RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 GNA15P30679 374 aa32.52■■■□□ 2.8
CCM2-219ENST00000544363 SCNN1GP51170 649 aa32.52■■■□□ 2.8
CCM2-219ENST00000544363 SEPT8Q92599 483 aa32.52■■■□□ 2.8
CCM2-219ENST00000544363 PACSIN1Q9BY11 444 aa32.52■■■□□ 2.8
CCM2-219ENST00000544363 DUSP10Q9Y6W6 482 aa32.52■■■□□ 2.8
CCM2-219ENST00000544363 GNG11P61952 73 aa32.51■■■□□ 2.8
CCM2-219ENST00000544363 SYT10Q6XYQ8 523 aa32.51■■■□□ 2.8
CCM2-219ENST00000544363 APBB2Q92870 758 aa32.51■■■□□ 2.8
CCM2-219ENST00000544363 MMS19Q96T76 1030 aa32.51■■■□□ 2.8
CCM2-219ENST00000544363 INTUQ9ULD6 942 aa32.51■■■□□ 2.8
CCM2-219ENST00000544363 H2AFZP0C0S5 128 aa32.51■■■□□ 2.79
CCM2-219ENST00000544363 H2AFVQ71UI9 128 aa32.51■■■□□ 2.79
CCM2-219ENST00000544363 TTC39CQ8N584 583 aa32.51■■■□□ 2.79
CCM2-219ENST00000544363 PPP1R12CQ9BZL4 782 aa32.51■■■□□ 2.79
CCM2-219ENST00000544363 WNT8AQ9H1J5 351 aa32.51■■■□□ 2.79
CCM2-219ENST00000544363 MYO1AQ9UBC5 1043 aa32.51■■■□□ 2.79
CCM2-219ENST00000544363 TBX21Q9UL17 535 aa32.51■■■□□ 2.79
CCM2-219ENST00000544363 SNX9Q9Y5X1 595 aa32.51■■■□□ 2.79
CCM2-219ENST00000544363 GZMAP12544 262 aa32.5■■■□□ 2.79
CCM2-219ENST00000544363 TAF6P49848 677 aa32.5■■■□□ 2.79
CCM2-219ENST00000544363 SCLYQ96I15 445 aa32.5■■■□□ 2.79
CCM2-219ENST00000544363 TAS2R14Q9NYV8 317 aa32.5■■■□□ 2.79
CCM2-219ENST00000544363 TANC1Q9C0D5 1861 aa32.5■■■□□ 2.79
CCM2-219ENST00000544363 TMCO5BA8MYB1 307 aa32.49■■■□□ 2.79
CCM2-219ENST00000544363 CILPO75339 1184 aa32.49■■■□□ 2.79
CCM2-219ENST00000544363 CCL23P55773 120 aa32.49■■■□□ 2.79
CCM2-219ENST00000544363 ZNF394Q53GI3 561 aa32.49■■■□□ 2.79
CCM2-219ENST00000544363 INPPL1O15357 1258 aa32.48■■■□□ 2.79
CCM2-219ENST00000544363 CXCL10P02778 98 aa32.48■■■□□ 2.79
CCM2-219ENST00000544363 INCA1Q0VD86 236 aa32.48■■■□□ 2.79
CCM2-219ENST00000544363 SV2CQ496J9 727 aa32.48■■■□□ 2.79
CCM2-219ENST00000544363 DNAAF5Q86Y56 855 aa32.48■■■□□ 2.79
CCM2-219ENST00000544363 ZNF592Q92610 1267 aa32.48■■■□□ 2.79
CCM2-219ENST00000544363 ISCUQ9H1K1 167 aa32.48■■■□□ 2.79
CCM2-219ENST00000544363 GDAP2Q9NXN4 497 aa32.48■■■□□ 2.79
CCM2-219ENST00000544363 DNAI1Q9UI46 699 aa32.48■■■□□ 2.79
CCM2-219ENST00000544363 BARX2Q9UMQ3 279 aaPredicted RBP32.48■■■□□ 2.79
CCM2-219ENST00000544363 KPNA7A9QM74 516 aa32.48■■■□□ 2.79
CCM2-219ENST00000544363 ENPP3O14638 875 aa32.48■■■□□ 2.79
CCM2-219ENST00000544363 THAP12O43422 761 aa32.48■■■□□ 2.79
CCM2-219ENST00000544363 CYP2C18P33260 490 aa32.48■■■□□ 2.79
CCM2-219ENST00000544363 GALCP54803 685 aa32.48■■■□□ 2.79
CCM2-219ENST00000544363 LRRC26Q2I0M4 334 aa32.48■■■□□ 2.79
CCM2-219ENST00000544363 ZNF569Q5MCW4 686 aa32.48■■■□□ 2.79
CCM2-219ENST00000544363 NECAB2Q7Z6G3 386 aa32.48■■■□□ 2.79
CCM2-219ENST00000544363 WHAMMQ8TF30 809 aa32.48■■■□□ 2.79
CCM2-219ENST00000544363 TMEM39AQ9NV64 488 aa32.48■■■□□ 2.79
CCM2-219ENST00000544363 PUF60Q9UHX1 559 aaKnown RBP32.48■■■□□ 2.79
CCM2-219ENST00000544363 PAXBP1Q9Y5B6 917 aa32.48■■■□□ 2.79
CCM2-219ENST00000544363 MACROD2A1Z1Q3 448 aa32.47■■■□□ 2.79
CCM2-219ENST00000544363 SPTLC1O15269 473 aa32.47■■■□□ 2.79
CCM2-219ENST00000544363 RTN2O75298 545 aa32.47■■■□□ 2.79
CCM2-219ENST00000544363 PAEPP09466 180 aa32.47■■■□□ 2.79
CCM2-219ENST00000544363 GRIK3Q13003 919 aa32.47■■■□□ 2.79
CCM2-219ENST00000544363 PDZRN4Q6ZMN7 1036 aaPredicted RBP32.47■■■□□ 2.79
CCM2-219ENST00000544363 ZNF606Q8WXB4 792 aa32.47■■■□□ 2.79
CCM2-219ENST00000544363 SECISBP2LQ93073 1101 aaKnown RBP32.47■■■□□ 2.79
CCM2-219ENST00000544363 WDR24Q96S15 920 aa32.47■■■□□ 2.79
CCM2-219ENST00000544363 BTNL10A8MVZ5 291 aa32.46■■■□□ 2.79
CCM2-219ENST00000544363 POMCP01189 267 aa32.46■■■□□ 2.79
CCM2-219ENST00000544363 CLTBP09497 229 aa32.46■■■□□ 2.79
CCM2-219ENST00000544363 RAD23BP54727 409 aa32.46■■■□□ 2.79
CCM2-219ENST00000544363 LILRA4P59901 499 aa32.46■■■□□ 2.79
CCM2-219ENST00000544363 KIF18AQ8NI77 898 aa32.46■■■□□ 2.79
CCM2-219ENST00000544363 INPP5FQ9Y2H2 1132 aa32.46■■■□□ 2.79
CCM2-219ENST00000544363 FTLP02792 175 aaPredicted RBP32.45■■■□□ 2.79
CCM2-219ENST00000544363 RPL9P32969 192 aaKnown RBP32.45■■■□□ 2.79
CCM2-219ENST00000544363 CLEC16AQ2KHT3 1053 aa32.45■■■□□ 2.79
CCM2-219ENST00000544363 GLB1LQ6UWU2 654 aa32.45■■■□□ 2.79
CCM2-219ENST00000544363 TRIM72Q6ZMU5 477 aa32.45■■■□□ 2.79
CCM2-219ENST00000544363 ELOVL4Q9GZR5 314 aa32.45■■■□□ 2.79
CCM2-219ENST00000544363 PDCL3Q9H2J4 239 aa32.45■■■□□ 2.79
CCM2-219ENST00000544363 ELAC1Q9H777 363 aaKnown RBP32.45■■■□□ 2.79
CCM2-219ENST00000544363 TMEM161AQ9NX61 479 aa32.45■■■□□ 2.79
CCM2-219ENST00000544363 SALL4Q9UJQ4 1053 aa32.45■■■□□ 2.79
CCM2-219ENST00000544363 KIAA0100Q14667 2235 aaKnown RBP32.45■■■□□ 2.78
CCM2-219ENST00000544363 SCN5AQ14524 2016 aa32.45■■■□□ 2.78
CCM2-219ENST00000544363 ANKRD62A6NC57 917 aa32.44■■■□□ 2.78
CCM2-219ENST00000544363 TCTN1Q2MV58 587 aa32.44■■■□□ 2.78
CCM2-219ENST00000544363 SLC35F6Q8N357 371 aa32.44■■■□□ 2.78
CCM2-219ENST00000544363 RNF10Q8N5U6 811 aaKnown RBP32.44■■■□□ 2.78
CCM2-219ENST00000544363 SLC4A11Q8NBS3 891 aa32.44■■■□□ 2.78
CCM2-219ENST00000544363 TMEM176AQ96HP8 235 aa32.44■■■□□ 2.78
CCM2-219ENST00000544363 TWNKQ96RR1 684 aa32.44■■■□□ 2.78
CCM2-219ENST00000544363 PRDM10Q9NQV6 1147 aa32.44■■■□□ 2.78
CCM2-219ENST00000544363 HMGXB4Q9UGU5 601 aa32.44■■■□□ 2.78
CCM2-219ENST00000544363 PODXLO00592 558 aa32.44■■■□□ 2.78
CCM2-219ENST00000544363 TMEM253P0C7T8 217 aa32.44■■■□□ 2.78
CCM2-219ENST00000544363 SOWAHAQ2M3V2 549 aa32.44■■■□□ 2.78
CCM2-219ENST00000544363 ACAD10Q6JQN1 1059 aa32.44■■■□□ 2.78
CCM2-219ENST00000544363 MRPL45Q9BRJ2 306 aaKnown RBP32.44■■■□□ 2.78
CCM2-219ENST00000544363 MCOLN1Q9GZU1 580 aa32.44■■■□□ 2.78
CCM2-219ENST00000544363 TET1Q8NFU7 2136 aa32.43■■■□□ 2.78
CCM2-219ENST00000544363 CYP1A1P04798 512 aaPredicted RBP32.43■■■□□ 2.78
CCM2-219ENST00000544363 UNGP13051 313 aaPredicted RBP32.43■■■□□ 2.78
CCM2-219ENST00000544363 BRD2P25440 801 aaKnown RBP32.43■■■□□ 2.78
CCM2-219ENST00000544363 CLCNKBP51801 687 aa32.43■■■□□ 2.78
CCM2-219ENST00000544363 NDST1P52848 882 aa32.43■■■□□ 2.78
CCM2-219ENST00000544363 CLLU1OSQ5K130 101 aa32.43■■■□□ 2.78
CCM2-219ENST00000544363 LIMS2Q7Z4I7 341 aa32.43■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms