11□□□□□ -0.31
CDCA3-212ENST00000604599 SIK1P57059 783 aa13.11□□□□□ -0.31
CDCA3-212ENST00000604599 BPIFB4P59827 614 aa13.11□□□□□ -0.31
CDCA3-212ENST00000604599 KDSRQ06136 332 aa13.11□□□□□ -0.31
CDCA3-212ENST00000604599 RASA2Q15283 850 aa13.11□□□□□ -0.31
CDCA3-212ENST00000604599 CCNG2Q16589 344 aa13.11□□□□□ -0.31
CDCA3-212ENST00000604599 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.11□□□□□ -0.31
CDCA3-212ENST00000604599 KAZNQ674X7 775 aa13.11□□□□□ -0.31
CDCA3-212ENST00000604599 OLFML2BQ68BL8 750 aa13.11□□□□□ -0.31
CDCA3-212ENST00000604599 RBM15BQ8NDT2 890 aaKnown RBP13.11□□□□□ -0.31
CDCA3-212ENST00000604599 CCDC110Q8TBZ0 833 aa13.11□□□□□ -0.31
CDCA3-212ENST00000604599 MPP4Q96JB8 637 aa13.11□□□□□ -0.31
CDCA3-212ENST00000604599 THTPAQ9BU02 230 aa13.11□□□□□ -0.31
CDCA3-212ENST00000604599 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.11□□□□□ -0.31
CDCA3-212ENST00000604599 CRABP2P29373 138 aa13.11□□□□□ -0.31
CDCA3-212ENST00000604599 AP2B1P63010 937 aa13.11□□□□□ -0.31
CDCA3-212ENST00000604599 GPS1Q13098 491 aa13.11□□□□□ -0.31
CDCA3-212ENST00000604599 ACBD5Q5T8D3 534 aaPredicted RBP13.11□□□□□ -0.31
CDCA3-212ENST00000604599 C1orf146Q5VVC0 180 aa13.11□□□□□ -0.31
CDCA3-212ENST00000604599 SCUBE1Q8IWY4 988 aa13.11□□□□□ -0.31
CDCA3-212ENST00000604599 DHX38Q92620 1227 aaKnown RBP13.11□□□□□ -0.31
CDCA3-212ENST00000604599 PPP2R3CQ969Q6 453 aa13.11□□□□□ -0.31
CDCA3-212ENST00000604599 OXNAD1Q96HP4 312 aaPredicted RBP13.11□□□□□ -0.31
CDCA3-212ENST00000604599 TMEM165Q9HC07 324 aa13.11□□□□□ -0.31
CDCA3-212ENST00000604599 MTO1Q9Y2Z2 717 aaKnown RBP13.11□□□□□ -0.31
CDCA3-212ENST00000604599 FAM237BA0A1B0GVD1 139 aa13.1□□□□□ -0.31
CDCA3-212ENST00000604599 TTC36A6NLP5 189 aa13.1□□□□□ -0.31
CDCA3-212ENST00000604599 DNALI1O14645 258 aaPredicted RBP13.1□□□□□ -0.31
CDCA3-212ENST00000604599 DNAJC6O75061 913 aa13.1□□□□□ -0.31
CDCA3-212ENST00000604599 COQ9O75208 318 aa13.1□□□□□ -0.31
CDCA3-212ENST00000604599 ATP6V1G1O75348 118 aa13.1□□□□□ -0.31
CDCA3-212ENST00000604599 CIB2O75838 187 aa13.1□□□□□ -0.31
CDCA3-212ENST00000604599 DLDP09622 509 aaKnown RBP13.1□□□□□ -0.31
CDCA3-212ENST00000604599 GYS1P13807 737 aa13.1□□□□□ -0.31
CDCA3-212ENST00000604599 ARSEP51690 589 aa13.1□□□□□ -0.31
CDCA3-212ENST00000604599 KCNQ4P56696 695 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms