RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 ZNF677Q86XU0 584 aa16.8■□□□□ 0.28
PTPN11-201ENST00000351677 KCTD17Q8N5Z5 321 aa16.8■□□□□ 0.28
PTPN11-201ENST00000351677 MED15Q96RN5 788 aa16.8■□□□□ 0.28
PTPN11-201ENST00000351677 ZSWIM1Q9BR11 485 aa16.8■□□□□ 0.28
PTPN11-201ENST00000351677 C3orf70A6NLC5 250 aaPredicted RBP16.79■□□□□ 0.28
PTPN11-201ENST00000351677 DPEP1P16444 411 aa16.79■□□□□ 0.28
PTPN11-201ENST00000351677 TCF7P36402 384 aaPredicted RBP16.79■□□□□ 0.28
PTPN11-201ENST00000351677 ORC1Q13415 861 aa16.79■□□□□ 0.28
PTPN11-201ENST00000351677 DCAF4L1Q3SXM0 396 aa16.79■□□□□ 0.28
PTPN11-201ENST00000351677 ATG4AQ8WYN0 398 aa16.79■□□□□ 0.28
PTPN11-201ENST00000351677 FUT8Q9BYC5 575 aa16.79■□□□□ 0.28
PTPN11-201ENST00000351677 MROH2AA6NES4 1674 aa16.79■□□□□ 0.28
PTPN11-201ENST00000351677 EEF2KO00418 725 aaKnown RBP16.79■□□□□ 0.28
PTPN11-201ENST00000351677 TNPO2O14787 897 aaKnown RBP16.79■□□□□ 0.28
PTPN11-201ENST00000351677 DNAJC8O75937 253 aaPredicted RBP16.79■□□□□ 0.28
PTPN11-201ENST00000351677 RBP3P10745 1247 aa16.79■□□□□ 0.28
PTPN11-201ENST00000351677 MCF2P10911 925 aa16.79■□□□□ 0.28
PTPN11-201ENST00000351677 GPD1P21695 349 aa16.79■□□□□ 0.28
PTPN11-201ENST00000351677 STX3Q13277 289 aa16.79■□□□□ 0.28
PTPN11-201ENST00000351677 HACL1Q9UJ83 578 aa16.79■□□□□ 0.28
PTPN11-201ENST00000351677 MOSPD1Q9UJG1 213 aa16.79■□□□□ 0.28
PTPN11-201ENST00000351677 SREBF1P36956 1147 aa16.79■□□□□ 0.28
PTPN11-201ENST00000351677 CUL2Q13617 745 aa16.79■□□□□ 0.28
PTPN11-201ENST00000351677 IER5Q5VY09 327 aa16.79■□□□□ 0.28
PTPN11-201ENST00000351677 C3orf67Q6ZVT6 689 aa16.79■□□□□ 0.28
PTPN11-201ENST00000351677 ERP27Q96DN0 273 aa16.79■□□□□ 0.28
PTPN11-201ENST00000351677 ASIC4Q96FT7 647 aa16.79■□□□□ 0.28
PTPN11-201ENST00000351677 SGSM3Q96HU1 749 aa16.79■□□□□ 0.28
PTPN11-201ENST00000351677 POP1Q99575 1024 aaKnown RBP16.79■□□□□ 0.28
PTPN11-201ENST00000351677 FAM8A1Q9UBU6 413 aa16.79■□□□□ 0.28
PTPN11-201ENST00000351677 TJP2Q9UDY2 1190 aa16.79■□□□□ 0.28
PTPN11-201ENST00000351677 MAGEB2O15479 319 aa16.79■□□□□ 0.28
PTPN11-201ENST00000351677 CENPCQ03188 943 aa16.79■□□□□ 0.28
PTPN11-201ENST00000351677 LRRC8EQ6NSJ5 796 aa16.79■□□□□ 0.28
PTPN11-201ENST00000351677 SCFD1Q8WVM8 642 aa16.79■□□□□ 0.28
PTPN11-201ENST00000351677 CARD9Q9H257 536 aa16.79■□□□□ 0.28
PTPN11-201ENST00000351677 MRPL40Q9NQ50 206 aaKnown RBP16.79■□□□□ 0.28
PTPN11-201ENST00000351677 ITGB3P05106 788 aa16.79■□□□□ 0.28
PTPN11-201ENST00000351677 HMBSP08397 361 aa16.79■□□□□ 0.28
PTPN11-201ENST00000351677 HIC1Q14526 733 aa16.79■□□□□ 0.28
PTPN11-201ENST00000351677 MTHFD1LQ6UB35 978 aa16.79■□□□□ 0.28
PTPN11-201ENST00000351677 ILDR1Q86SU0 546 aaPredicted RBP16.79■□□□□ 0.28
PTPN11-201ENST00000351677 RNF168Q8IYW5 571 aaPredicted RBP16.79■□□□□ 0.28
PTPN11-201ENST00000351677 ING2Q9H160 280 aa16.79■□□□□ 0.28
PTPN11-201ENST00000351677 EZH2Q15910 746 aaKnown RBP16.78■□□□□ 0.28
PTPN11-201ENST00000351677 LVRNQ6Q4G3 990 aa16.78■□□□□ 0.28
PTPN11-201ENST00000351677 KIF2BQ8N4N8 673 aa16.78■□□□□ 0.28
PTPN11-201ENST00000351677 HPDLQ96IR7 371 aa16.78■□□□□ 0.28
PTPN11-201ENST00000351677 GTF3C4Q9UKN8 822 aa16.78■□□□□ 0.28
PTPN11-201ENST00000351677 ESRRBO95718 433 aa16.78■□□□□ 0.28
PTPN11-201ENST00000351677 NFKBIAP25963 317 aa16.78■□□□□ 0.28
PTPN11-201ENST00000351677 LBRQ14739 615 aaKnown RBP16.78■□□□□ 0.28
PTPN11-201ENST00000351677 COBLL1Q53SF7 1204 aa16.78■□□□□ 0.28
PTPN11-201ENST00000351677 TRPM8Q7Z2W7 1104 aa16.78■□□□□ 0.28
PTPN11-201ENST00000351677 ICA1LQ8NDH6 482 aa16.78■□□□□ 0.28
PTPN11-201ENST00000351677 TRIM62Q9BVG3 475 aa16.78■□□□□ 0.28
PTPN11-201ENST00000351677 ROPN1BQ9BZX4 212 aaPredicted RBP16.78■□□□□ 0.28
PTPN11-201ENST00000351677 RSAD1Q9HA92 442 aa16.78■□□□□ 0.28
PTPN11-201ENST00000351677 ROPN1Q9HAT0 212 aaPredicted RBP16.78■□□□□ 0.28
PTPN11-201ENST00000351677 LRRIQ3A6PVS8 624 aaPredicted RBP16.78■□□□□ 0.28
PTPN11-201ENST00000351677 SETSIPP0DME0 302 aa16.78■□□□□ 0.28
PTPN11-201ENST00000351677 CAP2P40123 477 aa16.78■□□□□ 0.28
PTPN11-201ENST00000351677 PTGISQ16647 500 aa16.78■□□□□ 0.28
PTPN11-201ENST00000351677 DCAF6Q58WW2 860 aa16.78■□□□□ 0.28
PTPN11-201ENST00000351677 CEP70Q8NHQ1 597 aa16.78■□□□□ 0.28
PTPN11-201ENST00000351677 RANBP17Q9H2T7 1088 aaKnown RBP16.78■□□□□ 0.28
PTPN11-201ENST00000351677 IRAK4Q9NWZ3 460 aa16.78■□□□□ 0.28
PTPN11-201ENST00000351677 ARHGAP20Q9P2F6 1191 aa16.78■□□□□ 0.28
PTPN11-201ENST00000351677 CENPPQ6IPU0 288 aa16.78■□□□□ 0.28
PTPN11-201ENST00000351677 IL17RBQ9NRM6 502 aa16.78■□□□□ 0.28
PTPN11-201ENST00000351677 PAK5Q9P286 719 aa16.78■□□□□ 0.28
PTPN11-201ENST00000351677 SLIT1O75093 1534 aa16.78■□□□□ 0.28
PTPN11-201ENST00000351677 C6orf222P0C671 652 aaPredicted RBP16.78■□□□□ 0.28
PTPN11-201ENST00000351677 GYS1P13807 737 aa16.78■□□□□ 0.28
PTPN11-201ENST00000351677 SLC7A14Q8TBB6 771 aa16.78■□□□□ 0.28
PTPN11-201ENST00000351677 GPRASP2Q96D09 838 aa16.78■□□□□ 0.28
PTPN11-201ENST00000351677 DDTLA6NHG4 134 aaPredicted RBP16.77■□□□□ 0.28
PTPN11-201ENST00000351677 ARHGDIAP52565 204 aa16.77■□□□□ 0.28
PTPN11-201ENST00000351677 ELMOD1Q8N336 334 aa16.77■□□□□ 0.28
PTPN11-201ENST00000351677 ERAP1Q9NZ08 941 aa16.77■□□□□ 0.28
PTPN11-201ENST00000351677 AKAP3O75969 853 aa16.77■□□□□ 0.28
PTPN11-201ENST00000351677 MAPK7Q13164 816 aa16.77■□□□□ 0.28
PTPN11-201ENST00000351677 USP10Q14694 798 aaKnown RBP16.77■□□□□ 0.28
PTPN11-201ENST00000351677 RABGAP1LQ5R372 815 aa16.77■□□□□ 0.28
PTPN11-201ENST00000351677 ANO5Q75V66 913 aa16.77■□□□□ 0.28
PTPN11-201ENST00000351677 ATPAF2Q8N5M1 289 aa16.77■□□□□ 0.28
PTPN11-201ENST00000351677 CHST13Q8NET6 341 aa16.77■□□□□ 0.28
PTPN11-201ENST00000351677 ZNF507Q8TCN5 953 aa16.77■□□□□ 0.28
PTPN11-201ENST00000351677 ZDHHC15Q96MV8 337 aa16.77■□□□□ 0.28
PTPN11-201ENST00000351677 OSGEPQ9NPF4 335 aa16.77■□□□□ 0.28
PTPN11-201ENST00000351677 PRMT7Q9NVM4 692 aaPredicted RBP16.77■□□□□ 0.28
PTPN11-201ENST00000351677 SLC13A4Q9UKG4 626 aa16.77■□□□□ 0.28
PTPN11-201ENST00000351677 AGLP35573 1532 aa16.77■□□□□ 0.28
PTPN11-201ENST00000351677 NLRP11P59045 1033 aaKnown RBP16.77■□□□□ 0.28
PTPN11-201ENST00000351677 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.77■□□□□ 0.28
PTPN11-201ENST00000351677 NPTXRO95502 500 aa16.77■□□□□ 0.27
PTPN11-201ENST00000351677 GFAPP14136 432 aa16.77■□□□□ 0.27
PTPN11-201ENST00000351677 SNAPC2Q13487 334 aa16.77■□□□□ 0.27
PTPN11-201ENST00000351677 PCSK7Q16549 785 aa16.77■□□□□ 0.27
PTPN11-201ENST00000351677 ZNF571Q7Z3V5 609 aaPredicted RBP16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms