RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 KLHDC4Q8TBB5 520 aa5□□□□□ -1.61
CHD1-203ENST00000505657 NUP133Q8WUM0 1156 aa5□□□□□ -1.61
CHD1-203ENST00000505657 LENG9Q96B70 501 aa5□□□□□ -1.61
CHD1-203ENST00000505657 MYEOVQ96EZ4 313 aa5□□□□□ -1.61
CHD1-203ENST00000505657 SLC35A4Q96G79 324 aa5□□□□□ -1.61
CHD1-203ENST00000505657 NT5C1BQ96P26 610 aa5□□□□□ -1.61
CHD1-203ENST00000505657 MRPL46Q9H2W6 279 aaKnown RBP5□□□□□ -1.61
CHD1-203ENST00000505657 RNPEPQ9H4A4 650 aa5□□□□□ -1.61
CHD1-203ENST00000505657 METTL14Q9HCE5 456 aaKnown RBP5□□□□□ -1.61
CHD1-203ENST00000505657 MAN1C1Q9NR34 630 aa5□□□□□ -1.61
CHD1-203ENST00000505657 PNPOQ9NVS9 261 aa5□□□□□ -1.61
CHD1-203ENST00000505657 ANKFY1Q9P2R3 1169 aa5□□□□□ -1.61
CHD1-203ENST00000505657 AGAP1Q9UPQ3 857 aa5□□□□□ -1.61
CHD1-203ENST00000505657 CDYLQ9Y232 598 aa5□□□□□ -1.61
CHD1-203ENST00000505657 GAGE12BA1L429 117 aa4.99□□□□□ -1.61
CHD1-203ENST00000505657 GAGE12HA6NDE8 117 aa4.99□□□□□ -1.61
CHD1-203ENST00000505657 TMEM200CA6NKL6 621 aa4.99□□□□□ -1.61
CHD1-203ENST00000505657 H3BML4 177 aa4.99□□□□□ -1.61
CHD1-203ENST00000505657 H3BUI4 141 aa4.99□□□□□ -1.61
CHD1-203ENST00000505657 ARIH2O95376 493 aa4.99□□□□□ -1.61
CHD1-203ENST00000505657 GJB1P08034 283 aa4.99□□□□□ -1.61
CHD1-203ENST00000505657 LAG3P18627 525 aa4.99□□□□□ -1.61
CHD1-203ENST00000505657 RAB1AP62820 205 aa4.99□□□□□ -1.61
CHD1-203ENST00000505657 RESTQ13127 1097 aa4.99□□□□□ -1.61
CHD1-203ENST00000505657 TP53BP2Q13625 1128 aa4.99□□□□□ -1.61
CHD1-203ENST00000505657 TIGD2Q4W5G0 525 aa4.99□□□□□ -1.61
CHD1-203ENST00000505657 CCDC157Q569K6 752 aa4.99□□□□□ -1.61
CHD1-203ENST00000505657 Q6ZPA2 131 aa4.99□□□□□ -1.61
CHD1-203ENST00000505657 ZNF627Q7L945 461 aa4.99□□□□□ -1.61
CHD1-203ENST00000505657 WDR75Q8IWA0 830 aaKnown RBP4.99□□□□□ -1.61
CHD1-203ENST00000505657 TMEM132CQ8N3T6 1108 aa4.99□□□□□ -1.61
CHD1-203ENST00000505657 Q8NA96 180 aa4.99□□□□□ -1.61
CHD1-203ENST00000505657 PDPRQ8NCN5 879 aa4.99□□□□□ -1.61
CHD1-203ENST00000505657 SLC17A8Q8NDX2 589 aa4.99□□□□□ -1.61
CHD1-203ENST00000505657 NSUN7Q8NE18 718 aaKnown RBP4.99□□□□□ -1.61
CHD1-203ENST00000505657 LARP4BQ92615 738 aaKnown RBP4.99□□□□□ -1.61
CHD1-203ENST00000505657 HAS1Q92839 578 aa4.99□□□□□ -1.61
CHD1-203ENST00000505657 TNPO1Q92973 898 aaKnown RBP4.99□□□□□ -1.61
CHD1-203ENST00000505657 NACC2Q96BF6 587 aa4.99□□□□□ -1.61
CHD1-203ENST00000505657 LRIG1Q96JA1 1093 aa4.99□□□□□ -1.61
CHD1-203ENST00000505657 IMPG2Q9BZV3 1241 aa4.99□□□□□ -1.61
CHD1-203ENST00000505657 REXO4Q9GZR2 422 aaKnown RBP4.99□□□□□ -1.61
CHD1-203ENST00000505657 WDCPQ9H6R7 721 aa4.99□□□□□ -1.61
CHD1-203ENST00000505657 SIDT1Q9NXL6 827 aaKnown RBP4.99□□□□□ -1.61
CHD1-203ENST00000505657 ZNF785A8K8V0 405 aa4.98□□□□□ -1.61
CHD1-203ENST00000505657 CTNND1O60716 968 aaKnown RBP4.98□□□□□ -1.61
CHD1-203ENST00000505657 TUSC2O75896 110 aa4.98□□□□□ -1.61
CHD1-203ENST00000505657 SPDEFO95238 335 aa4.98□□□□□ -1.61
CHD1-203ENST00000505657 GPANK1O95872 356 aa4.98□□□□□ -1.61
CHD1-203ENST00000505657 FTH1P19P0C7X4 201 aa4.98□□□□□ -1.61
CHD1-203ENST00000505657 HDCP19113 662 aa4.98□□□□□ -1.61
CHD1-203ENST00000505657 DDX6P26196 483 aaKnown RBP eCLIP4.98□□□□□ -1.61
CHD1-203ENST00000505657 PTGS2P35354 604 aa4.98□□□□□ -1.61
CHD1-203ENST00000505657 CXADRP78310 365 aa4.98□□□□□ -1.61
CHD1-203ENST00000505657 EXOSC9Q06265 439 aaKnown RBP4.98□□□□□ -1.61
CHD1-203ENST00000505657 SCAPQ12770 1279 aa4.98□□□□□ -1.61
CHD1-203ENST00000505657 KIF22Q14807 665 aa4.98□□□□□ -1.61
CHD1-203ENST00000505657 GEN1Q17RS7 908 aa4.98□□□□□ -1.61
CHD1-203ENST00000505657 MINDY4Q4G0A6 757 aa4.98□□□□□ -1.61
CHD1-203ENST00000505657 SWSAP1Q6NVH7 229 aa4.98□□□□□ -1.61
CHD1-203ENST00000505657 KCNV1Q6PIU1 500 aa4.98□□□□□ -1.61
CHD1-203ENST00000505657 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.98□□□□□ -1.61
CHD1-203ENST00000505657 TTC8Q8TAM2 541 aa4.98□□□□□ -1.61
CHD1-203ENST00000505657 PROKR1Q8TCW9 393 aa4.98□□□□□ -1.61
CHD1-203ENST00000505657 ASB10Q8WXI3 467 aa4.98□□□□□ -1.61
CHD1-203ENST00000505657 RNF31Q96EP0 1072 aa4.98□□□□□ -1.61
CHD1-203ENST00000505657 CDK5RAP3Q96JB5 506 aa4.98□□□□□ -1.61
CHD1-203ENST00000505657 PNKPQ96T60 521 aa4.98□□□□□ -1.61
CHD1-203ENST00000505657 B3GNT5Q9BYG0 378 aa4.98□□□□□ -1.61
CHD1-203ENST00000505657 BRD9Q9H8M2 597 aa4.98□□□□□ -1.61
CHD1-203ENST00000505657 CTTNBP2NLQ9P2B4 639 aa4.98□□□□□ -1.61
CHD1-203ENST00000505657 PCDHA6Q9UN73 950 aa4.98□□□□□ -1.61
CHD1-203ENST00000505657 VSTM5A8MXK1 200 aa4.97□□□□□ -1.61
CHD1-203ENST00000505657 ABHD16AO95870 558 aa4.97□□□□□ -1.61
CHD1-203ENST00000505657 GNAI3P08754 354 aa4.97□□□□□ -1.61
CHD1-203ENST00000505657 BMPR1AP36894 532 aa4.97□□□□□ -1.61
CHD1-203ENST00000505657 ZNF135P52742 658 aaPredicted RBP4.97□□□□□ -1.61
CHD1-203ENST00000505657 GNAI1P63096 354 aa4.97□□□□□ -1.61
CHD1-203ENST00000505657 MC2RQ01718 297 aa4.97□□□□□ -1.61
CHD1-203ENST00000505657 GALEQ14376 348 aa4.97□□□□□ -1.61
CHD1-203ENST00000505657 GRM3Q14832 879 aa4.97□□□□□ -1.61
CHD1-203ENST00000505657 CYP2A13Q16696 494 aa4.97□□□□□ -1.61
CHD1-203ENST00000505657 NPNTQ6UXI9 565 aa4.97□□□□□ -1.61
CHD1-203ENST00000505657 CFAP52Q8N1V2 620 aa4.97□□□□□ -1.61
CHD1-203ENST00000505657 SYNE4Q8N205 404 aa4.97□□□□□ -1.61
CHD1-203ENST00000505657 NEU4Q8WWR8 484 aaPredicted RBP4.97□□□□□ -1.61
CHD1-203ENST00000505657 FAM167AQ96KS9 214 aa4.97□□□□□ -1.61
CHD1-203ENST00000505657 ALOXE3Q9BYJ1 711 aa4.97□□□□□ -1.61
CHD1-203ENST00000505657 CHPF2Q9P2E5 772 aa4.97□□□□□ -1.61
CHD1-203ENST00000505657 KCNE5Q9UJ90 142 aa4.97□□□□□ -1.61
CHD1-203ENST00000505657 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.97□□□□□ -1.61
CHD1-203ENST00000505657 A0A088AWK7 358 aa4.96□□□□□ -1.62
CHD1-203ENST00000505657 ERN1O75460 977 aaKnown RBP4.96□□□□□ -1.62
CHD1-203ENST00000505657 CDKL5O76039 1030 aa4.96□□□□□ -1.62
CHD1-203ENST00000505657 RARBP10826 455 aa4.96□□□□□ -1.62
CHD1-203ENST00000505657 KRT4P19013 534 aa4.96□□□□□ -1.62
CHD1-203ENST00000505657 MAKP20794 623 aa4.96□□□□□ -1.62
CHD1-203ENST00000505657 IL12RB1P42701 662 aa4.96□□□□□ -1.62
CHD1-203ENST00000505657 AGFG1P52594 562 aaKnown RBP4.96□□□□□ -1.62
CHD1-203ENST00000505657 SOX8P57073 446 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms