RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 TGS1Q96RS0 853 aaKnown RBP20.84■□□□□ 0.93
CCM2-216ENST00000488727 FNBP1Q96RU3 617 aa20.84■□□□□ 0.93
CCM2-216ENST00000488727 TMEM175Q9BSA9 504 aa20.84■□□□□ 0.93
CCM2-216ENST00000488727 LUC7L2Q9Y383 392 aaKnown RBP20.84■□□□□ 0.93
CCM2-216ENST00000488727 PLXNA4Q9HCM2 1894 aa20.84■□□□□ 0.93
CCM2-216ENST00000488727 NRP1O14786 923 aa20.84■□□□□ 0.93
CCM2-216ENST00000488727 URI1O94763 535 aaPredicted RBP20.84■□□□□ 0.93
CCM2-216ENST00000488727 IGFBP6P24592 240 aaPredicted RBP20.84■□□□□ 0.93
CCM2-216ENST00000488727 BMPR1AP36894 532 aa20.84■□□□□ 0.93
CCM2-216ENST00000488727 MTIF2P46199 727 aaKnown RBP20.84■□□□□ 0.93
CCM2-216ENST00000488727 OR1G1P47890 313 aa20.84■□□□□ 0.93
CCM2-216ENST00000488727 CLCNKBP51801 687 aa20.84■□□□□ 0.93
CCM2-216ENST00000488727 MCCD1P59942 119 aaPredicted RBP20.84■□□□□ 0.93
CCM2-216ENST00000488727 ERVK-21P61565 698 aa20.84■□□□□ 0.93
CCM2-216ENST00000488727 CLDN10P78369 228 aa20.84■□□□□ 0.93
CCM2-216ENST00000488727 TFAMQ00059 246 aaKnown RBP20.84■□□□□ 0.93
CCM2-216ENST00000488727 BFSP1Q12934 665 aa20.84■□□□□ 0.93
CCM2-216ENST00000488727 SCARA3Q6AZY7 606 aa20.84■□□□□ 0.93
CCM2-216ENST00000488727 NT5DC4Q86YG4 428 aa20.84■□□□□ 0.93
CCM2-216ENST00000488727 WDR49Q8IV35 697 aa20.84■□□□□ 0.93
CCM2-216ENST00000488727 ZNF397Q8NF99 534 aaPredicted RBP20.84■□□□□ 0.93
CCM2-216ENST00000488727 TMC2Q8TDI7 906 aa20.84■□□□□ 0.93
CCM2-216ENST00000488727 BCL7CQ8WUZ0 217 aaPredicted RBP20.84■□□□□ 0.93
CCM2-216ENST00000488727 ZNF516Q92618 1163 aa20.84■□□□□ 0.93
CCM2-216ENST00000488727 ZNF558Q96NG5 402 aa20.84■□□□□ 0.93
CCM2-216ENST00000488727 CGRRF1Q99675 332 aa20.84■□□□□ 0.93
CCM2-216ENST00000488727 MTMR12Q9C0I1 747 aa20.84■□□□□ 0.93
CCM2-216ENST00000488727 CERS4Q9HA82 394 aa20.84■□□□□ 0.93
CCM2-216ENST00000488727 A0A1W2PQJ5 194 aa20.83■□□□□ 0.92
CCM2-216ENST00000488727 TNNI1P19237 187 aa20.83■□□□□ 0.92
CCM2-216ENST00000488727 CYP3A5P20815 502 aa20.83■□□□□ 0.92
CCM2-216ENST00000488727 CTNNB1P35222 781 aa20.83■□□□□ 0.92
CCM2-216ENST00000488727 ALDH7A1P49419 539 aaKnown RBP20.83■□□□□ 0.92
CCM2-216ENST00000488727 VAMP7P51809 220 aa20.83■□□□□ 0.92
CCM2-216ENST00000488727 MEA1Q16626 185 aa20.83■□□□□ 0.92
CCM2-216ENST00000488727 EPC2Q52LR7 807 aa20.83■□□□□ 0.92
CCM2-216ENST00000488727 MARCH5Q9NX47 278 aa20.83■□□□□ 0.92
CCM2-216ENST00000488727 PRG3Q9Y2Y8 225 aaPredicted RBP20.83■□□□□ 0.92
CCM2-216ENST00000488727 SZT2Q5T011 3432 aa20.83■□□□□ 0.92
CCM2-216ENST00000488727 ALDH2P05091 517 aa20.82■□□□□ 0.92
CCM2-216ENST00000488727 TRIM49P0CI25 452 aa20.82■□□□□ 0.92
CCM2-216ENST00000488727 TRIM49CP0CI26 452 aa20.82■□□□□ 0.92
CCM2-216ENST00000488727 ELF2Q15723 593 aa20.82■□□□□ 0.92
CCM2-216ENST00000488727 UPP1Q16831 310 aa20.82■□□□□ 0.92
CCM2-216ENST00000488727 C3orf58Q8NDZ4 430 aa20.82■□□□□ 0.92
CCM2-216ENST00000488727 BEST2Q8NFU1 509 aa20.82■□□□□ 0.92
CCM2-216ENST00000488727 DPP3Q9NY33 737 aa20.82■□□□□ 0.92
CCM2-216ENST00000488727 ARMCX3Q9UH62 379 aaPredicted RBP20.82■□□□□ 0.92
CCM2-216ENST00000488727 RWDD3Q9Y3V2 267 aa20.82■□□□□ 0.92
CCM2-216ENST00000488727 MRFAP1Q9Y605 127 aa20.82■□□□□ 0.92
CCM2-216ENST00000488727 SCN1AP35498 2009 aa20.82■□□□□ 0.92
CCM2-216ENST00000488727 C5orf67F2Z3F1 127 aa20.81■□□□□ 0.92
CCM2-216ENST00000488727 PPEF2O14830 753 aa20.81■□□□□ 0.92
CCM2-216ENST00000488727 XPOTO43592 962 aaKnown RBP20.81■□□□□ 0.92
CCM2-216ENST00000488727 KIF5CO60282 957 aa20.81■□□□□ 0.92
CCM2-216ENST00000488727 ITGB1P05556 798 aa20.81■□□□□ 0.92
CCM2-216ENST00000488727 TMEM191BP0C7N4 346 aa20.81■□□□□ 0.92
CCM2-216ENST00000488727 KRT13P13646 458 aa20.81■□□□□ 0.92
CCM2-216ENST00000488727 LRPAP1P30533 357 aa20.81■□□□□ 0.92
CCM2-216ENST00000488727 CCDC40Q4G0X9 1142 aa20.81■□□□□ 0.92
CCM2-216ENST00000488727 FKBP15Q5T1M5 1219 aa20.81■□□□□ 0.92
CCM2-216ENST00000488727 SLC39A11Q8N1S5 342 aa20.81■□□□□ 0.92
CCM2-216ENST00000488727 C1orf127Q8N9H9 656 aa20.81■□□□□ 0.92
CCM2-216ENST00000488727 CXorf38Q8TB03 319 aa20.81■□□□□ 0.92
CCM2-216ENST00000488727 UROC1Q96N76 676 aa20.81■□□□□ 0.92
CCM2-216ENST00000488727 TTYH1Q9H313 450 aaPredicted RBP20.81■□□□□ 0.92
CCM2-216ENST00000488727 ZNF576Q9H609 170 aa20.81■□□□□ 0.92
CCM2-216ENST00000488727 AAASQ9NRG9 546 aa20.81■□□□□ 0.92
CCM2-216ENST00000488727 MYO1AQ9UBC5 1043 aa20.81■□□□□ 0.92
CCM2-216ENST00000488727 FAN1Q9Y2M0 1017 aa20.81■□□□□ 0.92
CCM2-216ENST00000488727 PCDHB12Q9Y5F1 795 aa20.81■□□□□ 0.92
CCM2-216ENST00000488727 COL4A4P53420 1690 aaPredicted RBP20.81■□□□□ 0.92
CCM2-216ENST00000488727 EPOPA6NHQ4 379 aa20.81■□□□□ 0.92
CCM2-216ENST00000488727 PODXLO00592 558 aa20.81■□□□□ 0.92
CCM2-216ENST00000488727 TADA3O75528 432 aa20.81■□□□□ 0.92
CCM2-216ENST00000488727 KIF4AO95239 1232 aa20.81■□□□□ 0.92
CCM2-216ENST00000488727 MARSP56192 900 aaKnown RBP20.81■□□□□ 0.92
CCM2-216ENST00000488727 MAN2A1Q16706 1144 aa20.81■□□□□ 0.92
CCM2-216ENST00000488727 CD300LGQ6UXG3 332 aa20.81■□□□□ 0.92
CCM2-216ENST00000488727 FRMD5Q7Z6J6 570 aa20.81■□□□□ 0.92
CCM2-216ENST00000488727 KLHL23Q8NBE8 558 aa20.81■□□□□ 0.92
CCM2-216ENST00000488727 ACRBPQ8NEB7 543 aa20.81■□□□□ 0.92
CCM2-216ENST00000488727 HASPINQ8TF76 798 aa20.81■□□□□ 0.92
CCM2-216ENST00000488727 SAMD11Q96NU1 681 aa20.81■□□□□ 0.92
CCM2-216ENST00000488727 EFCAB8A8MWE9 144 aa20.8■□□□□ 0.92
CCM2-216ENST00000488727 PES1O00541 588 aaKnown RBP20.8■□□□□ 0.92
CCM2-216ENST00000488727 ZBED6P86452 979 aa20.8■□□□□ 0.92
CCM2-216ENST00000488727 ENPEPQ07075 957 aa20.8■□□□□ 0.92
CCM2-216ENST00000488727 PPP3CAQ08209 521 aa20.8■□□□□ 0.92
CCM2-216ENST00000488727 DUOXA2Q1HG44 320 aa20.8■□□□□ 0.92
CCM2-216ENST00000488727 TSR1Q2NL82 804 aaKnown RBP20.8■□□□□ 0.92
CCM2-216ENST00000488727 LRRN4CLQ8ND94 238 aa20.8■□□□□ 0.92
CCM2-216ENST00000488727 ARNTL2Q8WYA1 636 aa20.8■□□□□ 0.92
CCM2-216ENST00000488727 SLC35C1Q96A29 364 aa20.8■□□□□ 0.92
CCM2-216ENST00000488727 DDX27Q96GQ7 796 aaKnown RBP20.8■□□□□ 0.92
CCM2-216ENST00000488727 IGSF21Q96ID5 467 aa20.8■□□□□ 0.92
CCM2-216ENST00000488727 ANKRD36BP1Q96IX9 119 aa20.8■□□□□ 0.92
CCM2-216ENST00000488727 PLVAPQ9BX97 442 aa20.8■□□□□ 0.92
CCM2-216ENST00000488727 METTL14Q9HCE5 456 aaKnown RBP20.8■□□□□ 0.92
CCM2-216ENST00000488727 LZTFL1Q9NQ48 299 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms