RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 FTLP02792 175 aaPredicted RBP7.8□□□□□ -1.16
YBX3-210ENST00000540975 USP14P54578 494 aa7.8□□□□□ -1.16
YBX3-210ENST00000540975 FSTL1Q12841 308 aa7.8□□□□□ -1.16
YBX3-210ENST00000540975 PCSK4Q6UW60 755 aa7.8□□□□□ -1.16
YBX3-210ENST00000540975 Q6YL49 198 aa7.8□□□□□ -1.16
YBX3-210ENST00000540975 FAM90A1Q86YD7 464 aa7.8□□□□□ -1.16
YBX3-210ENST00000540975 PDSS2Q86YH6 399 aa7.8□□□□□ -1.16
YBX3-210ENST00000540975 TMIEQ8NEW7 156 aa7.8□□□□□ -1.16
YBX3-210ENST00000540975 MAP3K14Q99558 947 aa7.8□□□□□ -1.16
YBX3-210ENST00000540975 CDH19Q9H159 772 aa7.8□□□□□ -1.16
YBX3-210ENST00000540975 SLC12A5Q9H2X9 1139 aa7.8□□□□□ -1.16
YBX3-210ENST00000540975 BRD9Q9H8M2 597 aa7.8□□□□□ -1.16
YBX3-210ENST00000540975 KMT5AQ9NQR1 393 aa7.8□□□□□ -1.16
YBX3-210ENST00000540975 ZIM2Q9NZV7 527 aa7.8□□□□□ -1.16
YBX3-210ENST00000540975 ABCF2Q9UG63 623 aa7.8□□□□□ -1.16
YBX3-210ENST00000540975 PACSIN3Q9UKS6 424 aa7.8□□□□□ -1.16
YBX3-210ENST00000540975 DMRT1Q9Y5R6 373 aa7.8□□□□□ -1.16
YBX3-210ENST00000540975 OFD1O75665 1012 aa7.79□□□□□ -1.16
YBX3-210ENST00000540975 RFPL1O75677 317 aa7.79□□□□□ -1.16
YBX3-210ENST00000540975 ODR4Q5SWX8 454 aa7.79□□□□□ -1.16
YBX3-210ENST00000540975 IFIT1BQ5T764 474 aaKnown RBP7.79□□□□□ -1.16
YBX3-210ENST00000540975 TPH2Q8IWU9 490 aa7.79□□□□□ -1.16
YBX3-210ENST00000540975 RAVER1Q8IY67 606 aaKnown RBP7.79□□□□□ -1.16
YBX3-210ENST00000540975 GRAMD1CQ8IYS0 662 aa7.79□□□□□ -1.16
YBX3-210ENST00000540975 BEND2Q8NDZ0 799 aa7.79□□□□□ -1.16
YBX3-210ENST00000540975 C1orf43Q9BWL3 253 aa7.79□□□□□ -1.16
YBX3-210ENST00000540975 WDCPQ9H6R7 721 aa7.79□□□□□ -1.16
YBX3-210ENST00000540975 UNKLQ9H9P5 680 aaKnown RBP7.79□□□□□ -1.16
YBX3-210ENST00000540975 LMBRD1Q9NUN5 540 aa7.79□□□□□ -1.16
YBX3-210ENST00000540975 EPN1Q9Y6I3 576 aaPredicted RBP7.79□□□□□ -1.16
YBX3-210ENST00000540975 AP1G1O43747 822 aa7.78□□□□□ -1.16
YBX3-210ENST00000540975 GJB1P08034 283 aa7.78□□□□□ -1.16
YBX3-210ENST00000540975 ITGAMP11215 1152 aa7.78□□□□□ -1.16
YBX3-210ENST00000540975 VAV2P52735 878 aa7.78□□□□□ -1.16
YBX3-210ENST00000540975 ZNF844Q08AG5 666 aa7.78□□□□□ -1.16
YBX3-210ENST00000540975 CFAP52Q8N1V2 620 aa7.78□□□□□ -1.16
YBX3-210ENST00000540975 PDPRQ8NCN5 879 aa7.78□□□□□ -1.16
YBX3-210ENST00000540975 LINC00476Q8WZB0 136 aa7.78□□□□□ -1.16
YBX3-210ENST00000540975 C1GALT1C1Q96EU7 318 aa7.78□□□□□ -1.16
YBX3-210ENST00000540975 LRIG1Q96JA1 1093 aa7.78□□□□□ -1.16
YBX3-210ENST00000540975 COQ10AQ96MF6 247 aa7.78□□□□□ -1.16
YBX3-210ENST00000540975 MRPL46Q9H2W6 279 aaKnown RBP7.78□□□□□ -1.16
YBX3-210ENST00000540975 TOR3AQ9H497 397 aa7.78□□□□□ -1.16
YBX3-210ENST00000540975 CTTNBP2NLQ9P2B4 639 aa7.78□□□□□ -1.16
YBX3-210ENST00000540975 CDYLQ9Y232 598 aa7.78□□□□□ -1.16
YBX3-210ENST00000540975 ALDH2P05091 517 aa7.77□□□□□ -1.17
YBX3-210ENST00000540975 GNAI3P08754 354 aa7.77□□□□□ -1.17
YBX3-210ENST00000540975 HKR1P10072 659 aa7.77□□□□□ -1.17
YBX3-210ENST00000540975 TYRP14679 529 aa7.77□□□□□ -1.17
YBX3-210ENST00000540975 TGM1P22735 817 aa7.77□□□□□ -1.17
YBX3-210ENST00000540975 PROZP22891 400 aa7.77□□□□□ -1.17
YBX3-210ENST00000540975 PIK3CGP48736 1102 aa7.77□□□□□ -1.17
YBX3-210ENST00000540975 GNAI1P63096 354 aa7.77□□□□□ -1.17
YBX3-210ENST00000540975 BLOC1S1P78537 153 aa7.77□□□□□ -1.17
YBX3-210ENST00000540975 GTF2H3Q13889 308 aa7.77□□□□□ -1.17
YBX3-210ENST00000540975 ZNF267Q14586 743 aaPredicted RBP7.77□□□□□ -1.17
YBX3-210ENST00000540975 HECTD2Q5U5R9 776 aa7.77□□□□□ -1.17
YBX3-210ENST00000540975 COLGALT2Q8IYK4 626 aa7.77□□□□□ -1.17
YBX3-210ENST00000540975 ANKRD13AQ8IZ07 590 aa7.77□□□□□ -1.17
YBX3-210ENST00000540975 SH2D3CQ8N5H7 860 aa7.77□□□□□ -1.17
YBX3-210ENST00000540975 NSUN7Q8NE18 718 aaKnown RBP7.77□□□□□ -1.17
YBX3-210ENST00000540975 SCAMP4Q969E2 229 aa7.77□□□□□ -1.17
YBX3-210ENST00000540975 FAM167AQ96KS9 214 aa7.77□□□□□ -1.17
YBX3-210ENST00000540975 AIFM3Q96NN9 605 aa7.77□□□□□ -1.17
YBX3-210ENST00000540975 AGAP2Q99490 1192 aa7.77□□□□□ -1.17
YBX3-210ENST00000540975 PNPOQ9NVS9 261 aa7.77□□□□□ -1.17
YBX3-210ENST00000540975 RLIMQ9NVW2 624 aa7.77□□□□□ -1.17
YBX3-210ENST00000540975 CFAP97Q9P2B7 532 aa7.77□□□□□ -1.17
YBX3-210ENST00000540975 TESQ9UGI8 421 aaKnown RBP7.77□□□□□ -1.17
YBX3-210ENST00000540975 E9PLN8 166 aa7.76□□□□□ -1.17
YBX3-210ENST00000540975 RHOBTB3O94955 611 aa7.76□□□□□ -1.17
YBX3-210ENST00000540975 KCNA2P16389 499 aa7.76□□□□□ -1.17
YBX3-210ENST00000540975 PHKA1P46020 1223 aa7.76□□□□□ -1.17
YBX3-210ENST00000540975 AVPR1BP47901 424 aa7.76□□□□□ -1.17
YBX3-210ENST00000540975 PSMC1P62191 440 aaKnown RBP7.76□□□□□ -1.17
YBX3-210ENST00000540975 NKX6-1P78426 367 aaPredicted RBP7.76□□□□□ -1.17
YBX3-210ENST00000540975 PURAQ00577 322 aaKnown RBP7.76□□□□□ -1.17
YBX3-210ENST00000540975 GEN1Q17RS7 908 aa7.76□□□□□ -1.17
YBX3-210ENST00000540975 CCDC157Q569K6 752 aa7.76□□□□□ -1.17
YBX3-210ENST00000540975 SP5Q6BEB4 398 aaPredicted RBP7.76□□□□□ -1.17
YBX3-210ENST00000540975 SUPT20HQ8NEM7 779 aa7.76□□□□□ -1.17
YBX3-210ENST00000540975 GPR150Q8NGU9 434 aa7.76□□□□□ -1.17
YBX3-210ENST00000540975 SLC35G2Q8TBE7 412 aa7.76□□□□□ -1.17
YBX3-210ENST00000540975 TNPO1Q92973 898 aaKnown RBP7.76□□□□□ -1.17
YBX3-210ENST00000540975 PTCD3Q96EY7 689 aaKnown RBP7.76□□□□□ -1.17
YBX3-210ENST00000540975 Q96MF0 132 aa7.76□□□□□ -1.17
YBX3-210ENST00000540975 CGRRF1Q99675 332 aa7.76□□□□□ -1.17
YBX3-210ENST00000540975 VKORC1Q9BQB6 163 aa7.76□□□□□ -1.17
YBX3-210ENST00000540975 SLAMF7Q9NQ25 335 aa7.76□□□□□ -1.17
YBX3-210ENST00000540975 TBCCD1Q9NVR7 557 aa7.76□□□□□ -1.17
YBX3-210ENST00000540975 PCDHA1Q9Y5I3 950 aa7.76□□□□□ -1.17
YBX3-210ENST00000540975 NR2E3Q9Y5X4 410 aa7.76□□□□□ -1.17
YBX3-210ENST00000540975 PRAMEF33A0A0G2JMD5 474 aa7.75□□□□□ -1.17
YBX3-210ENST00000540975 A0A1W2PS29 197 aa7.75□□□□□ -1.17
YBX3-210ENST00000540975 H3BUI4 141 aa7.75□□□□□ -1.17
YBX3-210ENST00000540975 PRAMEF10O60809 474 aa7.75□□□□□ -1.17
YBX3-210ENST00000540975 MATN4O95460 622 aa7.75□□□□□ -1.17
YBX3-210ENST00000540975 S100BP04271 92 aaPredicted RBP7.75□□□□□ -1.17
YBX3-210ENST00000540975 HSPA6P17066 643 aa7.75□□□□□ -1.17
YBX3-210ENST00000540975 SEC24CP53992 1094 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms