RNA–Protein interactions for RNA: ENST00000466213.5

SFPQ-203, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 1 (best)

Gene SFPQ, Length 1,431 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-203ENST00000466213 FAPQ12884 760 aa6.98□□□□□ -1.29
SFPQ-203ENST00000466213 TERF2Q15554 542 aa6.98□□□□□ -1.29
SFPQ-203ENST00000466213 CLEC16AQ2KHT3 1053 aa6.98□□□□□ -1.29
SFPQ-203ENST00000466213 CCDC178Q5BJE1 867 aa6.98□□□□□ -1.29
SFPQ-203ENST00000466213 PRRT3Q5FWE3 981 aa6.98□□□□□ -1.29
SFPQ-203ENST00000466213 RRP12Q5JTH9 1297 aaKnown RBP6.98□□□□□ -1.29
SFPQ-203ENST00000466213 ITPRIPL1Q6GPH6 555 aa6.98□□□□□ -1.29
SFPQ-203ENST00000466213 CTR9Q6PD62 1173 aa6.98□□□□□ -1.29
SFPQ-203ENST00000466213 CYP26C1Q6V0L0 522 aa6.98□□□□□ -1.29
SFPQ-203ENST00000466213 CATSPER4Q7RTX7 472 aa6.98□□□□□ -1.29
SFPQ-203ENST00000466213 SRGAP1Q7Z6B7 1085 aa6.98□□□□□ -1.29
SFPQ-203ENST00000466213 COLGALT2Q8IYK4 626 aa6.98□□□□□ -1.29
SFPQ-203ENST00000466213 EFHBQ8N7U6 833 aa6.98□□□□□ -1.29
SFPQ-203ENST00000466213 C2orf69Q8N8R5 385 aa6.98□□□□□ -1.29
SFPQ-203ENST00000466213 DEPTORQ8TB45 409 aa6.98□□□□□ -1.29
SFPQ-203ENST00000466213 PIWIL2Q8TC59 973 aaKnown RBP6.98□□□□□ -1.29
SFPQ-203ENST00000466213 ESR2Q92731 530 aa6.98□□□□□ -1.29
SFPQ-203ENST00000466213 DPF3Q92784 378 aa6.98□□□□□ -1.29
SFPQ-203ENST00000466213 ZBED3Q96IU2 234 aaPredicted RBP6.98□□□□□ -1.29
SFPQ-203ENST00000466213 C22orf23Q9BZE7 217 aa6.98□□□□□ -1.29
SFPQ-203ENST00000466213 TMEM39BQ9GZU3 492 aa6.98□□□□□ -1.29
SFPQ-203ENST00000466213 SMURF1Q9HCE7 757 aa6.98□□□□□ -1.29
SFPQ-203ENST00000466213 AP5S1Q9NUS5 200 aa6.98□□□□□ -1.29
SFPQ-203ENST00000466213 MRGBPQ9NV56 204 aa6.98□□□□□ -1.29
SFPQ-203ENST00000466213 HERC5Q9UII4 1024 aaKnown RBP6.98□□□□□ -1.29
SFPQ-203ENST00000466213 LRCH1Q9Y2L9 728 aa6.98□□□□□ -1.29
SFPQ-203ENST00000466213 PCDHAC2Q9Y5I4 1007 aa6.98□□□□□ -1.29
SFPQ-203ENST00000466213 NPHP3-ACAD11A0A0J9YXS1 232 aa6.97□□□□□ -1.29
SFPQ-203ENST00000466213 SYNDIG1LA6NDD5 238 aa6.97□□□□□ -1.29
SFPQ-203ENST00000466213 TSPY2A6NKD2 308 aa6.97□□□□□ -1.29
SFPQ-203ENST00000466213 ZNF561-AS1K7EIQ3 104 aa6.97□□□□□ -1.29
SFPQ-203ENST00000466213 IGF2BP3O00425 579 aaKnown RBP eCLIP6.97□□□□□ -1.29
SFPQ-203ENST00000466213 RANBP6O60518 1105 aaKnown RBP6.97□□□□□ -1.29
SFPQ-203ENST00000466213 TIPRLO75663 272 aa6.97□□□□□ -1.29
SFPQ-203ENST00000466213 TOMM70O94826 608 aa6.97□□□□□ -1.29
SFPQ-203ENST00000466213 SYPP08247 313 aa6.97□□□□□ -1.29
SFPQ-203ENST00000466213 PAMP19021 973 aa6.97□□□□□ -1.29
SFPQ-203ENST00000466213 XPAP23025 273 aaPredicted RBP6.97□□□□□ -1.29
SFPQ-203ENST00000466213 GRK3P35626 688 aa6.97□□□□□ -1.29
SFPQ-203ENST00000466213 GPR3P46089 330 aa6.97□□□□□ -1.29
SFPQ-203ENST00000466213 NAP1L1P55209 391 aaKnown RBP6.97□□□□□ -1.29
SFPQ-203ENST00000466213 JAM2P57087 298 aa6.97□□□□□ -1.29
SFPQ-203ENST00000466213 HAND2P61296 217 aa6.97□□□□□ -1.29
SFPQ-203ENST00000466213 PTH1RQ03431 593 aa6.97□□□□□ -1.29
SFPQ-203ENST00000466213 CACNB2Q08289 660 aaPredicted RBP6.97□□□□□ -1.29
SFPQ-203ENST00000466213 FAM47CQ5HY64 1035 aa6.97□□□□□ -1.29
SFPQ-203ENST00000466213 AKNAD1Q5T1N1 836 aa6.97□□□□□ -1.29
SFPQ-203ENST00000466213 HECTD3Q5T447 861 aa6.97□□□□□ -1.29
SFPQ-203ENST00000466213 C12orf60Q5U649 245 aa6.97□□□□□ -1.29
SFPQ-203ENST00000466213 ZNF787Q6DD87 383 aa6.97□□□□□ -1.29
SFPQ-203ENST00000466213 TMCO3Q6UWJ1 677 aa6.97□□□□□ -1.29
SFPQ-203ENST00000466213 SDCCAG8Q86SQ7 713 aaPredicted RBP6.97□□□□□ -1.29
SFPQ-203ENST00000466213 OSTM1Q86WC4 334 aa6.97□□□□□ -1.29
SFPQ-203ENST00000466213 IQCA1Q86XH1 822 aa6.97□□□□□ -1.29
SFPQ-203ENST00000466213 KSR1Q8IVT5 923 aa6.97□□□□□ -1.29
SFPQ-203ENST00000466213 TMEM52Q8NDY8 209 aa6.97□□□□□ -1.29
SFPQ-203ENST00000466213 NCOA7Q8NI08 942 aa6.97□□□□□ -1.29
SFPQ-203ENST00000466213 IPCEF1Q8WWN9 437 aaPredicted RBP6.97□□□□□ -1.29
SFPQ-203ENST00000466213 CCDC17Q96LX7 622 aa6.97□□□□□ -1.29
SFPQ-203ENST00000466213 RMDN3Q96TC7 470 aa6.97□□□□□ -1.29
SFPQ-203ENST00000466213 JAM3Q9BX67 310 aa6.97□□□□□ -1.29
SFPQ-203ENST00000466213 ZNF341Q9BYN7 854 aa6.97□□□□□ -1.29
SFPQ-203ENST00000466213 WDR12Q9GZL7 423 aaKnown RBP6.97□□□□□ -1.29
SFPQ-203ENST00000466213 LSG1Q9H089 658 aaKnown RBP6.97□□□□□ -1.29
SFPQ-203ENST00000466213 PLEKHA5Q9HAU0 1116 aa6.97□□□□□ -1.29
SFPQ-203ENST00000466213 ARFGAP3Q9NP61 516 aa6.97□□□□□ -1.29
SFPQ-203ENST00000466213 ZNF281Q9Y2X9 895 aa6.97□□□□□ -1.29
SFPQ-203ENST00000466213 ZMYM6O95789 1325 aa6.97□□□□□ -1.29
SFPQ-203ENST00000466213 TRIM75PA6NK02 468 aa6.96□□□□□ -1.3
SFPQ-203ENST00000466213 TMEM110-MUSTN1A8MSY1 372 aa6.96□□□□□ -1.3
SFPQ-203ENST00000466213 FAM47E-STBD1D6RA91 191 aa6.96□□□□□ -1.3
SFPQ-203ENST00000466213 FOXN3O00409 490 aaPredicted RBP6.96□□□□□ -1.3
SFPQ-203ENST00000466213 SLC27A2O14975 620 aa6.96□□□□□ -1.3
SFPQ-203ENST00000466213 TSPY3P0CV98 308 aa6.96□□□□□ -1.3
SFPQ-203ENST00000466213 TSPY8P0CW00 308 aa6.96□□□□□ -1.3
SFPQ-203ENST00000466213 HSPA6P17066 643 aa6.96□□□□□ -1.3
SFPQ-203ENST00000466213 SLC9A1P19634 815 aa6.96□□□□□ -1.3
SFPQ-203ENST00000466213 HSPA4P34932 840 aa6.96□□□□□ -1.3
SFPQ-203ENST00000466213 BCL6P41182 706 aa6.96□□□□□ -1.3
SFPQ-203ENST00000466213 USP14P54578 494 aa6.96□□□□□ -1.3
SFPQ-203ENST00000466213 SCAND1P57086 179 aa6.96□□□□□ -1.3
SFPQ-203ENST00000466213 PRKG1Q13976 671 aa6.96□□□□□ -1.3
SFPQ-203ENST00000466213 PDCD1Q15116 288 aa6.96□□□□□ -1.3
SFPQ-203ENST00000466213 ARHGAP44Q17R89 818 aa6.96□□□□□ -1.3
SFPQ-203ENST00000466213 CERKLQ49MI3 558 aaPredicted RBP6.96□□□□□ -1.3
SFPQ-203ENST00000466213 OGFOD3Q6PK18 319 aa6.96□□□□□ -1.3
SFPQ-203ENST00000466213 ZPBP2Q6X784 338 aa6.96□□□□□ -1.3
SFPQ-203ENST00000466213 SYNE3Q6ZMZ3 975 aa6.96□□□□□ -1.3
SFPQ-203ENST00000466213 RTL10Q7L3V2 364 aa6.96□□□□□ -1.3
SFPQ-203ENST00000466213 MIGA2Q7L4E1 593 aa6.96□□□□□ -1.3
SFPQ-203ENST00000466213 RASGRP2Q7LDG7 609 aa6.96□□□□□ -1.3
SFPQ-203ENST00000466213 MSANTD4Q8NCY6 345 aa6.96□□□□□ -1.3
SFPQ-203ENST00000466213 LMBR1Q8WVP7 490 aa6.96□□□□□ -1.3
SFPQ-203ENST00000466213 UTP4Q969X6 686 aaKnown RBP6.96□□□□□ -1.3
SFPQ-203ENST00000466213 FERMT2Q96AC1 680 aa6.96□□□□□ -1.3
SFPQ-203ENST00000466213 CDCA5Q96FF9 252 aa6.96□□□□□ -1.3
SFPQ-203ENST00000466213 PTCHD1Q96NR3 888 aa6.96□□□□□ -1.3
SFPQ-203ENST00000466213 FAM193BQ96PV7 902 aaPredicted RBP6.96□□□□□ -1.3
SFPQ-203ENST00000466213 KCNJ15Q99712 375 aa6.96□□□□□ -1.3
SFPQ-203ENST00000466213 UBAC1Q9BSL1 405 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms