RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 MMRN2Q9H8L6 949 aa8.37□□□□□ -1.07
CNOT4-201ENST00000315544 FAM114A2Q9NRY5 505 aa8.37□□□□□ -1.07
CNOT4-201ENST00000315544 OGDHLQ9ULD0 1010 aa8.37□□□□□ -1.07
CNOT4-201ENST00000315544 DRG1Q9Y295 367 aaKnown RBP8.37□□□□□ -1.07
CNOT4-201ENST00000315544 ST14Q9Y5Y6 855 aa8.37□□□□□ -1.07
CNOT4-201ENST00000315544 KMT2EQ8IZD2 1858 aa8.36□□□□□ -1.07
CNOT4-201ENST00000315544 SCN5AQ14524 2016 aa8.36□□□□□ -1.07
CNOT4-201ENST00000315544 SPDYE16A6NNV3 312 aaPredicted RBP8.36□□□□□ -1.07
CNOT4-201ENST00000315544 CLIC2O15247 247 aa8.36□□□□□ -1.07
CNOT4-201ENST00000315544 PEX11AO75192 247 aa8.36□□□□□ -1.07
CNOT4-201ENST00000315544 MRPS5P82675 430 aaKnown RBP8.36□□□□□ -1.07
CNOT4-201ENST00000315544 CDK18Q07002 472 aa8.36□□□□□ -1.07
CNOT4-201ENST00000315544 KCNJ11Q14654 390 aa8.36□□□□□ -1.07
CNOT4-201ENST00000315544 USP41Q3LFD5 358 aa8.36□□□□□ -1.07
CNOT4-201ENST00000315544 ACCSLQ4AC99 568 aa8.36□□□□□ -1.07
CNOT4-201ENST00000315544 HERC4Q5GLZ8 1057 aaPredicted RBP8.36□□□□□ -1.07
CNOT4-201ENST00000315544 SV2AQ7L0J3 742 aa8.36□□□□□ -1.07
CNOT4-201ENST00000315544 PIAS4Q8N2W9 510 aaPredicted RBP8.36□□□□□ -1.07
CNOT4-201ENST00000315544 NT5C3BQ969T7 300 aa8.36□□□□□ -1.07
CNOT4-201ENST00000315544 VOPP1Q96AW1 172 aa8.36□□□□□ -1.07
CNOT4-201ENST00000315544 TMX4Q9H1E5 349 aaPredicted RBP8.36□□□□□ -1.07
CNOT4-201ENST00000315544 LRMDAQ9H2I8 198 aa8.36□□□□□ -1.07
CNOT4-201ENST00000315544 TOPORSQ9NS56 1045 aaPredicted RBP8.36□□□□□ -1.07
CNOT4-201ENST00000315544 NKX1-2Q9UD57 310 aaPredicted RBP8.36□□□□□ -1.07
CNOT4-201ENST00000315544 FEM1BQ9UK73 627 aa8.36□□□□□ -1.07
CNOT4-201ENST00000315544 CCT8L1PA6NM43 557 aa8.36□□□□□ -1.07
CNOT4-201ENST00000315544 IPO5O00410 1097 aaKnown RBP8.36□□□□□ -1.07
CNOT4-201ENST00000315544 KLF11O14901 512 aa8.36□□□□□ -1.07
CNOT4-201ENST00000315544 CHN1P15882 459 aa8.36□□□□□ -1.07
CNOT4-201ENST00000315544 VAMP7P51809 220 aa8.36□□□□□ -1.07
CNOT4-201ENST00000315544 PMS2P54278 862 aa8.36□□□□□ -1.07
CNOT4-201ENST00000315544 MSLNQ13421 630 aaPredicted RBP8.36□□□□□ -1.07
CNOT4-201ENST00000315544 FASTKD3Q14CZ7 662 aaKnown RBP8.36□□□□□ -1.07
CNOT4-201ENST00000315544 MTFR1Q15390 333 aa8.36□□□□□ -1.07
CNOT4-201ENST00000315544 ZBTB6Q15916 424 aa8.36□□□□□ -1.07
CNOT4-201ENST00000315544 PARP6Q2NL67 630 aa8.36□□□□□ -1.07
CNOT4-201ENST00000315544 MAVSQ7Z434 540 aa8.36□□□□□ -1.07
CNOT4-201ENST00000315544 TICAM1Q8IUC6 712 aa8.36□□□□□ -1.07
CNOT4-201ENST00000315544 ZNF280CQ8ND82 737 aa8.36□□□□□ -1.07
CNOT4-201ENST00000315544 PTPRN2Q92932 1015 aa8.36□□□□□ -1.07
CNOT4-201ENST00000315544 EMID1Q96A84 441 aaPredicted RBP8.36□□□□□ -1.07
CNOT4-201ENST00000315544 SGSM3Q96HU1 749 aa8.36□□□□□ -1.07
CNOT4-201ENST00000315544 FAM84AQ96KN4 292 aa8.36□□□□□ -1.07
CNOT4-201ENST00000315544 PWWP2AQ96N64 755 aa8.36□□□□□ -1.07
CNOT4-201ENST00000315544 PEBP4Q96S96 227 aa8.36□□□□□ -1.07
CNOT4-201ENST00000315544 PRDM16Q9HAZ2 1276 aa8.36□□□□□ -1.07
CNOT4-201ENST00000315544 ADAM22Q9P0K1 906 aa8.36□□□□□ -1.07
CNOT4-201ENST00000315544 MTCL1Q9Y4B5 1905 aaKnown RBP8.36□□□□□ -1.07
CNOT4-201ENST00000315544 ALOX15BO15296 676 aa8.36□□□□□ -1.07
CNOT4-201ENST00000315544 DLDP09622 509 aaKnown RBP8.36□□□□□ -1.07
CNOT4-201ENST00000315544 ICA1Q05084 483 aa8.36□□□□□ -1.07
CNOT4-201ENST00000315544 GNL2Q13823 731 aaKnown RBP8.36□□□□□ -1.07
CNOT4-201ENST00000315544 XKR4Q5GH76 650 aa8.36□□□□□ -1.07
CNOT4-201ENST00000315544 COL13A1Q5TAT6 717 aaPredicted RBP8.36□□□□□ -1.07
CNOT4-201ENST00000315544 DAB2IPQ5VWQ8 1189 aa8.36□□□□□ -1.07
CNOT4-201ENST00000315544 TTC19Q6DKK2 380 aaPredicted RBP8.36□□□□□ -1.07
CNOT4-201ENST00000315544 C8orf82Q6P1X6 216 aaPredicted RBP8.36□□□□□ -1.07
CNOT4-201ENST00000315544 FBXO46Q6PJ61 603 aaPredicted RBP8.36□□□□□ -1.07
CNOT4-201ENST00000315544 FASTKD5Q7L8L6 764 aaKnown RBP8.36□□□□□ -1.07
CNOT4-201ENST00000315544 LRRC34Q8IZ02 419 aa8.36□□□□□ -1.07
CNOT4-201ENST00000315544 CMASQ8NFW8 434 aaPredicted RBP8.36□□□□□ -1.07
CNOT4-201ENST00000315544 SLITRK1Q96PX8 696 aa8.36□□□□□ -1.07
CNOT4-201ENST00000315544 CXCL16Q9H2A7 254 aa8.36□□□□□ -1.07
CNOT4-201ENST00000315544 ARHGEF10LQ9HCE6 1279 aa8.36□□□□□ -1.07
CNOT4-201ENST00000315544 GPRC5CQ9NQ84 441 aa8.36□□□□□ -1.07
CNOT4-201ENST00000315544 TMOD4Q9NZQ9 345 aa8.36□□□□□ -1.07
CNOT4-201ENST00000315544 PARP2Q9UGN5 583 aa8.36□□□□□ -1.07
CNOT4-201ENST00000315544 TEX264Q9Y6I9 313 aa8.36□□□□□ -1.07
CNOT4-201ENST00000315544 VWA5AO00534 786 aa8.35□□□□□ -1.07
CNOT4-201ENST00000315544 KCNK3O14649 394 aa8.35□□□□□ -1.07
CNOT4-201ENST00000315544 BUD23O43709 281 aaKnown RBP8.35□□□□□ -1.07
CNOT4-201ENST00000315544 ATXN8OSP0DMR3 200 aa8.35□□□□□ -1.07
CNOT4-201ENST00000315544 STAT1P42224 750 aa8.35□□□□□ -1.07
CNOT4-201ENST00000315544 GCLCP48506 637 aaPredicted RBP8.35□□□□□ -1.07
CNOT4-201ENST00000315544 STAT2P52630 851 aa8.35□□□□□ -1.07
CNOT4-201ENST00000315544 ABCB5Q2M3G0 1257 aa8.35□□□□□ -1.07
CNOT4-201ENST00000315544 KCTD16Q68DU8 428 aa8.35□□□□□ -1.07
CNOT4-201ENST00000315544 CCDC62Q6P9F0 684 aa8.35□□□□□ -1.07
CNOT4-201ENST00000315544 ADGRD1Q6QNK2 874 aa8.35□□□□□ -1.07
CNOT4-201ENST00000315544 FAM43BQ6ZT52 329 aaPredicted RBP8.35□□□□□ -1.07
CNOT4-201ENST00000315544 CYS1Q717R9 158 aa8.35□□□□□ -1.07
CNOT4-201ENST00000315544 TRMT10CQ7L0Y3 403 aaKnown RBP8.35□□□□□ -1.07
CNOT4-201ENST00000315544 ZNF677Q86XU0 584 aa8.35□□□□□ -1.07
CNOT4-201ENST00000315544 VTI1AQ96AJ9 217 aa8.35□□□□□ -1.07
CNOT4-201ENST00000315544 GSTTP1A0A1W2PQM5 241 aa8.35□□□□□ -1.07
CNOT4-201ENST00000315544 I6L893 689 aaPredicted RBP8.35□□□□□ -1.07
CNOT4-201ENST00000315544 CETN3O15182 167 aa8.35□□□□□ -1.07
CNOT4-201ENST00000315544 WDR46O15213 610 aaKnown RBP8.35□□□□□ -1.07
CNOT4-201ENST00000315544 AKR1B10O60218 316 aa8.35□□□□□ -1.07
CNOT4-201ENST00000315544 ITGAVP06756 1048 aa8.35□□□□□ -1.07
CNOT4-201ENST00000315544 ERCC3P19447 782 aa8.35□□□□□ -1.07
CNOT4-201ENST00000315544 CCDC40Q4G0X9 1142 aa8.35□□□□□ -1.07
CNOT4-201ENST00000315544 RABGAP1LQ5R372 815 aa8.35□□□□□ -1.07
CNOT4-201ENST00000315544 LHX8Q68G74 356 aa8.35□□□□□ -1.07
CNOT4-201ENST00000315544 MIS18BP1Q6P0N0 1132 aa8.35□□□□□ -1.07
CNOT4-201ENST00000315544 SYDE1Q6ZW31 735 aaPredicted RBP8.35□□□□□ -1.07
CNOT4-201ENST00000315544 INTS8Q75QN2 995 aaKnown RBP8.35□□□□□ -1.07
CNOT4-201ENST00000315544 NCAPG2Q86XI2 1143 aa8.35□□□□□ -1.07
CNOT4-201ENST00000315544 RIOX2Q8IUF8 465 aa8.35□□□□□ -1.07
CNOT4-201ENST00000315544 CCDC60Q8IWA6 550 aaPredicted RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms