RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 PARM1Q6UWI2 310 aa18.2■□□□□ 0.5
DDB1-215ENST00000539712 GLIS3Q8NEA6 775 aa18.2■□□□□ 0.5
DDB1-215ENST00000539712 FGF14Q92915 247 aa18.2■□□□□ 0.5
DDB1-215ENST00000539712 PANK4Q9NVE7 773 aa18.2■□□□□ 0.5
DDB1-215ENST00000539712 C2CD2Q9Y426 696 aa18.2■□□□□ 0.5
DDB1-215ENST00000539712 ZFP37Q9Y6Q3 630 aaPredicted RBP18.2■□□□□ 0.5
DDB1-215ENST00000539712 NUMBLQ9Y6R0 609 aa18.2■□□□□ 0.5
DDB1-215ENST00000539712 CUTAO60888 179 aa18.19■□□□□ 0.5
DDB1-215ENST00000539712 IDEP14735 1019 aa18.19■□□□□ 0.5
DDB1-215ENST00000539712 HOXD13P35453 343 aa18.19■□□□□ 0.5
DDB1-215ENST00000539712 SCN1AP35498 2009 aa18.19■□□□□ 0.5
DDB1-215ENST00000539712 TMEM132DQ14C87 1099 aa18.19■□□□□ 0.5
DDB1-215ENST00000539712 FOXD4L6Q3SYB3 417 aaPredicted RBP18.19■□□□□ 0.5
DDB1-215ENST00000539712 PABPC1LQ4VXU2 614 aaKnown RBP18.19■□□□□ 0.5
DDB1-215ENST00000539712 CWF19L1Q69YN2 538 aaKnown RBP18.19■□□□□ 0.5
DDB1-215ENST00000539712 FOXD4L3Q6VB84 417 aaPredicted RBP18.19■□□□□ 0.5
DDB1-215ENST00000539712 RNF19BQ6ZMZ0 732 aa18.19■□□□□ 0.5
DDB1-215ENST00000539712 NPAS3Q8IXF0 933 aa18.19■□□□□ 0.5
DDB1-215ENST00000539712 EFCAB13Q8IY85 973 aa18.19■□□□□ 0.5
DDB1-215ENST00000539712 POMGNT1Q8WZA1 660 aa18.19■□□□□ 0.5
DDB1-215ENST00000539712 HPS3Q969F9 1004 aa18.19■□□□□ 0.5
DDB1-215ENST00000539712 ACCSQ96QU6 501 aa18.19■□□□□ 0.5
DDB1-215ENST00000539712 CYP4F11Q9HBI6 524 aa18.19■□□□□ 0.5
DDB1-215ENST00000539712 AVENQ9NQS1 362 aaPredicted RBP18.19■□□□□ 0.5
DDB1-215ENST00000539712 AFF4Q9UHB7 1163 aaKnown RBP18.19■□□□□ 0.5
DDB1-215ENST00000539712 KCNH3Q9ULD8 1083 aa18.19■□□□□ 0.5
DDB1-215ENST00000539712 KRBA1A5PL33 1030 aa18.18■□□□□ 0.5
DDB1-215ENST00000539712 PRRG1O14668 218 aa18.18■□□□□ 0.5
DDB1-215ENST00000539712 XPOTO43592 962 aaKnown RBP18.18■□□□□ 0.5
DDB1-215ENST00000539712 PI15O43692 258 aa18.18■□□□□ 0.5
DDB1-215ENST00000539712 GCNT3O95395 438 aa18.18■□□□□ 0.5
DDB1-215ENST00000539712 RHOP08100 348 aa18.18■□□□□ 0.5
DDB1-215ENST00000539712 TYMPP19971 482 aa18.18■□□□□ 0.5
DDB1-215ENST00000539712 CLCN5P51795 746 aa18.18■□□□□ 0.5
DDB1-215ENST00000539712 YWHAHQ04917 246 aaPredicted RBP18.18■□□□□ 0.5
DDB1-215ENST00000539712 ADCY1Q08828 1119 aa18.18■□□□□ 0.5
DDB1-215ENST00000539712 POSTNQ15063 836 aa18.18■□□□□ 0.5
DDB1-215ENST00000539712 SCARA3Q6AZY7 606 aa18.18■□□□□ 0.5
DDB1-215ENST00000539712 ASTLQ6HA08 431 aaPredicted RBP18.18■□□□□ 0.5
DDB1-215ENST00000539712 CNNM4Q6P4Q7 775 aa18.18■□□□□ 0.5
DDB1-215ENST00000539712 SPRYD3Q8NCJ5 442 aa18.18■□□□□ 0.5
DDB1-215ENST00000539712 BORCS6Q96GS4 357 aa18.18■□□□□ 0.5
DDB1-215ENST00000539712 SENP8Q96LD8 212 aa18.18■□□□□ 0.5
DDB1-215ENST00000539712 TRIM9Q9C026 710 aa18.18■□□□□ 0.5
DDB1-215ENST00000539712 TNMDQ9H2S6 317 aa18.18■□□□□ 0.5
DDB1-215ENST00000539712 CRISPLD1Q9H336 500 aa18.18■□□□□ 0.5
DDB1-215ENST00000539712 WNT16Q9UBV4 365 aa18.18■□□□□ 0.5
DDB1-215ENST00000539712 PCDHB13Q9Y5F0 798 aa18.18■□□□□ 0.5
DDB1-215ENST00000539712 INSL5Q9Y5Q6 135 aa18.18■□□□□ 0.5
DDB1-215ENST00000539712 PRPF6O94906 941 aaKnown RBP18.17■□□□□ 0.5
DDB1-215ENST00000539712 CFHP08603 1231 aa18.17■□□□□ 0.5
DDB1-215ENST00000539712 OR4Q2P0C623 313 aa18.17■□□□□ 0.5
DDB1-215ENST00000539712 SRFP11831 508 aa18.17■□□□□ 0.5
DDB1-215ENST00000539712 PDIA4P13667 645 aaKnown RBP18.17■□□□□ 0.5
DDB1-215ENST00000539712 ELF1P32519 619 aa18.17■□□□□ 0.5
DDB1-215ENST00000539712 CCR2P41597 374 aa18.17■□□□□ 0.5
DDB1-215ENST00000539712 PRSS36Q5K4E3 855 aa18.17■□□□□ 0.5
DDB1-215ENST00000539712 DSTYKQ6XUX3 929 aa18.17■□□□□ 0.5
DDB1-215ENST00000539712 SIX5Q8N196 739 aa18.17■□□□□ 0.5
DDB1-215ENST00000539712 PHOX2BQ99453 314 aa18.17■□□□□ 0.5
DDB1-215ENST00000539712 CBWD1Q9BRT8 395 aa18.17■□□□□ 0.5
DDB1-215ENST00000539712 FAM213AQ9BRX8 229 aa18.17■□□□□ 0.5
DDB1-215ENST00000539712 DPP3Q9NY33 737 aa18.17■□□□□ 0.5
DDB1-215ENST00000539712 CEP72Q9P209 647 aa18.17■□□□□ 0.5
DDB1-215ENST00000539712 MAFFQ9ULX9 164 aa18.17■□□□□ 0.5
DDB1-215ENST00000539712 PCDHA7Q9UN72 937 aa18.17■□□□□ 0.5
DDB1-215ENST00000539712 EXOC7Q9UPT5 735 aa18.17■□□□□ 0.5
DDB1-215ENST00000539712 ZFHX2Q9C0A1 2572 aaPredicted RBP18.16■□□□□ 0.5
DDB1-215ENST00000539712 CYP11A1P05108 521 aa18.16■□□□□ 0.5
DDB1-215ENST00000539712 PTPN2P17706 415 aa18.16■□□□□ 0.5
DDB1-215ENST00000539712 GARTP22102 1010 aa18.16■□□□□ 0.5
DDB1-215ENST00000539712 GPR17Q13304 367 aa18.16■□□□□ 0.5
DDB1-215ENST00000539712 ALCAMQ13740 583 aa18.16■□□□□ 0.5
DDB1-215ENST00000539712 EPM2AIP1Q7L775 607 aaPredicted RBP18.16■□□□□ 0.5
DDB1-215ENST00000539712 CXorf38Q8TB03 319 aa18.16■□□□□ 0.5
DDB1-215ENST00000539712 GPR152Q8TDT2 470 aa18.16■□□□□ 0.5
DDB1-215ENST00000539712 ING5Q8WYH8 240 aa18.16■□□□□ 0.5
DDB1-215ENST00000539712 DHX58Q96C10 678 aa18.16■□□□□ 0.5
DDB1-215ENST00000539712 TCEAL4Q96EI5 215 aa18.16■□□□□ 0.5
DDB1-215ENST00000539712 SAAL1Q96ER3 474 aa18.16■□□□□ 0.5
DDB1-215ENST00000539712 FAM84AQ96KN4 292 aa18.16■□□□□ 0.5
DDB1-215ENST00000539712 TMEM209Q96SK2 561 aa18.16■□□□□ 0.5
DDB1-215ENST00000539712 PRRX2Q99811 253 aa18.16■□□□□ 0.5
DDB1-215ENST00000539712 RTP3Q9BQQ7 232 aa18.16■□□□□ 0.5
DDB1-215ENST00000539712 OXCT2Q9BYC2 517 aaPredicted RBP18.16■□□□□ 0.5
DDB1-215ENST00000539712 CUEDC2Q9H467 287 aa18.16■□□□□ 0.5
DDB1-215ENST00000539712 SLC2A4RGQ9NR83 387 aa18.16■□□□□ 0.5
DDB1-215ENST00000539712 RCOR1Q9UKL0 485 aa18.16■□□□□ 0.5
DDB1-215ENST00000539712 ZDHHC9Q9Y397 364 aa18.16■□□□□ 0.5
DDB1-215ENST00000539712 MRPS23Q9Y3D9 190 aaKnown RBP18.16■□□□□ 0.5
DDB1-215ENST00000539712 OR6C75A6NL08 312 aa18.15■□□□□ 0.5
DDB1-215ENST00000539712 MOSPD3O75425 235 aa18.15■□□□□ 0.5
DDB1-215ENST00000539712 LRG1P02750 347 aa18.15■□□□□ 0.5
DDB1-215ENST00000539712 HSP90AA1P07900 732 aaKnown RBP18.15■□□□□ 0.5
DDB1-215ENST00000539712 CEBPBP17676 345 aa18.15■□□□□ 0.5
DDB1-215ENST00000539712 PAX3P23760 479 aa18.15■□□□□ 0.5
DDB1-215ENST00000539712 NUBP1P53384 320 aa18.15■□□□□ 0.5
DDB1-215ENST00000539712 PTPN5P54829 565 aa18.15■□□□□ 0.5
DDB1-215ENST00000539712 GPC5P78333 572 aa18.15■□□□□ 0.5
DDB1-215ENST00000539712 DNM1Q05193 864 aaKnown RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms