RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 ALDH7A1P49419 539 aaKnown RBP4.31□□□□□ -1.72
CNOT4-202ENST00000356162 AFF1P51825 1210 aaKnown RBP4.31□□□□□ -1.72
CNOT4-202ENST00000356162 OSTNP61366 133 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 KRT17Q04695 432 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 KCNA1Q09470 495 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 ELAVL2Q12926 359 aaKnown RBP4.31□□□□□ -1.72
CNOT4-202ENST00000356162 STK4Q13043 487 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 MYBPC2Q14324 1141 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 SMC1AQ14683 1233 aaKnown RBP4.31□□□□□ -1.72
CNOT4-202ENST00000356162 BMS1Q14692 1282 aaKnown RBP4.31□□□□□ -1.72
CNOT4-202ENST00000356162 SURF1Q15526 300 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 KNOP1Q1ED39 458 aaKnown RBP4.31□□□□□ -1.72
CNOT4-202ENST00000356162 SLC10A6Q3KNW5 377 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 ZBTB41Q5SVQ8 909 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 NELFCDQ8IXH7 590 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 GPR65Q8IYL9 337 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 RNF168Q8IYW5 571 aaPredicted RBP4.31□□□□□ -1.72
CNOT4-202ENST00000356162 BEST2Q8NFU1 509 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 BCL7CQ8WUZ0 217 aaPredicted RBP4.31□□□□□ -1.72
CNOT4-202ENST00000356162 POF1BQ8WVV4 589 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 PPP2R3CQ969Q6 453 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 FBXL18Q96ME1 805 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 CBWD1Q9BRT8 395 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 CLSTN2Q9H4D0 955 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 ASB7Q9H672 318 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 NGRNQ9NPE2 291 aaKnown RBP4.31□□□□□ -1.72
CNOT4-202ENST00000356162 TLR9Q9NR96 1032 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 LMBRD1Q9NUN5 540 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 HSPBP1Q9NZL4 362 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 DNAJB4Q9UDY4 337 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 PUF60Q9UHX1 559 aaKnown RBP4.31□□□□□ -1.72
CNOT4-202ENST00000356162 MAN1B1Q9UKM7 699 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 PRG3Q9Y2Y8 225 aaPredicted RBP4.31□□□□□ -1.72
CNOT4-202ENST00000356162 C2CD2Q9Y426 696 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 SF3B1O75533 1304 aaKnown RBP eCLIP4.31□□□□□ -1.726e-8■■■■■ 47.8
CNOT4-202ENST00000356162 VWA8A3KMH1 1905 aa4.31□□□□□ -1.72
CNOT4-202ENST00000356162 CASTOR2A6NHX0 329 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 LACTBL1A8MY62 500 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 PODXLO00592 558 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 PDXKO00764 312 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 TGFB1I1O43294 461 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 EFEMP2O95967 443 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 MBD3O95983 291 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 SOD2P04179 222 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 CTSAP10619 480 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 IGFBP4P22692 258 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 RPL9P32969 192 aaKnown RBP4.3□□□□□ -1.72
CNOT4-202ENST00000356162 PBX3P40426 434 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 CREMQ03060 361 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 ENPEPQ07075 957 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 STIM1Q13586 685 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 TMEM132DQ14C87 1099 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 GLRA4Q5JXX5 417 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 ZNF658Q5TYW1 1059 aaPredicted RBP4.3□□□□□ -1.72
CNOT4-202ENST00000356162 FUT10Q6P4F1 479 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 CRELD2Q6UXH1 353 aaPredicted RBP4.3□□□□□ -1.72
CNOT4-202ENST00000356162 SLC9A9Q8IVB4 645 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 TRIML1Q8N9V2 468 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 XXYLT1Q8NBI6 393 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 MAFAQ8NHW3 353 aaPredicted RBP4.3□□□□□ -1.72
CNOT4-202ENST00000356162 SAAL1Q96ER3 474 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 ZMAT2Q96NC0 199 aaKnown RBP4.3□□□□□ -1.72
CNOT4-202ENST00000356162 CDCA3Q99618 268 aaPredicted RBP4.3□□□□□ -1.72
CNOT4-202ENST00000356162 FAM213AQ9BRX8 229 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 IKZF4Q9H2S9 585 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 KCTD10Q9H3F6 313 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 ENTPD7Q9NQZ7 604 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 RBAKQ9NYW8 714 aaPredicted RBP4.3□□□□□ -1.72
CNOT4-202ENST00000356162 ADAM28Q9UKQ2 775 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 TRAF3IP3Q9Y228 551 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 SSX2IPQ9Y2D8 614 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 PCDHA5Q9Y5H7 936 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 MAPK13O15264 365 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 NCK2O43639 380 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 MAN1A2O60476 641 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 GPR37L1O60883 481 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 KIF4AO95239 1232 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 NR3C1P04150 777 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 ALDH2P05091 517 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 URODP06132 367 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 NFICP08651 508 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 FBXO45P0C2W1 286 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 PTMSP20962 102 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 DNAJB1P25685 340 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 GLUD2P49448 558 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 ACOT2P49753 483 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 CYP2J2P51589 502 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 SOX4Q06945 474 aaPredicted RBP4.3□□□□□ -1.72
CNOT4-202ENST00000356162 CYP24A1Q07973 514 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 COL19A1Q14993 1142 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 PSMD6Q15008 389 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 EDRF1Q3B7T1 1238 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 ZCWPW2Q504Y3 356 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 SEZ6Q53EL9 994 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 SPATA1Q5VX52 437 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 PLPP4Q5VZY2 271 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 JADE1Q6IE81 842 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 PDXDC1Q6P996 788 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 DCLRE1AQ6PJP8 1040 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 FOXR2Q6PJQ5 311 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms