RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 CCNI2Q6ZMN8 369 aaPredicted RBP18.42■□□□□ 0.54
TMEM50B-210ENST00000542230 ACTRT1Q8TDG2 376 aa18.42■□□□□ 0.54
TMEM50B-210ENST00000542230 RNF14Q9UBS8 474 aa18.42■□□□□ 0.54
TMEM50B-210ENST00000542230 NRCAMQ92823 1304 aa18.42■□□□□ 0.54
TMEM50B-210ENST00000542230 MBLAC1A4D2B0 266 aaPredicted RBP18.42■□□□□ 0.54
TMEM50B-210ENST00000542230 NPTXRO95502 500 aa18.42■□□□□ 0.54
TMEM50B-210ENST00000542230 FGGP02679 453 aa18.42■□□□□ 0.54
TMEM50B-210ENST00000542230 TCEAL1Q15170 157 aa18.42■□□□□ 0.54
TMEM50B-210ENST00000542230 C8orf74Q6P047 294 aa18.42■□□□□ 0.54
TMEM50B-210ENST00000542230 MMS22LQ6ZRQ5 1243 aa18.42■□□□□ 0.54
TMEM50B-210ENST00000542230 FAM81BQ96LP2 452 aa18.42■□□□□ 0.54
TMEM50B-210ENST00000542230 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.42■□□□□ 0.546e-15■□□□□ 8.9
TMEM50B-210ENST00000542230 DDX47Q9H0S4 455 aaKnown RBP18.42■□□□□ 0.54
TMEM50B-210ENST00000542230 SMYD3Q9H7B4 428 aa18.42■□□□□ 0.54
TMEM50B-210ENST00000542230 MROH7Q68CQ1 1323 aa18.42■□□□□ 0.54
TMEM50B-210ENST00000542230 RRN3P2A6NIE6 340 aa18.41■□□□□ 0.54
TMEM50B-210ENST00000542230 RAD51CO43502 376 aa18.41■□□□□ 0.54
TMEM50B-210ENST00000542230 CENPCQ03188 943 aa18.41■□□□□ 0.54
TMEM50B-210ENST00000542230 SURF1Q15526 300 aa18.41■□□□□ 0.54
TMEM50B-210ENST00000542230 MON1BQ7L1V2 547 aa18.41■□□□□ 0.54
TMEM50B-210ENST00000542230 RASGEF1CQ8N431 466 aa18.41■□□□□ 0.54
TMEM50B-210ENST00000542230 TRIB2Q92519 343 aa18.41■□□□□ 0.54
TMEM50B-210ENST00000542230 TWNKQ96RR1 684 aa18.41■□□□□ 0.54
TMEM50B-210ENST00000542230 SNTG2Q9NY99 539 aa18.41■□□□□ 0.54
TMEM50B-210ENST00000542230 HAS3O00219 553 aa18.41■□□□□ 0.54
TMEM50B-210ENST00000542230 PGRMC1O00264 195 aaKnown RBP18.41■□□□□ 0.54
TMEM50B-210ENST00000542230 MTA2O94776 668 aa18.41■□□□□ 0.54
TMEM50B-210ENST00000542230 PGK1P00558 417 aa18.41■□□□□ 0.54
TMEM50B-210ENST00000542230 POLR2BP30876 1174 aaKnown RBP18.41■□□□□ 0.54
TMEM50B-210ENST00000542230 PSMC4P43686 418 aa18.41■□□□□ 0.54
TMEM50B-210ENST00000542230 NSFP46459 744 aaKnown RBP18.41■□□□□ 0.54
TMEM50B-210ENST00000542230 INHBEP58166 350 aa18.41■□□□□ 0.54
TMEM50B-210ENST00000542230 BPIFB4P59827 614 aa18.41■□□□□ 0.54
TMEM50B-210ENST00000542230 FSCN1Q16658 493 aaKnown RBP18.41■□□□□ 0.54
TMEM50B-210ENST00000542230 C11orf63Q6NUN7 778 aa18.41■□□□□ 0.54
TMEM50B-210ENST00000542230 CATSPER4Q7RTX7 472 aa18.41■□□□□ 0.54
TMEM50B-210ENST00000542230 RNPC3Q96LT9 517 aaKnown RBP18.41■□□□□ 0.54
TMEM50B-210ENST00000542230 ZMAT2Q96NC0 199 aaKnown RBP18.41■□□□□ 0.54
TMEM50B-210ENST00000542230 AP5M1Q9H0R1 490 aa18.41■□□□□ 0.54
TMEM50B-210ENST00000542230 STIM2Q9P246 746 aa18.41■□□□□ 0.54
TMEM50B-210ENST00000542230 ANAPC7Q9UJX3 599 aa18.41■□□□□ 0.54
TMEM50B-210ENST00000542230 O00370 1275 aa18.4■□□□□ 0.54
TMEM50B-210ENST00000542230 CES2O00748 559 aa18.4■□□□□ 0.54
TMEM50B-210ENST00000542230 PPEF2O14830 753 aa18.4■□□□□ 0.54
TMEM50B-210ENST00000542230 IL18RAPO95256 599 aa18.4■□□□□ 0.54
TMEM50B-210ENST00000542230 C6orf222P0C671 652 aaPredicted RBP18.4■□□□□ 0.54
TMEM50B-210ENST00000542230 PEX5P50542 639 aa18.4■□□□□ 0.54
TMEM50B-210ENST00000542230 ZNF410Q86VK4 478 aa18.4■□□□□ 0.54
TMEM50B-210ENST00000542230 ZNF677Q86XU0 584 aa18.4■□□□□ 0.54
TMEM50B-210ENST00000542230 ZDHHC14Q8IZN3 488 aa18.4■□□□□ 0.54
TMEM50B-210ENST00000542230 CD101Q93033 1021 aa18.4■□□□□ 0.54
TMEM50B-210ENST00000542230 ERVK-5Q9HDB9 667 aa18.4■□□□□ 0.54
TMEM50B-210ENST00000542230 KRIT1O00522 736 aa18.4■□□□□ 0.54
TMEM50B-210ENST00000542230 MAP2K7O14733 419 aa18.4■□□□□ 0.54
TMEM50B-210ENST00000542230 AOC2O75106 756 aa18.4■□□□□ 0.54
TMEM50B-210ENST00000542230 PTP4A2Q12974 167 aa18.4■□□□□ 0.54
TMEM50B-210ENST00000542230 GLRA4Q5JXX5 417 aa18.4■□□□□ 0.54
TMEM50B-210ENST00000542230 WDTC1Q8N5D0 677 aa18.4■□□□□ 0.54
TMEM50B-210ENST00000542230 ACAP3Q96P50 834 aa18.4■□□□□ 0.54
TMEM50B-210ENST00000542230 SELENOOQ9BVL4 669 aa18.4■□□□□ 0.54
TMEM50B-210ENST00000542230 TCRBV7S2A1N4TA0A589 114 aa18.39■□□□□ 0.53
TMEM50B-210ENST00000542230 CA12O43570 354 aa18.39■□□□□ 0.53
TMEM50B-210ENST00000542230 TM4SF4P48230 202 aa18.39■□□□□ 0.53
TMEM50B-210ENST00000542230 FLT3LGP49771 235 aa18.39■□□□□ 0.53
TMEM50B-210ENST00000542230 PURAQ00577 322 aaKnown RBP18.39■□□□□ 0.53
TMEM50B-210ENST00000542230 GUCY2DQ02846 1103 aa18.39■□□□□ 0.53
TMEM50B-210ENST00000542230 C1orf131Q8NDD1 294 aaKnown RBP18.39■□□□□ 0.53
TMEM50B-210ENST00000542230 APOL6Q9BWW8 343 aa18.39■□□□□ 0.53
TMEM50B-210ENST00000542230 NXF3Q9H4D5 531 aaKnown RBP18.39■□□□□ 0.53
TMEM50B-210ENST00000542230 ADAM22Q9P0K1 906 aa18.39■□□□□ 0.53
TMEM50B-210ENST00000542230 AGAP1Q9UPQ3 857 aa18.39■□□□□ 0.53
TMEM50B-210ENST00000542230 CITO14578 2027 aa18.39■□□□□ 0.53
TMEM50B-210ENST00000542230 SMIM35A0A1B0GVV1 85 aa18.39■□□□□ 0.53
TMEM50B-210ENST00000542230 ERLIN1O75477 346 aa18.39■□□□□ 0.53
TMEM50B-210ENST00000542230 HEXIM1O94992 359 aaKnown RBP18.39■□□□□ 0.53
TMEM50B-210ENST00000542230 PYGMP11217 842 aa18.39■□□□□ 0.53
TMEM50B-210ENST00000542230 DARSP14868 501 aaKnown RBP18.39■□□□□ 0.53
TMEM50B-210ENST00000542230 AKAP5P24588 427 aa18.39■□□□□ 0.53
TMEM50B-210ENST00000542230 CARSP49589 748 aaKnown RBP18.39■□□□□ 0.53
TMEM50B-210ENST00000542230 CPT1AP50416 773 aa18.39■□□□□ 0.53
TMEM50B-210ENST00000542230 CASP8Q14790 479 aa18.39■□□□□ 0.53
TMEM50B-210ENST00000542230 TMEM132DQ14C87 1099 aa18.39■□□□□ 0.53
TMEM50B-210ENST00000542230 CXCL17Q6UXB2 119 aa18.39■□□□□ 0.53
TMEM50B-210ENST00000542230 WHAMMQ8TF30 809 aa18.39■□□□□ 0.53
TMEM50B-210ENST00000542230 SOCS4Q8WXH5 440 aa18.39■□□□□ 0.53
TMEM50B-210ENST00000542230 CELF4Q9BZC1 486 aaKnown RBP18.39■□□□□ 0.53
TMEM50B-210ENST00000542230 GCOM2Q9BZD3 368 aaPredicted RBP18.39■□□□□ 0.53
TMEM50B-210ENST00000542230 EPB41L5Q9HCM4 733 aa18.39■□□□□ 0.53
TMEM50B-210ENST00000542230 TJP2Q9UDY2 1190 aa18.39■□□□□ 0.53
TMEM50B-210ENST00000542230 SART1O43290 800 aaKnown RBP18.38■□□□□ 0.53
TMEM50B-210ENST00000542230 SPOPO43791 374 aa18.38■□□□□ 0.53
TMEM50B-210ENST00000542230 SREBF2Q12772 1141 aa18.38■□□□□ 0.53
TMEM50B-210ENST00000542230 ZNF667Q5HYK9 610 aa18.38■□□□□ 0.53
TMEM50B-210ENST00000542230 CCDC102AQ96A19 550 aa18.38■□□□□ 0.53
TMEM50B-210ENST00000542230 C18orf25Q96B23 403 aaPredicted RBP18.38■□□□□ 0.53
TMEM50B-210ENST00000542230 RNF39Q9H2S5 420 aa18.38■□□□□ 0.53
TMEM50B-210ENST00000542230 UVRAGQ9P2Y5 699 aa18.38■□□□□ 0.53
TMEM50B-210ENST00000542230 AMACRQ9UHK6 382 aa18.38■□□□□ 0.53
TMEM50B-210ENST00000542230 SCN1AP35498 2009 aa18.38■□□□□ 0.53
TMEM50B-210ENST00000542230 MYCNP04198 464 aaPredicted RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms