RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 THEMISQ8N1K5 641 aaPredicted RBP9.42□□□□□ -0.9
VPS33B-207ENST00000557470 MIER1Q8N108 512 aa9.41□□□□□ -0.9
VPS33B-207ENST00000557470 NCOA2Q15596 1464 aa9.4□□□□□ -0.9
VPS33B-207ENST00000557470 IQGAP1P46940 1657 aa9.4□□□□□ -0.9
VPS33B-207ENST00000557470 RSPH4AQ5TD94 716 aa9.39□□□□□ -0.91
VPS33B-207ENST00000557470 ABCC3O15438 1527 aa9.39□□□□□ -0.91
VPS33B-207ENST00000557470 LRRC7Q96NW7 1537 aa9.39□□□□□ -0.91
VPS33B-207ENST00000557470 STRCP1A6NGW2 1772 aa9.39□□□□□ -0.91
VPS33B-207ENST00000557470 RNF17Q9BXT8 1623 aaKnown RBP9.38□□□□□ -0.91
VPS33B-207ENST00000557470 ARHGEF5Q12774 1597 aa9.38□□□□□ -0.91
VPS33B-207ENST00000557470 ZNF579Q8NAF0 562 aaKnown RBP9.38□□□□□ -0.91
VPS33B-207ENST00000557470 SYNMO15061 1565 aa9.37□□□□□ -0.91
VPS33B-207ENST00000557470 ERVK-7P63135 1459 aa9.37□□□□□ -0.91
VPS33B-207ENST00000557470 ZC3H13Q5T200 1668 aaKnown RBP9.36□□□□□ -0.91
VPS33B-207ENST00000557470 TSPY4P0CV99 314 aa9.36□□□□□ -0.91
VPS33B-207ENST00000557470 TSPY10P0CW01 314 aa9.36□□□□□ -0.91
VPS33B-207ENST00000557470 MROH1Q8NDA8 1641 aa9.35□□□□□ -0.91
VPS33B-207ENST00000557470 PHF12Q96QT6 1004 aa9.35□□□□□ -0.91
VPS33B-207ENST00000557470 SCAF11Q99590 1463 aaKnown RBP9.34□□□□□ -0.91
VPS33B-207ENST00000557470 MAST1Q9Y2H9 1570 aa9.34□□□□□ -0.91
VPS33B-207ENST00000557470 PLCD3Q8N3E9 789 aa9.34□□□□□ -0.91
VPS33B-207ENST00000557470 EIF2AK4Q9P2K8 1649 aaKnown RBP9.34□□□□□ -0.91
VPS33B-207ENST00000557470 UBR1Q8IWV7 1749 aa9.34□□□□□ -0.92
VPS33B-207ENST00000557470 PAK3O75914 559 aaPredicted RBP9.33□□□□□ -0.92
VPS33B-207ENST00000557470 RGS17Q9UGC6 210 aaPredicted RBP9.33□□□□□ -0.92
VPS33B-207ENST00000557470 CEP152O94986 1710 aa9.33□□□□□ -0.92
VPS33B-207ENST00000557470 SLIT1O75093 1534 aa9.32□□□□□ -0.92
VPS33B-207ENST00000557470 POTEIP0CG38 1075 aa9.32□□□□□ -0.92
VPS33B-207ENST00000557470 LTKP29376 864 aa9.32□□□□□ -0.92
VPS33B-207ENST00000557470 LRRC9Q6ZRR7 1453 aa9.32□□□□□ -0.92
VPS33B-207ENST00000557470 ARHGAP23Q9P227 1491 aa9.32□□□□□ -0.92
VPS33B-207ENST00000557470 PLEKHG5O94827 1062 aa9.31□□□□□ -0.92
VPS33B-207ENST00000557470 TXNDC2Q86VQ3 553 aa9.31□□□□□ -0.92
VPS33B-207ENST00000557470 TSPYL2Q9H2G4 693 aaPredicted RBP9.31□□□□□ -0.92
VPS33B-207ENST00000557470 XIRP1Q702N8 1843 aaKnown RBP9.31□□□□□ -0.92
VPS33B-207ENST00000557470 GALR2O43603 387 aaPredicted RBP9.3□□□□□ -0.92
VPS33B-207ENST00000557470 PRDM15P57071 1507 aaPredicted RBP9.3□□□□□ -0.92
VPS33B-207ENST00000557470 DUOX2Q9NRD8 1548 aa9.3□□□□□ -0.92
VPS33B-207ENST00000557470 CFAP65Q6ZU64 1925 aaKnown RBP9.29□□□□□ -0.92
VPS33B-207ENST00000557470 PRKCSHP14314 528 aaPredicted RBP9.29□□□□□ -0.92
VPS33B-207ENST00000557470 ARHGAP31Q2M1Z3 1444 aa9.29□□□□□ -0.92
VPS33B-207ENST00000557470 MYOM3Q5VTT5 1437 aa9.29□□□□□ -0.92
VPS33B-207ENST00000557470 TMEM2Q9UHN6 1383 aa9.28□□□□□ -0.92
VPS33B-207ENST00000557470 CLCN6P51797 869 aa9.28□□□□□ -0.92
VPS33B-207ENST00000557470 KANK4Q5T7N3 995 aaPredicted RBP9.28□□□□□ -0.92
VPS33B-207ENST00000557470 RASEFQ8IZ41 740 aa9.28□□□□□ -0.92
VPS33B-207ENST00000557470 DAXXQ9UER7 740 aaPredicted RBP9.28□□□□□ -0.92
VPS33B-207ENST00000557470 EID1Q9Y6B2 187 aa9.28□□□□□ -0.92
VPS33B-207ENST00000557470 FAM135BQ49AJ0 1406 aa9.28□□□□□ -0.92
VPS33B-207ENST00000557470 VPS8Q8N3P4 1428 aa9.28□□□□□ -0.92
VPS33B-207ENST00000557470 PIK3C2BO00750 1634 aa9.27□□□□□ -0.92
VPS33B-207ENST00000557470 TMEM94Q12767 1356 aa9.27□□□□□ -0.93
VPS33B-207ENST00000557470 KIF15Q9NS87 1388 aa9.27□□□□□ -0.93
VPS33B-207ENST00000557470 ERBINQ96RT1 1412 aa9.27□□□□□ -0.93
VPS33B-207ENST00000557470 POTEAQ6S8J7 498 aa9.26□□□□□ -0.93
VPS33B-207ENST00000557470 FBXO3Q9UK99 471 aa9.26□□□□□ -0.93
VPS33B-207ENST00000557470 MAP3K1Q13233 1512 aa9.26□□□□□ -0.93
VPS33B-207ENST00000557470 BCANQ96GW7 911 aa9.25□□□□□ -0.93
VPS33B-207ENST00000557470 RRP7BPQ9NSQ0 103 aa9.25□□□□□ -0.93
VPS33B-207ENST00000557470 CCDC61Q9Y6R9 512 aa9.25□□□□□ -0.93
VPS33B-207ENST00000557470 ROBO1Q9Y6N7 1651 aa9.25□□□□□ -0.93
VPS33B-207ENST00000557470 EFCAB6Q5THR3 1501 aa9.25□□□□□ -0.93
VPS33B-207ENST00000557470 ABCC5O15440 1437 aa9.24□□□□□ -0.93
VPS33B-207ENST00000557470 CROCC2H7BZ55 1655 aa9.24□□□□□ -0.93
VPS33B-207ENST00000557470 KCNA6P17658 529 aa9.24□□□□□ -0.93
VPS33B-207ENST00000557470 RBM33Q96EV2 1170 aaKnown RBP9.24□□□□□ -0.93
VPS33B-207ENST00000557470 SLC26A8Q96RN1 970 aa9.24□□□□□ -0.93
VPS33B-207ENST00000557470 TET3O43151 1660 aa9.23□□□□□ -0.93
VPS33B-207ENST00000557470 KDM5AP29375 1690 aaKnown RBP9.23□□□□□ -0.93
VPS33B-207ENST00000557470 IDI1Q13907 227 aa9.23□□□□□ -0.93
VPS33B-207ENST00000557470 PROSER2Q86WR7 435 aaPredicted RBP9.23□□□□□ -0.93
VPS33B-207ENST00000557470 DCBLD2Q96PD2 775 aa9.23□□□□□ -0.93
VPS33B-207ENST00000557470 KANK1Q14678 1352 aa9.23□□□□□ -0.93
VPS33B-207ENST00000557470 LMTK2Q8IWU2 1503 aa9.22□□□□□ -0.93
VPS33B-207ENST00000557470 NWD1Q149M9 1564 aa9.22□□□□□ -0.93
VPS33B-207ENST00000557470 NUBP1P53384 320 aa9.22□□□□□ -0.93
VPS33B-207ENST00000557470 DAPK1P53355 1430 aa9.22□□□□□ -0.93
VPS33B-207ENST00000557470 NKTRP30414 1462 aaKnown RBP9.21□□□□□ -0.93
VPS33B-207ENST00000557470 ADGRB3O60242 1522 aa9.21□□□□□ -0.93
VPS33B-207ENST00000557470 PTPN23Q9H3S7 1636 aa9.21□□□□□ -0.93
VPS33B-207ENST00000557470 MS4A3Q96HJ5 214 aa9.21□□□□□ -0.94
VPS33B-207ENST00000557470 NOS1P29475 1434 aa9.21□□□□□ -0.94
VPS33B-207ENST00000557470 SETD1AO15047 1707 aaKnown RBP9.2□□□□□ -0.94
VPS33B-207ENST00000557470 VASPP50552 380 aaPredicted RBP9.2□□□□□ -0.94
VPS33B-207ENST00000557470 PLCB2Q00722 1185 aa9.2□□□□□ -0.94
VPS33B-207ENST00000557470 ZBTB47Q9UFB7 747 aaPredicted RBP9.2□□□□□ -0.94
VPS33B-207ENST00000557470 TAOK2Q9UL54 1235 aa9.2□□□□□ -0.94
VPS33B-207ENST00000557470 MSH6P52701 1360 aa9.2□□□□□ -0.94
VPS33B-207ENST00000557470 LOC105371045A0A1W2PR82 267 aa9.19□□□□□ -0.94
VPS33B-207ENST00000557470 SLAIN2Q9P270 581 aa9.19□□□□□ -0.94
VPS33B-207ENST00000557470 CHIC2Q9UKJ5 165 aa9.19□□□□□ -0.94
VPS33B-207ENST00000557470 PHLPP1O60346 1717 aa9.19□□□□□ -0.94
VPS33B-207ENST00000557470 FGD6Q6ZV73 1430 aa9.18□□□□□ -0.94
VPS33B-207ENST00000557470 KIF12Q96FN5 646 aa9.18□□□□□ -0.94
VPS33B-207ENST00000557470 ANKRD30AQ9BXX3 1397 aa9.18□□□□□ -0.94
VPS33B-207ENST00000557470 JCADQ9P266 1359 aa9.18□□□□□ -0.94
VPS33B-207ENST00000557470 ZFYVE9O95405 1425 aa9.17□□□□□ -0.94
VPS33B-207ENST00000557470 SLC52A1Q9NWF4 448 aa9.17□□□□□ -0.94
VPS33B-207ENST00000557470 LRP6O75581 1613 aa9.16□□□□□ -0.94
VPS33B-207ENST00000557470 COL16A1Q07092 1604 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms