RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 SYT12Q8IV01 421 aa6.33□□□□□ -1.4
LSM5-209ENST00000468872 SLC35B2Q8TB61 432 aa6.33□□□□□ -1.4
LSM5-209ENST00000468872 ANKS1AQ92625 1134 aa6.33□□□□□ -1.4
LSM5-209ENST00000468872 GJA10Q969M2 543 aa6.33□□□□□ -1.4
LSM5-209ENST00000468872 ZG16BQ96DA0 208 aa6.33□□□□□ -1.4
LSM5-209ENST00000468872 MRGPRX1Q96LB2 322 aa6.33□□□□□ -1.4
LSM5-209ENST00000468872 DCLRE1CQ96SD1 692 aaKnown RBP6.33□□□□□ -1.4
LSM5-209ENST00000468872 C11orf54Q9H0W9 315 aaPredicted RBP6.33□□□□□ -1.4
LSM5-209ENST00000468872 NUP62CLQ9H1M0 184 aa6.33□□□□□ -1.4
LSM5-209ENST00000468872 MRPL46Q9H2W6 279 aaKnown RBP6.33□□□□□ -1.4
LSM5-209ENST00000468872 TRPM5Q9NZQ8 1165 aa6.33□□□□□ -1.4
LSM5-209ENST00000468872 CPA4Q9UI42 421 aa6.33□□□□□ -1.4
LSM5-209ENST00000468872 CHST2Q9Y4C5 530 aa6.33□□□□□ -1.4
LSM5-209ENST00000468872 USP19O94966 1318 aa6.32□□□□□ -1.4
LSM5-209ENST00000468872 A0A1W2PPL8 197 aa6.32□□□□□ -1.4
LSM5-209ENST00000468872 B5MCH6 92 aa6.32□□□□□ -1.4
LSM5-209ENST00000468872 GRM6O15303 877 aa6.32□□□□□ -1.4
LSM5-209ENST00000468872 TEX33O43247 280 aa6.32□□□□□ -1.4
LSM5-209ENST00000468872 GCP02774 474 aa6.32□□□□□ -1.4
LSM5-209ENST00000468872 KITP10721 976 aa6.32□□□□□ -1.4
LSM5-209ENST00000468872 NPR1P16066 1061 aa6.32□□□□□ -1.4
LSM5-209ENST00000468872 PROZP22891 400 aa6.32□□□□□ -1.4
LSM5-209ENST00000468872 PIK3CBP42338 1070 aa6.32□□□□□ -1.4
LSM5-209ENST00000468872 TM4SF4P48230 202 aa6.32□□□□□ -1.4
LSM5-209ENST00000468872 AK2P54819 239 aa6.32□□□□□ -1.4
LSM5-209ENST00000468872 KRTAP5-3Q6L8H2 238 aa6.32□□□□□ -1.4
LSM5-209ENST00000468872 SEM1Q6ZVN7 128 aa6.32□□□□□ -1.4
LSM5-209ENST00000468872 SPICE1Q8N0Z3 855 aa6.32□□□□□ -1.4
LSM5-209ENST00000468872 OR10H5Q8NGA6 315 aa6.32□□□□□ -1.4
LSM5-209ENST00000468872 MYEOVQ96EZ4 313 aa6.32□□□□□ -1.4
LSM5-209ENST00000468872 APIPQ96GX9 242 aa6.32□□□□□ -1.4
LSM5-209ENST00000468872 TBCBQ99426 244 aa6.32□□□□□ -1.4
LSM5-209ENST00000468872 MRI1Q9BV20 369 aa6.32□□□□□ -1.4
LSM5-209ENST00000468872 FNIP2Q9P278 1114 aa6.32□□□□□ -1.4
LSM5-209ENST00000468872 TAGLN3Q9UI15 199 aa6.32□□□□□ -1.4
LSM5-209ENST00000468872 TPCN1Q9ULQ1 816 aa6.32□□□□□ -1.4
LSM5-209ENST00000468872 PCDHA6Q9UN73 950 aa6.32□□□□□ -1.4
LSM5-209ENST00000468872 CENPVL1A0A0U1RR11 272 aa6.31□□□□□ -1.4
LSM5-209ENST00000468872 GRID2IPA4D2P6 1211 aa6.31□□□□□ -1.4
LSM5-209ENST00000468872 MYO1FO00160 1098 aa6.31□□□□□ -1.4
LSM5-209ENST00000468872 AHSGP02765 367 aa6.31□□□□□ -1.4
LSM5-209ENST00000468872 NHLH2Q02577 135 aa6.31□□□□□ -1.4
LSM5-209ENST00000468872 MORC3Q14149 939 aa6.31□□□□□ -1.4
LSM5-209ENST00000468872 PABPC1LQ4VXU2 614 aaKnown RBP6.31□□□□□ -1.4
LSM5-209ENST00000468872 KHDC1LQ5JSQ8 128 aa6.31□□□□□ -1.4
LSM5-209ENST00000468872 DACT2Q5SW24 774 aa6.31□□□□□ -1.4
LSM5-209ENST00000468872 DNAJC10Q8IXB1 793 aa6.31□□□□□ -1.4
LSM5-209ENST00000468872 BRIX1Q8TDN6 353 aaKnown RBP6.31□□□□□ -1.4
LSM5-209ENST00000468872 MORC4Q8TE76 937 aa6.31□□□□□ -1.4
LSM5-209ENST00000468872 LRRC27Q9C0I9 530 aa6.31□□□□□ -1.4
LSM5-209ENST00000468872 RSAD1Q9HA92 442 aa6.31□□□□□ -1.4
LSM5-209ENST00000468872 AKIP1Q9NQ31 210 aa6.31□□□□□ -1.4
LSM5-209ENST00000468872 SIDT1Q9NXL6 827 aaKnown RBP6.31□□□□□ -1.4
LSM5-209ENST00000468872 PACSIN3Q9UKS6 424 aa6.31□□□□□ -1.4
LSM5-209ENST00000468872 PNPLA7Q6ZV29 1317 aa6.3□□□□□ -1.4
LSM5-209ENST00000468872 PLEKHD1A6NEE1 506 aa6.3□□□□□ -1.4
LSM5-209ENST00000468872 TBKBP1A7MCY6 615 aa6.3□□□□□ -1.4
LSM5-209ENST00000468872 RNASET2O00584 256 aaKnown RBP6.3□□□□□ -1.4
LSM5-209ENST00000468872 LPXNO60711 386 aa6.3□□□□□ -1.4
LSM5-209ENST00000468872 NCR1O76036 304 aa6.3□□□□□ -1.4
LSM5-209ENST00000468872 ATP5JP18859 108 aa6.3□□□□□ -1.4
LSM5-209ENST00000468872 SLC7A1P30825 629 aa6.3□□□□□ -1.4
LSM5-209ENST00000468872 SLC6A4P31645 630 aa6.3□□□□□ -1.4
LSM5-209ENST00000468872 RNASE9P60153 205 aaKnown RBP6.3□□□□□ -1.4
LSM5-209ENST00000468872 CREMQ03060 361 aa6.3□□□□□ -1.4
LSM5-209ENST00000468872 BMT2Q1RMZ1 405 aa6.3□□□□□ -1.4
LSM5-209ENST00000468872 EFCAB12Q6NXP0 572 aa6.3□□□□□ -1.4
LSM5-209ENST00000468872 TOGARAM2Q6ZUX3 1019 aa6.3□□□□□ -1.4
LSM5-209ENST00000468872 SRLQ86TD4 932 aa6.3□□□□□ -1.4
LSM5-209ENST00000468872 IL17RDQ8NFM7 739 aa6.3□□□□□ -1.4
LSM5-209ENST00000468872 GPR150Q8NGU9 434 aa6.3□□□□□ -1.4
LSM5-209ENST00000468872 PHKBQ93100 1093 aa6.3□□□□□ -1.4
LSM5-209ENST00000468872 MYD88Q99836 296 aa6.3□□□□□ -1.4
LSM5-209ENST00000468872 POLR3GLQ9BT43 218 aa6.3□□□□□ -1.4
LSM5-209ENST00000468872 BTBD1Q9H0C5 482 aa6.3□□□□□ -1.4
LSM5-209ENST00000468872 SARS2Q9NP81 518 aaKnown RBP6.3□□□□□ -1.4
LSM5-209ENST00000468872 DAAM1Q9Y4D1 1078 aa6.3□□□□□ -1.4
LSM5-209ENST00000468872 TCRBV7S2A1N4TA0A589 114 aa6.29□□□□□ -1.4
LSM5-209ENST00000468872 GAGE12BA1L429 117 aa6.29□□□□□ -1.4
LSM5-209ENST00000468872 GAGE12HA6NDE8 117 aa6.29□□□□□ -1.4
LSM5-209ENST00000468872 PRSS29PA6NIE9 313 aa6.29□□□□□ -1.4
LSM5-209ENST00000468872 TMEM200CA6NKL6 621 aa6.29□□□□□ -1.4
LSM5-209ENST00000468872 DIRC3C9JPN6 131 aa6.29□□□□□ -1.4
LSM5-209ENST00000468872 KIAA0391O15091 583 aaKnown RBP6.29□□□□□ -1.4
LSM5-209ENST00000468872 TBX3O15119 743 aa6.29□□□□□ -1.4
LSM5-209ENST00000468872 PJA2O43164 708 aa6.29□□□□□ -1.4
LSM5-209ENST00000468872 RHOBTB3O94955 611 aa6.29□□□□□ -1.4
LSM5-209ENST00000468872 MATN4O95460 622 aa6.29□□□□□ -1.4
LSM5-209ENST00000468872 SNRPA1P09661 255 aaKnown RBP6.29□□□□□ -1.4
LSM5-209ENST00000468872 MTHFD1P11586 935 aaKnown RBP6.29□□□□□ -1.4
LSM5-209ENST00000468872 HDCP19113 662 aa6.29□□□□□ -1.4
LSM5-209ENST00000468872 MGAT1P26572 445 aa6.29□□□□□ -1.4
LSM5-209ENST00000468872 PIK3CGP48736 1102 aa6.29□□□□□ -1.4
LSM5-209ENST00000468872 PRIM2P49643 509 aa6.29□□□□□ -1.4
LSM5-209ENST00000468872 IFIT5Q13325 482 aaKnown RBP6.29□□□□□ -1.4
LSM5-209ENST00000468872 ATP2B3Q16720 1220 aa6.29□□□□□ -1.4
LSM5-209ENST00000468872 CCDC93Q567U6 631 aa6.29□□□□□ -1.4
LSM5-209ENST00000468872 C10orf62Q5T681 223 aaPredicted RBP6.29□□□□□ -1.4
LSM5-209ENST00000468872 ZNF529Q6P280 563 aa6.29□□□□□ -1.4
LSM5-209ENST00000468872 XRRA1Q6P2D8 792 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms