RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 NT5C1AQ9BXI3 368 aa11.61□□□□□ -0.55
KNOP1-201ENST00000219837 DPP3Q9NY33 737 aa11.61□□□□□ -0.55
KNOP1-201ENST00000219837 ADCY3O60266 1144 aa11.61□□□□□ -0.55
KNOP1-201ENST00000219837 ALDH1A2O94788 518 aa11.61□□□□□ -0.55
KNOP1-201ENST00000219837 WEE2P0C1S8 567 aa11.61□□□□□ -0.55
KNOP1-201ENST00000219837 BRD2P25440 801 aaKnown RBP11.61□□□□□ -0.55
KNOP1-201ENST00000219837 TCF7P36402 384 aaPredicted RBP11.61□□□□□ -0.55
KNOP1-201ENST00000219837 HUNKP57058 714 aa11.61□□□□□ -0.55
KNOP1-201ENST00000219837 TP53BP2Q13625 1128 aa11.61□□□□□ -0.55
KNOP1-201ENST00000219837 SHC4Q6S5L8 630 aa11.61□□□□□ -0.55
KNOP1-201ENST00000219837 CPB2Q96IY4 423 aa11.61□□□□□ -0.55
KNOP1-201ENST00000219837 RAB6BQ9NRW1 208 aa11.61□□□□□ -0.55
KNOP1-201ENST00000219837 MAP10Q9P2G4 905 aa11.61□□□□□ -0.55
KNOP1-201ENST00000219837 TULP4Q9NRJ4 1543 aa11.6□□□□□ -0.55
KNOP1-201ENST00000219837 TTLL13PA6NNM8 815 aa11.6□□□□□ -0.55
KNOP1-201ENST00000219837 GSNP06396 782 aa11.6□□□□□ -0.55
KNOP1-201ENST00000219837 ZC2HC1CQ53FD0 456 aaPredicted RBP11.6□□□□□ -0.55
KNOP1-201ENST00000219837 C16orf89Q6UX73 402 aa11.6□□□□□ -0.55
KNOP1-201ENST00000219837 CLEC10AQ8IUN9 316 aa11.6□□□□□ -0.55
KNOP1-201ENST00000219837 NEDD1Q8NHV4 660 aa11.6□□□□□ -0.55
KNOP1-201ENST00000219837 TMEM39BQ9GZU3 492 aa11.6□□□□□ -0.55
KNOP1-201ENST00000219837 NSMCE4AQ9NXX6 385 aa11.6□□□□□ -0.55
KNOP1-201ENST00000219837 GGT7Q9UJ14 662 aa11.6□□□□□ -0.55
KNOP1-201ENST00000219837 IQGAP3Q86VI3 1631 aa11.6□□□□□ -0.55
KNOP1-201ENST00000219837 PNPLA7Q6ZV29 1317 aa11.6□□□□□ -0.55
KNOP1-201ENST00000219837 TTC26A0AVF1 554 aa11.6□□□□□ -0.55
KNOP1-201ENST00000219837 TCP11X1B4DZS4 312 aa11.6□□□□□ -0.55
KNOP1-201ENST00000219837 GTF2H1P32780 548 aa11.6□□□□□ -0.55
KNOP1-201ENST00000219837 GTF2A2P52657 109 aa11.6□□□□□ -0.55
KNOP1-201ENST00000219837 ZNF543Q08ER8 600 aa11.6□□□□□ -0.55
KNOP1-201ENST00000219837 MAPRE1Q15691 268 aaKnown RBP11.6□□□□□ -0.55
KNOP1-201ENST00000219837 PLEKHM3Q6ZWE6 761 aa11.6□□□□□ -0.55
KNOP1-201ENST00000219837 CLEC4FQ8N1N0 589 aa11.6□□□□□ -0.55
KNOP1-201ENST00000219837 ATP6V0D2Q8N8Y2 350 aa11.6□□□□□ -0.55
KNOP1-201ENST00000219837 ATP6V1G3Q96LB4 118 aa11.6□□□□□ -0.55
KNOP1-201ENST00000219837 IL1RL2Q9HB29 575 aa11.6□□□□□ -0.55
KNOP1-201ENST00000219837 NFKBIL1Q9UBC1 381 aaPredicted RBP11.6□□□□□ -0.55
KNOP1-201ENST00000219837 ZC3H7BQ9UGR2 993 aaKnown RBP11.6□□□□□ -0.55
KNOP1-201ENST00000219837 CHRM3P20309 590 aa11.6□□□□□ -0.55
KNOP1-201ENST00000219837 CHI3L1P36222 383 aaPredicted RBP11.6□□□□□ -0.55
KNOP1-201ENST00000219837 ALDH6A1Q02252 535 aaKnown RBP11.6□□□□□ -0.55
KNOP1-201ENST00000219837 HIST2H2ACQ16777 129 aaPredicted RBP11.6□□□□□ -0.55
KNOP1-201ENST00000219837 HIST2H2AA3Q6FI13 130 aa11.6□□□□□ -0.55
KNOP1-201ENST00000219837 BTNL9Q6UXG8 535 aa11.6□□□□□ -0.55
KNOP1-201ENST00000219837 MRPL1Q9BYD6 325 aaKnown RBP11.6□□□□□ -0.55
KNOP1-201ENST00000219837 STK33Q9BYT3 514 aa11.6□□□□□ -0.55
KNOP1-201ENST00000219837 STN1Q9H668 368 aaKnown RBP11.6□□□□□ -0.55
KNOP1-201ENST00000219837 AMACRQ9UHK6 382 aa11.6□□□□□ -0.55
KNOP1-201ENST00000219837 CHUKO15111 745 aa11.6□□□□□ -0.55
KNOP1-201ENST00000219837 ATMINO43313 823 aaPredicted RBP11.6□□□□□ -0.55
KNOP1-201ENST00000219837 ITGB3P05106 788 aa11.6□□□□□ -0.55
KNOP1-201ENST00000219837 MBL2P11226 248 aaPredicted RBP11.6□□□□□ -0.55
KNOP1-201ENST00000219837 FMO5P49326 533 aa11.6□□□□□ -0.55
KNOP1-201ENST00000219837 CYTH1Q15438 398 aa11.6□□□□□ -0.55
KNOP1-201ENST00000219837 CHMP1BQ7LBR1 199 aa11.6□□□□□ -0.55
KNOP1-201ENST00000219837 CHSY1Q86X52 802 aa11.6□□□□□ -0.55
KNOP1-201ENST00000219837 GUF1Q8N442 669 aaKnown RBP11.6□□□□□ -0.55
KNOP1-201ENST00000219837 SMAD5Q99717 465 aaKnown RBP11.6□□□□□ -0.55
KNOP1-201ENST00000219837 TSEN34Q9BSV6 310 aaKnown RBP11.6□□□□□ -0.55
KNOP1-201ENST00000219837 COLEC11Q9BWP8 271 aa11.6□□□□□ -0.55
KNOP1-201ENST00000219837 NFKBIZQ9BYH8 718 aa11.6□□□□□ -0.55
KNOP1-201ENST00000219837 ERAP1Q9NZ08 941 aa11.6□□□□□ -0.55
KNOP1-201ENST00000219837 RAD23BP54727 409 aa11.6□□□□□ -0.55
KNOP1-201ENST00000219837 STAT4Q14765 748 aa11.6□□□□□ -0.55
KNOP1-201ENST00000219837 CENPPQ6IPU0 288 aa11.6□□□□□ -0.55
KNOP1-201ENST00000219837 PLEKHA8Q96JA3 519 aa11.6□□□□□ -0.55
KNOP1-201ENST00000219837 MXRA8Q9BRK3 442 aa11.6□□□□□ -0.55
KNOP1-201ENST00000219837 TRIM51Q9BSJ1 452 aa11.6□□□□□ -0.55
KNOP1-201ENST00000219837 PI4K2AQ9BTU6 479 aa11.6□□□□□ -0.55
KNOP1-201ENST00000219837 CACNA2D2Q9NY47 1150 aa11.6□□□□□ -0.55
KNOP1-201ENST00000219837 PSD3Q9NYI0 1048 aa11.6□□□□□ -0.55
KNOP1-201ENST00000219837 A2ML1A8K2U0 1454 aa11.59□□□□□ -0.55
KNOP1-201ENST00000219837 CLASP2O75122 1294 aaKnown RBP11.59□□□□□ -0.55
KNOP1-201ENST00000219837 PNMA6AP0CW24 399 aaPredicted RBP11.59□□□□□ -0.55
KNOP1-201ENST00000219837 NUMBP49757 651 aa11.59□□□□□ -0.55
KNOP1-201ENST00000219837 NEK2P51955 445 aa11.59□□□□□ -0.55
KNOP1-201ENST00000219837 ZNF200P98182 395 aaPredicted RBP11.59□□□□□ -0.55
KNOP1-201ENST00000219837 LONP2Q86WA8 852 aa11.59□□□□□ -0.55
KNOP1-201ENST00000219837 PLD3Q8IV08 490 aa11.59□□□□□ -0.55
KNOP1-201ENST00000219837 DPF3Q92784 378 aa11.59□□□□□ -0.55
KNOP1-201ENST00000219837 MAGEB10Q96LZ2 347 aaPredicted RBP11.59□□□□□ -0.55
KNOP1-201ENST00000219837 PHF20Q9BVI0 1012 aa11.59□□□□□ -0.55
KNOP1-201ENST00000219837 FBXO2Q9UK22 296 aaPredicted RBP11.59□□□□□ -0.55
KNOP1-201ENST00000219837 PRR12Q9ULL5 1215 aa11.59□□□□□ -0.55
KNOP1-201ENST00000219837 PLA2R1Q13018 1463 aa11.59□□□□□ -0.55
KNOP1-201ENST00000219837 RNF17Q9BXT8 1623 aaKnown RBP11.59□□□□□ -0.55
KNOP1-201ENST00000219837 ACADMP11310 421 aa11.59□□□□□ -0.55
KNOP1-201ENST00000219837 PMS1P54277 932 aaKnown RBP11.59□□□□□ -0.55
KNOP1-201ENST00000219837 MKRN4PQ13434 485 aaPredicted RBP11.59□□□□□ -0.55
KNOP1-201ENST00000219837 DEPDC1Q5TB30 811 aa11.59□□□□□ -0.55
KNOP1-201ENST00000219837 C16orf86Q6ZW13 317 aa11.59□□□□□ -0.55
KNOP1-201ENST00000219837 C1orf131Q8NDD1 294 aaKnown RBP11.59□□□□□ -0.55
KNOP1-201ENST00000219837 WWP1Q9H0M0 922 aa11.59□□□□□ -0.55
KNOP1-201ENST00000219837 CRLS1Q9UJA2 301 aa11.59□□□□□ -0.55
KNOP1-201ENST00000219837 DBR1Q9UK59 544 aaKnown RBP11.59□□□□□ -0.55
KNOP1-201ENST00000219837 SLC39A10Q9ULF5 831 aa11.59□□□□□ -0.55
KNOP1-201ENST00000219837 HEATR9A2RTY3 570 aa11.59□□□□□ -0.55
KNOP1-201ENST00000219837 WDR47O94967 919 aa11.59□□□□□ -0.55
KNOP1-201ENST00000219837 NDUFB10O96000 172 aa11.59□□□□□ -0.55
KNOP1-201ENST00000219837 ENO3P13929 434 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms