RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 TAS2R14Q9NYV8 317 aa27.82■■■□□ 2.04
SCAMP4-210ENST00000588555 INPPL1O15357 1258 aa27.81■■■□□ 2.04
SCAMP4-210ENST00000588555 GNA15P30679 374 aa27.81■■■□□ 2.04
SCAMP4-210ENST00000588555 WHAMMQ8TF30 809 aa27.81■■■□□ 2.04
SCAMP4-210ENST00000588555 SEPT11Q9NVA2 429 aaKnown RBP27.81■■■□□ 2.04
SCAMP4-210ENST00000588555 ATP11BQ9Y2G3 1177 aa27.81■■■□□ 2.04
SCAMP4-210ENST00000588555 EOMESO95936 686 aa27.81■■■□□ 2.04
SCAMP4-210ENST00000588555 INCA1Q0VD86 236 aa27.81■■■□□ 2.04
SCAMP4-210ENST00000588555 SYT10Q6XYQ8 523 aa27.81■■■□□ 2.04
SCAMP4-210ENST00000588555 SCLYQ96I15 445 aa27.81■■■□□ 2.04
SCAMP4-210ENST00000588555 ZNF560Q96MR9 790 aa27.81■■■□□ 2.04
SCAMP4-210ENST00000588555 SPTLC1O15269 473 aa27.8■■■□□ 2.04
SCAMP4-210ENST00000588555 KIF5CO60282 957 aa27.8■■■□□ 2.04
SCAMP4-210ENST00000588555 CILPO75339 1184 aa27.8■■■□□ 2.04
SCAMP4-210ENST00000588555 CXCL10P02778 98 aa27.8■■■□□ 2.04
SCAMP4-210ENST00000588555 PNPLA4P41247 253 aa27.8■■■□□ 2.04
SCAMP4-210ENST00000588555 GNG11P61952 73 aa27.8■■■□□ 2.04
SCAMP4-210ENST00000588555 TCTN1Q2MV58 587 aa27.8■■■□□ 2.04
SCAMP4-210ENST00000588555 FAM43BQ6ZT52 329 aaPredicted RBP27.8■■■□□ 2.04
SCAMP4-210ENST00000588555 WDR24Q96S15 920 aa27.8■■■□□ 2.04
SCAMP4-210ENST00000588555 PPP1R12CQ9BZL4 782 aa27.8■■■□□ 2.04
SCAMP4-210ENST00000588555 ISCUQ9H1K1 167 aa27.8■■■□□ 2.04
SCAMP4-210ENST00000588555 SALL4Q9UJQ4 1053 aa27.8■■■□□ 2.04
SCAMP4-210ENST00000588555 INTUQ9ULD6 942 aa27.8■■■□□ 2.04
SCAMP4-210ENST00000588555 GTF3C5Q9Y5Q8 519 aaPredicted RBP27.8■■■□□ 2.04
SCAMP4-210ENST00000588555 SNX9Q9Y5X1 595 aa27.8■■■□□ 2.04
SCAMP4-210ENST00000588555 GZMAP12544 262 aa27.79■■■□□ 2.04
SCAMP4-210ENST00000588555 IBSPP21815 317 aaPredicted RBP27.79■■■□□ 2.04
SCAMP4-210ENST00000588555 CCL23P55773 120 aa27.79■■■□□ 2.04
SCAMP4-210ENST00000588555 LRRC26Q2I0M4 334 aa27.79■■■□□ 2.04
SCAMP4-210ENST00000588555 ZNF394Q53GI3 561 aa27.79■■■□□ 2.04
SCAMP4-210ENST00000588555 SEPT8Q92599 483 aa27.79■■■□□ 2.04
SCAMP4-210ENST00000588555 GDAP2Q9NXN4 497 aa27.79■■■□□ 2.04
SCAMP4-210ENST00000588555 MYO1AQ9UBC5 1043 aa27.79■■■□□ 2.04
SCAMP4-210ENST00000588555 TMCO5BA8MYB1 307 aa27.78■■■□□ 2.04
SCAMP4-210ENST00000588555 PARNO95453 639 aaKnown RBP27.78■■■□□ 2.04
SCAMP4-210ENST00000588555 H2AFZP0C0S5 128 aa27.78■■■□□ 2.04
SCAMP4-210ENST00000588555 CAPN2P17655 700 aa27.78■■■□□ 2.04
SCAMP4-210ENST00000588555 CYP2C18P33260 490 aa27.78■■■□□ 2.04
SCAMP4-210ENST00000588555 TAF6P49848 677 aa27.78■■■□□ 2.04
SCAMP4-210ENST00000588555 H2AFVQ71UI9 128 aa27.78■■■□□ 2.04
SCAMP4-210ENST00000588555 APBB2Q92870 758 aa27.78■■■□□ 2.04
SCAMP4-210ENST00000588555 TWNKQ96RR1 684 aa27.78■■■□□ 2.04
SCAMP4-210ENST00000588555 MMS19Q96T76 1030 aa27.78■■■□□ 2.04
SCAMP4-210ENST00000588555 ZSWIM1Q9BR11 485 aa27.78■■■□□ 2.04
SCAMP4-210ENST00000588555 HMGXB4Q9UGU5 601 aa27.78■■■□□ 2.04
SCAMP4-210ENST00000588555 KPNA7A9QM74 516 aa27.78■■■□□ 2.04
SCAMP4-210ENST00000588555 RAD23BP54727 409 aa27.78■■■□□ 2.04
SCAMP4-210ENST00000588555 GALCP54803 685 aa27.78■■■□□ 2.04
SCAMP4-210ENST00000588555 TMEM106CQ9BVX2 250 aa27.78■■■□□ 2.04
SCAMP4-210ENST00000588555 TDRD15B5MCY1 1934 aaKnown RBP27.78■■■□□ 2.04
SCAMP4-210ENST00000588555 MACROD2A1Z1Q3 448 aa27.77■■■□□ 2.04
SCAMP4-210ENST00000588555 BTNL10A8MVZ5 291 aa27.77■■■□□ 2.04
SCAMP4-210ENST00000588555 ENPP3O14638 875 aa27.77■■■□□ 2.04
SCAMP4-210ENST00000588555 CFHP08603 1231 aa27.77■■■□□ 2.04
SCAMP4-210ENST00000588555 LILRA4P59901 499 aa27.77■■■□□ 2.04
SCAMP4-210ENST00000588555 LIMS2Q7Z4I7 341 aa27.77■■■□□ 2.04
SCAMP4-210ENST00000588555 TTC39CQ8N584 583 aa27.77■■■□□ 2.04
SCAMP4-210ENST00000588555 ZNF606Q8WXB4 792 aa27.77■■■□□ 2.04
SCAMP4-210ENST00000588555 CACNG4Q9UBN1 327 aa27.77■■■□□ 2.04
SCAMP4-210ENST00000588555 DNAI1Q9UI46 699 aa27.77■■■□□ 2.04
SCAMP4-210ENST00000588555 BARX2Q9UMQ3 279 aaPredicted RBP27.77■■■□□ 2.04
SCAMP4-210ENST00000588555 PAXBP1Q9Y5B6 917 aa27.77■■■□□ 2.04
SCAMP4-210ENST00000588555 THAP12O43422 761 aa27.76■■■□□ 2.03
SCAMP4-210ENST00000588555 POMCP01189 267 aa27.76■■■□□ 2.03
SCAMP4-210ENST00000588555 PAEPP09466 180 aa27.76■■■□□ 2.03
SCAMP4-210ENST00000588555 CLTBP09497 229 aa27.76■■■□□ 2.03
SCAMP4-210ENST00000588555 GRIK3Q13003 919 aa27.76■■■□□ 2.03
SCAMP4-210ENST00000588555 CLEC16AQ2KHT3 1053 aa27.76■■■□□ 2.03
SCAMP4-210ENST00000588555 SOWAHAQ2M3V2 549 aa27.76■■■□□ 2.03
SCAMP4-210ENST00000588555 SV2CQ496J9 727 aa27.76■■■□□ 2.03
SCAMP4-210ENST00000588555 ZNF569Q5MCW4 686 aa27.76■■■□□ 2.03
SCAMP4-210ENST00000588555 SLC4A11Q8NBS3 891 aa27.76■■■□□ 2.03
SCAMP4-210ENST00000588555 ELOVL4Q9GZR5 314 aa27.76■■■□□ 2.03
SCAMP4-210ENST00000588555 RTN2O75298 545 aa27.76■■■□□ 2.03
SCAMP4-210ENST00000588555 CYP1A1P04798 512 aaPredicted RBP27.76■■■□□ 2.03
SCAMP4-210ENST00000588555 UNGP13051 313 aaPredicted RBP27.76■■■□□ 2.03
SCAMP4-210ENST00000588555 CLLU1OSQ5K130 101 aa27.76■■■□□ 2.03
SCAMP4-210ENST00000588555 NECAB2Q7Z6G3 386 aa27.76■■■□□ 2.03
SCAMP4-210ENST00000588555 TFAP2BQ92481 460 aa27.76■■■□□ 2.03
SCAMP4-210ENST00000588555 ZNF592Q92610 1267 aa27.76■■■□□ 2.03
SCAMP4-210ENST00000588555 SECISBP2LQ93073 1101 aaKnown RBP27.76■■■□□ 2.03
SCAMP4-210ENST00000588555 TMEM39AQ9NV64 488 aa27.76■■■□□ 2.03
SCAMP4-210ENST00000588555 TMEM161AQ9NX61 479 aa27.76■■■□□ 2.03
SCAMP4-210ENST00000588555 FTLP02792 175 aaPredicted RBP27.75■■■□□ 2.03
SCAMP4-210ENST00000588555 TMEM253P0C7T8 217 aa27.75■■■□□ 2.03
SCAMP4-210ENST00000588555 IGFBP6P24592 240 aaPredicted RBP27.75■■■□□ 2.03
SCAMP4-210ENST00000588555 BRD2P25440 801 aaKnown RBP27.75■■■□□ 2.03
SCAMP4-210ENST00000588555 CLCNKBP51801 687 aa27.75■■■□□ 2.03
SCAMP4-210ENST00000588555 NDST1P52848 882 aa27.75■■■□□ 2.03
SCAMP4-210ENST00000588555 MRPL45Q9BRJ2 306 aaKnown RBP27.75■■■□□ 2.03
SCAMP4-210ENST00000588555 ELAC1Q9H777 363 aaKnown RBP27.75■■■□□ 2.03
SCAMP4-210ENST00000588555 INPP5FQ9Y2H2 1132 aa27.75■■■□□ 2.03
SCAMP4-210ENST00000588555 ANKRD62A6NC57 917 aa27.74■■■□□ 2.03
SCAMP4-210ENST00000588555 RPL9P32969 192 aaKnown RBP27.74■■■□□ 2.03
SCAMP4-210ENST00000588555 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.74■■■□□ 2.03
SCAMP4-210ENST00000588555 SLC35F6Q8N357 371 aa27.74■■■□□ 2.03
SCAMP4-210ENST00000588555 RNF10Q8N5U6 811 aaKnown RBP27.74■■■□□ 2.03
SCAMP4-210ENST00000588555 KIF18AQ8NI77 898 aa27.74■■■□□ 2.03
SCAMP4-210ENST00000588555 TMEM176AQ96HP8 235 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms