RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 EPC1Q9H2F5 836 aa5.4□□□□□ -1.54
CASC4-206ENST00000558847 MRPL46Q9H2W6 279 aaKnown RBP5.4□□□□□ -1.54
CASC4-206ENST00000558847 C12orf65Q9H3J6 166 aaKnown RBP5.4□□□□□ -1.54
CASC4-206ENST00000558847 ATP6V0A4Q9HBG4 840 aa5.4□□□□□ -1.54
CASC4-206ENST00000558847 SERHLQ9NQF3 203 aa5.4□□□□□ -1.54
CASC4-206ENST00000558847 FAM30AQ9NZY2 134 aa5.4□□□□□ -1.54
CASC4-206ENST00000558847 STAP2Q9UGK3 403 aa5.4□□□□□ -1.54
CASC4-206ENST00000558847 CPA4Q9UI42 421 aa5.4□□□□□ -1.54
CASC4-206ENST00000558847 LRCH1Q9Y2L9 728 aa5.4□□□□□ -1.54
CASC4-206ENST00000558847 TESMINQ9Y4I5 508 aa5.4□□□□□ -1.54
CASC4-206ENST00000558847 ACTL7AQ9Y615 435 aa5.4□□□□□ -1.54
CASC4-206ENST00000558847 ABHD14A-ACY1A0A1B0GW23 586 aa5.39□□□□□ -1.55
CASC4-206ENST00000558847 A0A1W2PRX2 142 aa5.39□□□□□ -1.55
CASC4-206ENST00000558847 F2RL2O00254 374 aa5.39□□□□□ -1.55
CASC4-206ENST00000558847 IL18RAPO95256 599 aa5.39□□□□□ -1.55
CASC4-206ENST00000558847 GNAI2P04899 355 aa5.39□□□□□ -1.55
CASC4-206ENST00000558847 THP07101 528 aa5.39□□□□□ -1.55
CASC4-206ENST00000558847 ALDH1A3P47895 512 aa5.39□□□□□ -1.55
CASC4-206ENST00000558847 PRIM2P49643 509 aa5.39□□□□□ -1.55
CASC4-206ENST00000558847 CASP5P51878 434 aa5.39□□□□□ -1.55
CASC4-206ENST00000558847 CHAF1AQ13111 956 aaPredicted RBP5.39□□□□□ -1.55
CASC4-206ENST00000558847 STK3Q13188 491 aa5.39□□□□□ -1.55
CASC4-206ENST00000558847 NRN1LQ496H8 165 aa5.39□□□□□ -1.55
CASC4-206ENST00000558847 ZNF783Q6ZMS7 281 aa5.39□□□□□ -1.55
CASC4-206ENST00000558847 PDSS2Q86YH6 399 aa5.39□□□□□ -1.55
CASC4-206ENST00000558847 BRI3BPQ8WY22 251 aa5.39□□□□□ -1.55
CASC4-206ENST00000558847 RIPOR3Q96MK2 946 aa5.39□□□□□ -1.55
CASC4-206ENST00000558847 MRI1Q9BV20 369 aa5.39□□□□□ -1.55
CASC4-206ENST00000558847 RSAD1Q9HA92 442 aa5.39□□□□□ -1.55
CASC4-206ENST00000558847 AFF4Q9UHB7 1163 aaKnown RBP5.39□□□□□ -1.55
CASC4-206ENST00000558847 ING1Q9UK53 422 aaPredicted RBP5.39□□□□□ -1.55
CASC4-206ENST00000558847 HDAC5Q9UQL6 1122 aa5.39□□□□□ -1.55
CASC4-206ENST00000558847 MED16Q9Y2X0 877 aa5.39□□□□□ -1.55
CASC4-206ENST00000558847 PCDHA1Q9Y5I3 950 aa5.39□□□□□ -1.55
CASC4-206ENST00000558847 ATRNL1Q5VV63 1379 aa5.39□□□□□ -1.55
CASC4-206ENST00000558847 UBE2QL1A1L167 161 aa5.38□□□□□ -1.55
CASC4-206ENST00000558847 NPIPB8E9PQR5 432 aa5.38□□□□□ -1.55
CASC4-206ENST00000558847 GRM6O15303 877 aa5.38□□□□□ -1.55
CASC4-206ENST00000558847 CREB3O43889 395 aa5.38□□□□□ -1.55
CASC4-206ENST00000558847 TCEA3O75764 348 aa5.38□□□□□ -1.55
CASC4-206ENST00000558847 HAUS5O94927 633 aa5.38□□□□□ -1.55
CASC4-206ENST00000558847 KITP10721 976 aa5.38□□□□□ -1.55
CASC4-206ENST00000558847 NPR1P16066 1061 aa5.38□□□□□ -1.55
CASC4-206ENST00000558847 COMTP21964 271 aa5.38□□□□□ -1.55
CASC4-206ENST00000558847 PIK3CBP42338 1070 aa5.38□□□□□ -1.55
CASC4-206ENST00000558847 KCNJ5P48544 419 aa5.38□□□□□ -1.55
CASC4-206ENST00000558847 SOX8P57073 446 aa5.38□□□□□ -1.55
CASC4-206ENST00000558847 CLRN1P58418 232 aa5.38□□□□□ -1.55
CASC4-206ENST00000558847 FMO1Q01740 532 aa5.38□□□□□ -1.55
CASC4-206ENST00000558847 FOXL1Q12952 345 aa5.38□□□□□ -1.55
CASC4-206ENST00000558847 DAG1Q14118 895 aa5.38□□□□□ -1.55
CASC4-206ENST00000558847 CCDC93Q567U6 631 aa5.38□□□□□ -1.55
CASC4-206ENST00000558847 PRR16Q569H4 304 aa5.38□□□□□ -1.55
CASC4-206ENST00000558847 HSP90AB4PQ58FF6 505 aa5.38□□□□□ -1.55
CASC4-206ENST00000558847 IZUMO3Q5VZ72 239 aa5.38□□□□□ -1.55
CASC4-206ENST00000558847 Q6ZSN1 163 aa5.38□□□□□ -1.55
CASC4-206ENST00000558847 DOK3Q7L591 496 aa5.38□□□□□ -1.55
CASC4-206ENST00000558847 POLNQ7Z5Q5 900 aa5.38□□□□□ -1.55
CASC4-206ENST00000558847 ZFP28Q8NHY6 868 aa5.38□□□□□ -1.55
CASC4-206ENST00000558847 STON2Q8WXE9 905 aa5.38□□□□□ -1.55
CASC4-206ENST00000558847 TNPO1Q92973 898 aaKnown RBP5.38□□□□□ -1.55
CASC4-206ENST00000558847 MRGPRX1Q96LB2 322 aa5.38□□□□□ -1.55
CASC4-206ENST00000558847 NT5C1BQ96P26 610 aa5.38□□□□□ -1.55
CASC4-206ENST00000558847 TRIM54Q9BYV2 358 aa5.38□□□□□ -1.55
CASC4-206ENST00000558847 BRD9Q9H8M2 597 aa5.38□□□□□ -1.55
CASC4-206ENST00000558847 TRMT13Q9NUP7 481 aaKnown RBP5.38□□□□□ -1.55
CASC4-206ENST00000558847 PLA2G3Q9NZ20 509 aa5.38□□□□□ -1.55
CASC4-206ENST00000558847 JKAMPQ9P055 326 aa5.38□□□□□ -1.55
CASC4-206ENST00000558847 PCDHA6Q9UN73 950 aa5.38□□□□□ -1.55
CASC4-206ENST00000558847 CORO2BQ9UQ03 480 aa5.38□□□□□ -1.55
CASC4-206ENST00000558847 RUVBL1Q9Y265 456 aaKnown RBP5.38□□□□□ -1.55
CASC4-206ENST00000558847 HOXA3O43365 443 aaPredicted RBP5.37□□□□□ -1.55
CASC4-206ENST00000558847 TBC1D4O60343 1298 aa5.37□□□□□ -1.55
CASC4-206ENST00000558847 SLC43A1O75387 559 aa5.37□□□□□ -1.55
CASC4-206ENST00000558847 IPO13O94829 963 aaKnown RBP5.37□□□□□ -1.55
CASC4-206ENST00000558847 CHEK2O96017 543 aa5.37□□□□□ -1.55
CASC4-206ENST00000558847 POMCP01189 267 aa5.37□□□□□ -1.55
CASC4-206ENST00000558847 RARBP10826 455 aa5.37□□□□□ -1.55
CASC4-206ENST00000558847 FPR1P21462 350 aa5.37□□□□□ -1.55
CASC4-206ENST00000558847 TNFSF4P23510 183 aa5.37□□□□□ -1.55
CASC4-206ENST00000558847 MGAT1P26572 445 aa5.37□□□□□ -1.55
CASC4-206ENST00000558847 SERPINB3P29508 390 aa5.37□□□□□ -1.55
CASC4-206ENST00000558847 MSX2P35548 267 aaPredicted RBP5.37□□□□□ -1.55
CASC4-206ENST00000558847 STT3AP46977 705 aa5.37□□□□□ -1.55
CASC4-206ENST00000558847 ZNF543Q08ER8 600 aa5.37□□□□□ -1.55
CASC4-206ENST00000558847 RAB32Q13637 225 aa5.37□□□□□ -1.55
CASC4-206ENST00000558847 FHL2Q14192 279 aa5.37□□□□□ -1.55
CASC4-206ENST00000558847 KIF22Q14807 665 aa5.37□□□□□ -1.55
CASC4-206ENST00000558847 PDCD2Q16342 344 aaPredicted RBP5.37□□□□□ -1.55
CASC4-206ENST00000558847 MFSD14BQ5SR56 506 aa5.37□□□□□ -1.55
CASC4-206ENST00000558847 FAM83BQ5T0W9 1011 aa5.37□□□□□ -1.55
CASC4-206ENST00000558847 XRRA1Q6P2D8 792 aa5.37□□□□□ -1.55
CASC4-206ENST00000558847 APBB1IPQ7Z5R6 666 aaPredicted RBP5.37□□□□□ -1.55
CASC4-206ENST00000558847 FAM83AQ86UY5 434 aa5.37□□□□□ -1.55
CASC4-206ENST00000558847 PPP1R3BQ86XI6 285 aa5.37□□□□□ -1.55
CASC4-206ENST00000558847 IPCEF1Q8WWN9 437 aaPredicted RBP5.37□□□□□ -1.55
CASC4-206ENST00000558847 NMD3Q96D46 503 aaKnown RBP5.37□□□□□ -1.55
CASC4-206ENST00000558847 EIF2AQ9BY44 585 aaKnown RBP5.37□□□□□ -1.55
CASC4-206ENST00000558847 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.37□□□□□ -1.55
CASC4-206ENST00000558847 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms